RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 IQGAP3Q86VI3 1631 aa15.25■□□□□ 0.03
NCKIPSD-202ENST00000413374 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
NCKIPSD-202ENST00000413374 CPS1P31327 1500 aa15.24■□□□□ 0.03
NCKIPSD-202ENST00000413374 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
NCKIPSD-202ENST00000413374 E9PCH4 1651 aa15.23■□□□□ 0.03
NCKIPSD-202ENST00000413374 KCNA6P17658 529 aa15.23■□□□□ 0.03
NCKIPSD-202ENST00000413374 PROSER2Q86WR7 435 aaPredicted RBP15.22■□□□□ 0.03
NCKIPSD-202ENST00000413374 GCC2Q8IWJ2 1684 aa15.21■□□□□ 0.03
NCKIPSD-202ENST00000413374 LRRC7Q96NW7 1537 aa15.21■□□□□ 0.03
NCKIPSD-202ENST00000413374 ZFYVE9O95405 1425 aa15.2■□□□□ 0.02
NCKIPSD-202ENST00000413374 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
NCKIPSD-202ENST00000413374 HSPA1LP34931 641 aa15.18■□□□□ 0.02
NCKIPSD-202ENST00000413374 MPHOSPH9Q99550 1183 aa15.18■□□□□ 0.02
NCKIPSD-202ENST00000413374 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
NCKIPSD-202ENST00000413374 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
NCKIPSD-202ENST00000413374 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
NCKIPSD-202ENST00000413374 TMEM94Q12767 1356 aa15.16■□□□□ 0.02
NCKIPSD-202ENST00000413374 KDM5AP29375 1690 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-202ENST00000413374 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
NCKIPSD-202ENST00000413374 SETD5Q9C0A6 1442 aa15.13■□□□□ 0.01
NCKIPSD-202ENST00000413374 AMOTL2Q9Y2J4 779 aa15.13■□□□□ 0.01
NCKIPSD-202ENST00000413374 ADAMTS13Q76LX8 1427 aa15.12■□□□□ 0.01
NCKIPSD-202ENST00000413374 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
NCKIPSD-202ENST00000413374 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
NCKIPSD-202ENST00000413374 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
NCKIPSD-202ENST00000413374 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
NCKIPSD-202ENST00000413374 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
NCKIPSD-202ENST00000413374 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
NCKIPSD-202ENST00000413374 TRPM2O94759 1503 aa15.08■□□□□ 0.01
NCKIPSD-202ENST00000413374 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
NCKIPSD-202ENST00000413374 ALKQ9UM73 1620 aa15.07■□□□□ 0
NCKIPSD-202ENST00000413374 METP08581 1390 aa15.07■□□□□ 0
NCKIPSD-202ENST00000413374 PTPRUQ92729 1446 aa15.07■□□□□ 0
NCKIPSD-202ENST00000413374 MSH6P52701 1360 aa15.06■□□□□ 0
NCKIPSD-202ENST00000413374 SLAIN2Q9P270 581 aa15.05■□□□□ -0
NCKIPSD-202ENST00000413374 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ -0
NCKIPSD-202ENST00000413374 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
NCKIPSD-202ENST00000413374 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
NCKIPSD-202ENST00000413374 PIK3R4Q99570 1358 aa15.03■□□□□ -0
NCKIPSD-202ENST00000413374 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
NCKIPSD-202ENST00000413374 ADGRF5Q8IZF2 1346 aa15.02■□□□□ -0
NCKIPSD-202ENST00000413374 ATF3P18847 181 aa15.02■□□□□ -0
NCKIPSD-202ENST00000413374 ILDR2Q71H61 639 aa15.02■□□□□ -0
NCKIPSD-202ENST00000413374 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
NCKIPSD-202ENST00000413374 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-202ENST00000413374 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
NCKIPSD-202ENST00000413374 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
NCKIPSD-202ENST00000413374 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-202ENST00000413374 STK26Q9P289 416 aa14.99□□□□□ -0.01
NCKIPSD-202ENST00000413374 CADPS2Q86UW7 1296 aa14.98□□□□□ -0.01
NCKIPSD-202ENST00000413374 CHD2O14647 1828 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-202ENST00000413374 DIP2AQ14689 1571 aa14.98□□□□□ -0.01
NCKIPSD-202ENST00000413374 SETBP1Q9Y6X0 1596 aa14.98□□□□□ -0.01
NCKIPSD-202ENST00000413374 NRXN3Q9Y4C0 1643 aa14.97□□□□□ -0.01
NCKIPSD-202ENST00000413374 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
NCKIPSD-202ENST00000413374 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
NCKIPSD-202ENST00000413374 NCOA3Q9Y6Q9 1424 aa14.96□□□□□ -0.01
NCKIPSD-202ENST00000413374 KIF1BO60333 1816 aa14.96□□□□□ -0.01
NCKIPSD-202ENST00000413374 HRCP23327 699 aa14.95□□□□□ -0.02
NCKIPSD-202ENST00000413374 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
NCKIPSD-202ENST00000413374 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-202ENST00000413374 ANKRD30BQ9BXX2 1392 aa14.93□□□□□ -0.02
NCKIPSD-202ENST00000413374 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
NCKIPSD-202ENST00000413374 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
NCKIPSD-202ENST00000413374 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
NCKIPSD-202ENST00000413374 WAPLQ7Z5K2 1190 aa14.92□□□□□ -0.02
NCKIPSD-202ENST00000413374 DDX17Q92841 729 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-202ENST00000413374 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
NCKIPSD-202ENST00000413374 ROBO1Q9Y6N7 1651 aa14.9□□□□□ -0.02
NCKIPSD-202ENST00000413374 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
NCKIPSD-202ENST00000413374 C14orf93Q9H972 538 aaKnown RBP14.88□□□□□ -0.03
NCKIPSD-202ENST00000413374 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
NCKIPSD-202ENST00000413374 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.87□□□□□ -0.03
NCKIPSD-202ENST00000413374 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
NCKIPSD-202ENST00000413374 ORAI2Q96SN7 254 aa14.87□□□□□ -0.03
NCKIPSD-202ENST00000413374 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
NCKIPSD-202ENST00000413374 PPLO60437 1756 aa14.85□□□□□ -0.03
NCKIPSD-202ENST00000413374 MST1RQ04912 1400 aa14.85□□□□□ -0.03
NCKIPSD-202ENST00000413374 SAFB2Q14151 953 aaKnown RBP eCLIP14.85□□□□□ -0.03
NCKIPSD-202ENST00000413374 LRPPRCP42704 1394 aaKnown RBP14.85□□□□□ -0.03
NCKIPSD-202ENST00000413374 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
NCKIPSD-202ENST00000413374 PIK3C2GO75747 1445 aa14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 PTCH1Q13635 1447 aa14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 NUTM2BA6NNL0 878 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 NUTM2EB1AL46 878 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 NUTM2AQ8IVF1 878 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 RGS17Q9UGC6 210 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 JCADQ9P266 1359 aa14.84□□□□□ -0.03
NCKIPSD-202ENST00000413374 DCCP43146 1447 aa14.83□□□□□ -0.03
NCKIPSD-202ENST00000413374 DHX57Q6P158 1386 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-202ENST00000413374 ABCC11Q96J66 1382 aa14.83□□□□□ -0.04
NCKIPSD-202ENST00000413374 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
NCKIPSD-202ENST00000413374 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
NCKIPSD-202ENST00000413374 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-202ENST00000413374 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
NCKIPSD-202ENST00000413374 SOCS7O14512 581 aa14.81□□□□□ -0.04
NCKIPSD-202ENST00000413374 MEX3CQ5U5Q3 659 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-202ENST00000413374 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
NCKIPSD-202ENST00000413374 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
NCKIPSD-202ENST00000413374 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms