RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
CPSF7-203ENST00000413184 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-203ENST00000413184 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
CPSF7-203ENST00000413184 MAST1Q9Y2H9 1570 aa12.35□□□□□ -0.43
CPSF7-203ENST00000413184 SPHKAPQ2M3C7 1700 aa12.35□□□□□ -0.43
CPSF7-203ENST00000413184 ATF3P18847 181 aa12.35□□□□□ -0.43
CPSF7-203ENST00000413184 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
CPSF7-203ENST00000413184 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-203ENST00000413184 SLIT1O75093 1534 aa12.35□□□□□ -0.43
CPSF7-203ENST00000413184 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
CPSF7-203ENST00000413184 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
CPSF7-203ENST00000413184 PREX2Q70Z35 1606 aa12.33□□□□□ -0.43
CPSF7-203ENST00000413184 HSPA6P17066 643 aa12.33□□□□□ -0.44
CPSF7-203ENST00000413184 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-203ENST00000413184 INO80Q9ULG1 1556 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-203ENST00000413184 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
CPSF7-203ENST00000413184 MROH1Q8NDA8 1641 aa12.3□□□□□ -0.44
CPSF7-203ENST00000413184 CLIP1P30622 1438 aa12.3□□□□□ -0.44
CPSF7-203ENST00000413184 ZNF777Q9ULD5 760 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-203ENST00000413184 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-203ENST00000413184 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CPSF7-203ENST00000413184 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
CPSF7-203ENST00000413184 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-203ENST00000413184 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
CPSF7-203ENST00000413184 KCNQ2O43526 872 aa12.28□□□□□ -0.44
CPSF7-203ENST00000413184 TROQ12816 1431 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-203ENST00000413184 KIF3BO15066 747 aa12.27□□□□□ -0.45
CPSF7-203ENST00000413184 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
CPSF7-203ENST00000413184 SEPT12Q8IYM1 358 aa12.27□□□□□ -0.45
CPSF7-203ENST00000413184 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
CPSF7-203ENST00000413184 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
CPSF7-203ENST00000413184 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
CPSF7-203ENST00000413184 GPATCH8Q9UKJ3 1502 aaKnown RBP12.26□□□□□ -0.45
CPSF7-203ENST00000413184 EZH2Q15910 746 aaKnown RBP12.25□□□□□ -0.45
CPSF7-203ENST00000413184 BCANQ96GW7 911 aa12.25□□□□□ -0.45
CPSF7-203ENST00000413184 GLI3P10071 1580 aa12.25□□□□□ -0.45
CPSF7-203ENST00000413184 TET3O43151 1660 aa12.24□□□□□ -0.45
CPSF7-203ENST00000413184 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
CPSF7-203ENST00000413184 ARHGAP35Q9NRY4 1499 aa12.24□□□□□ -0.45
CPSF7-203ENST00000413184 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
CPSF7-203ENST00000413184 TMEM2Q9UHN6 1383 aa12.23□□□□□ -0.45
CPSF7-203ENST00000413184 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
CPSF7-203ENST00000413184 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
CPSF7-203ENST00000413184 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
CPSF7-203ENST00000413184 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.46
CPSF7-203ENST00000413184 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
CPSF7-203ENST00000413184 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
CPSF7-203ENST00000413184 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
CPSF7-203ENST00000413184 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
CPSF7-203ENST00000413184 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
CPSF7-203ENST00000413184 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
CPSF7-203ENST00000413184 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
CPSF7-203ENST00000413184 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
CPSF7-203ENST00000413184 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
CPSF7-203ENST00000413184 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
CPSF7-203ENST00000413184 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
CPSF7-203ENST00000413184 PPP1R15AO75807 674 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-203ENST00000413184 A0A0G2JS52 829 aa12.16□□□□□ -0.46
CPSF7-203ENST00000413184 MYT1Q01538 1121 aa12.16□□□□□ -0.46
CPSF7-203ENST00000413184 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
CPSF7-203ENST00000413184 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
CPSF7-203ENST00000413184 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
CPSF7-203ENST00000413184 CAMKK2Q96RR4 588 aa12.15□□□□□ -0.46
CPSF7-203ENST00000413184 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
CPSF7-203ENST00000413184 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
CPSF7-203ENST00000413184 PIK3C2BO00750 1634 aa12.12□□□□□ -0.47
CPSF7-203ENST00000413184 APLP1P51693 650 aa12.12□□□□□ -0.47
CPSF7-203ENST00000413184 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
CPSF7-203ENST00000413184 ADGRB2O60241 1585 aa12.12□□□□□ -0.47
CPSF7-203ENST00000413184 MST1RQ04912 1400 aa12.11□□□□□ -0.47
CPSF7-203ENST00000413184 MYOM1P52179 1685 aa12.11□□□□□ -0.47
CPSF7-203ENST00000413184 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
CPSF7-203ENST00000413184 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
CPSF7-203ENST00000413184 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-203ENST00000413184 DCCP43146 1447 aa12.11□□□□□ -0.47
CPSF7-203ENST00000413184 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
CPSF7-203ENST00000413184 GPR162Q16538 588 aa12.1□□□□□ -0.47
CPSF7-203ENST00000413184 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
CPSF7-203ENST00000413184 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
CPSF7-203ENST00000413184 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
CPSF7-203ENST00000413184 COL22A1Q8NFW1 1626 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-203ENST00000413184 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-203ENST00000413184 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
CPSF7-203ENST00000413184 DLC1Q96QB1 1528 aa12.08□□□□□ -0.48
CPSF7-203ENST00000413184 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
CPSF7-203ENST00000413184 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-203ENST00000413184 MYOM2P54296 1465 aa12.08□□□□□ -0.48
CPSF7-203ENST00000413184 RREB1Q92766 1687 aa12.07□□□□□ -0.48
CPSF7-203ENST00000413184 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
CPSF7-203ENST00000413184 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
CPSF7-203ENST00000413184 APBA3O96018 575 aa12.06□□□□□ -0.48
CPSF7-203ENST00000413184 SLIT2O94813 1529 aa12.06□□□□□ -0.48
CPSF7-203ENST00000413184 TNS2Q63HR2 1409 aa12.05□□□□□ -0.48
CPSF7-203ENST00000413184 SOS2Q07890 1332 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-203ENST00000413184 VPS72Q15906 364 aa12.04□□□□□ -0.48
CPSF7-203ENST00000413184 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
CPSF7-203ENST00000413184 TRIM37O94972 964 aa12.03□□□□□ -0.48
CPSF7-203ENST00000413184 ZBTB7AO95365 584 aa12.02□□□□□ -0.49
CPSF7-203ENST00000413184 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-203ENST00000413184 CEP152O94986 1710 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms