RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 RAB3GAP2Q9H2M9 1393 aa7.72□□□□□ -1.17
PRDM2-206ENST00000413440 ABCC5O15440 1437 aa7.71□□□□□ -1.18
PRDM2-206ENST00000413440 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.18
PRDM2-206ENST00000413440 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
PRDM2-206ENST00000413440 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRDM2-206ENST00000413440 FBXO41Q8TF61 875 aa7.7□□□□□ -1.18
PRDM2-206ENST00000413440 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
PRDM2-206ENST00000413440 AMPHP49418 695 aa7.7□□□□□ -1.18
PRDM2-206ENST00000413440 ABCA9Q8IUA7 1624 aa7.7□□□□□ -1.18
PRDM2-206ENST00000413440 MAGI2Q86UL8 1455 aa7.7□□□□□ -1.18
PRDM2-206ENST00000413440 EIF3AQ14152 1382 aaKnown RBP7.69□□□□□ -1.18
PRDM2-206ENST00000413440 CDCA8Q53HL2 280 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 KIAA1107Q9UPP5 1409 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 SALL2Q9Y467 1007 aaPredicted RBP7.69□□□□□ -1.18
PRDM2-206ENST00000413440 CADPS2Q86UW7 1296 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 ABTB2Q8N961 1025 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 RIMS2Q9UQ26 1411 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 WAPLQ7Z5K2 1190 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 KIF13AQ9H1H9 1805 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 SAMD9LQ8IVG5 1584 aa7.69□□□□□ -1.18
PRDM2-206ENST00000413440 MADDQ8WXG6 1647 aa7.68□□□□□ -1.18
PRDM2-206ENST00000413440 FAM9BQ8IZU0 186 aa7.68□□□□□ -1.18
PRDM2-206ENST00000413440 FER1L4A9Z1Z3 1794 aa7.68□□□□□ -1.18
PRDM2-206ENST00000413440 PREX2Q70Z35 1606 aa7.68□□□□□ -1.18
PRDM2-206ENST00000413440 CANXP27824 592 aaKnown RBP7.68□□□□□ -1.18
PRDM2-206ENST00000413440 TMF1P82094 1093 aa7.68□□□□□ -1.18
PRDM2-206ENST00000413440 CLTCQ00610 1675 aaKnown RBP7.68□□□□□ -1.18
PRDM2-206ENST00000413440 ZNF330Q9Y3S2 320 aaPredicted RBP7.68□□□□□ -1.18
PRDM2-206ENST00000413440 NPHP4O75161 1426 aaPredicted RBP7.67□□□□□ -1.18
PRDM2-206ENST00000413440 PDE3BQ13370 1112 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 CABP2Q9NPB3 220 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 CLSTN1O94985 981 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 NEUROD2Q15784 382 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 ARAP3Q8WWN8 1544 aa7.67□□□□□ -1.18
PRDM2-206ENST00000413440 RRBP1Q9P2E9 1410 aaKnown RBP7.67□□□□□ -1.18
PRDM2-206ENST00000413440 FOXO3O43524 673 aa7.66□□□□□ -1.18
PRDM2-206ENST00000413440 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
PRDM2-206ENST00000413440 DDX17Q92841 729 aaKnown RBP7.66□□□□□ -1.18
PRDM2-206ENST00000413440 KNSTRNQ9Y448 316 aa7.66□□□□□ -1.18
PRDM2-206ENST00000413440 ABCC1P33527 1531 aa7.66□□□□□ -1.18
PRDM2-206ENST00000413440 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
PRDM2-206ENST00000413440 KDM5DQ9BY66 1539 aa7.65□□□□□ -1.18
PRDM2-206ENST00000413440 HSPA1LP34931 641 aa7.65□□□□□ -1.18
PRDM2-206ENST00000413440 CC2D1BQ5T0F9 858 aaKnown RBP7.65□□□□□ -1.18
PRDM2-206ENST00000413440 EVC2Q86UK5 1308 aa7.65□□□□□ -1.18
PRDM2-206ENST00000413440 CNKSR2Q8WXI2 1034 aa7.65□□□□□ -1.18
PRDM2-206ENST00000413440 KRT28Q7Z3Y7 464 aa7.65□□□□□ -1.19
PRDM2-206ENST00000413440 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.19
PRDM2-206ENST00000413440 RTEL1-TNFRSF6BF6WH68 1400 aa7.65□□□□□ -1.19
PRDM2-206ENST00000413440 TOM1L2Q6ZVM7 507 aa7.65□□□□□ -1.19
PRDM2-206ENST00000413440 PRDM11Q9NQV5 511 aa7.65□□□□□ -1.19
PRDM2-206ENST00000413440 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
PRDM2-206ENST00000413440 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
PRDM2-206ENST00000413440 ARHGEF40Q8TER5 1519 aa7.64□□□□□ -1.19
PRDM2-206ENST00000413440 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
PRDM2-206ENST00000413440 COL17A1Q9UMD9 1497 aaPredicted RBP7.64□□□□□ -1.19
PRDM2-206ENST00000413440 CDK19Q9BWU1 502 aa7.64□□□□□ -1.19
PRDM2-206ENST00000413440 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
PRDM2-206ENST00000413440 NLRP6P59044 892 aa7.63□□□□□ -1.19
PRDM2-206ENST00000413440 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
PRDM2-206ENST00000413440 MIER1Q8N108 512 aa7.63□□□□□ -1.19
PRDM2-206ENST00000413440 CAMSAP1Q5T5Y3 1602 aa7.63□□□□□ -1.19
PRDM2-206ENST00000413440 KCNA6P17658 529 aa7.63□□□□□ -1.19
PRDM2-206ENST00000413440 SLAIN2Q9P270 581 aa7.63□□□□□ -1.19
PRDM2-206ENST00000413440 COG3Q96JB2 828 aa7.62□□□□□ -1.19
PRDM2-206ENST00000413440 LRRC59Q96AG4 307 aaKnown RBP7.62□□□□□ -1.19
PRDM2-206ENST00000413440 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
PRDM2-206ENST00000413440 MORC1Q86VD1 984 aa7.62□□□□□ -1.19
PRDM2-206ENST00000413440 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
PRDM2-206ENST00000413440 LTKP29376 864 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 RPGRIP1LQ68CZ1 1315 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 NOS1P29475 1434 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 USP21Q9UK80 565 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 CDC42BPAQ5VT25 1732 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 G3V3G9 751 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 RXRBP28702 533 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 DCAF8Q5TAQ9 597 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 CWC22Q9HCG8 908 aaKnown RBP7.61□□□□□ -1.19
PRDM2-206ENST00000413440 MLH3Q9UHC1 1453 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 CFAP53Q96M91 514 aa7.61□□□□□ -1.19
PRDM2-206ENST00000413440 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
PRDM2-206ENST00000413440 CABLES1Q8TDN4 633 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 L3MBTL2Q969R5 705 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 PHF8Q9UPP1 1060 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 PTPRKQ15262 1439 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 ADGBQ8N7X0 1667 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 ZNF772Q68DY9 489 aaPredicted RBP7.6□□□□□ -1.19
PRDM2-206ENST00000413440 CDC42BPBQ9Y5S2 1711 aa7.6□□□□□ -1.19
PRDM2-206ENST00000413440 TMEM94Q12767 1356 aa7.59□□□□□ -1.19
PRDM2-206ENST00000413440 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
PRDM2-206ENST00000413440 QTRT2Q9H974 415 aaKnown RBP7.59□□□□□ -1.19
PRDM2-206ENST00000413440 CENPJQ9HC77 1338 aaPredicted RBP7.59□□□□□ -1.19
PRDM2-206ENST00000413440 SCAF11Q99590 1463 aaKnown RBP7.59□□□□□ -1.19
PRDM2-206ENST00000413440 ARHGEF12Q9NZN5 1544 aa7.59□□□□□ -1.19
PRDM2-206ENST00000413440 NCOA1Q15788 1441 aa7.59□□□□□ -1.19
PRDM2-206ENST00000413440 ABCA6Q8N139 1617 aa7.58□□□□□ -1.2
PRDM2-206ENST00000413440 NLRP13Q86W25 1043 aa7.58□□□□□ -1.2
PRDM2-206ENST00000413440 ADGRF5Q8IZF2 1346 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 CHRNA2Q15822 529 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms