RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 SLC52A1Q9NWF4 448 aa29.35■■■□□ 2.29
TNRC18-204ENST00000413081 POTEAQ6S8J7 498 aa29.33■■■□□ 2.29
TNRC18-204ENST00000413081 PHLPP1O60346 1717 aa29.3■■■□□ 2.28
TNRC18-204ENST00000413081 RPRD2Q5VT52 1461 aaKnown RBP29.29■■■□□ 2.28
TNRC18-204ENST00000413081 ADGRL2O95490 1459 aa29.28■■■□□ 2.28
TNRC18-204ENST00000413081 PPP1R15AO75807 674 aaPredicted RBP29.27■■■□□ 2.28
TNRC18-204ENST00000413081 GCC2Q8IWJ2 1684 aa29.26■■■□□ 2.27
TNRC18-204ENST00000413081 SLAIN2Q9P270 581 aa29.26■■■□□ 2.27
TNRC18-204ENST00000413081 MYO5BQ9ULV0 1848 aa29.26■■■□□ 2.27
TNRC18-204ENST00000413081 PLEKHG1Q9ULL1 1385 aa29.25■■■□□ 2.27
TNRC18-204ENST00000413081 CHD2O14647 1828 aaKnown RBP29.24■■■□□ 2.27
TNRC18-204ENST00000413081 HDGFP51858 240 aaKnown RBP29.24■■■□□ 2.27
TNRC18-204ENST00000413081 ZFYVE9O95405 1425 aa29.23■■■□□ 2.27
TNRC18-204ENST00000413081 JCADQ9P266 1359 aa29.23■■■□□ 2.27
TNRC18-204ENST00000413081 ANKRD50Q9ULJ7 1429 aa29.22■■■□□ 2.27
TNRC18-204ENST00000413081 RIMS2Q9UQ26 1411 aa29.22■■■□□ 2.27
TNRC18-204ENST00000413081 FAM50AQ14320 339 aaKnown RBP29.2■■■□□ 2.26
TNRC18-204ENST00000413081 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
TNRC18-204ENST00000413081 C14orf37Q86TY3 774 aa29.18■■■□□ 2.26
TNRC18-204ENST00000413081 TMEM131LA2VDJ0 1609 aa29.18■■■□□ 2.26
TNRC18-204ENST00000413081 CHGAP10645 457 aaKnown RBP29.15■■■□□ 2.26
TNRC18-204ENST00000413081 COL16A1Q07092 1604 aaPredicted RBP29.15■■■□□ 2.26
TNRC18-204ENST00000413081 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.14■■■□□ 2.26
TNRC18-204ENST00000413081 NCOA3Q9Y6Q9 1424 aa29.13■■■□□ 2.25
TNRC18-204ENST00000413081 TBX22Q9Y458 520 aa29.13■■■□□ 2.25
TNRC18-204ENST00000413081 MEX3CQ5U5Q3 659 aaKnown RBP29.1■■■□□ 2.25
TNRC18-204ENST00000413081 UNC13BO14795 1591 aa29.09■■■□□ 2.25
TNRC18-204ENST00000413081 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
TNRC18-204ENST00000413081 SPATA31A6Q5VVP1 1343 aa29.08■■■□□ 2.25
TNRC18-204ENST00000413081 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.25
TNRC18-204ENST00000413081 CADPS2Q86UW7 1296 aa29.07■■■□□ 2.24
TNRC18-204ENST00000413081 E9PCH4 1651 aa29.06■■■□□ 2.24
TNRC18-204ENST00000413081 ATF3P18847 181 aa29.06■■■□□ 2.24
TNRC18-204ENST00000413081 NUTM2DQ5VT03 806 aaPredicted RBP29.06■■■□□ 2.24
TNRC18-204ENST00000413081 ADAMTS13Q76LX8 1427 aa29.05■■■□□ 2.24
TNRC18-204ENST00000413081 LRP6O75581 1613 aa29.05■■■□□ 2.24
TNRC18-204ENST00000413081 AHDC1Q5TGY3 1603 aaPredicted RBP29.05■■■□□ 2.24
TNRC18-204ENST00000413081 PIK3R4Q99570 1358 aa29.04■■■□□ 2.24
TNRC18-204ENST00000413081 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
TNRC18-204ENST00000413081 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
TNRC18-204ENST00000413081 ZNF772Q68DY9 489 aaPredicted RBP29.02■■■□□ 2.24
TNRC18-204ENST00000413081 TRPM2O94759 1503 aa29.01■■■□□ 2.23
TNRC18-204ENST00000413081 IQGAP3Q86VI3 1631 aa28.99■■■□□ 2.23
TNRC18-204ENST00000413081 TRIM52Q96A61 297 aa28.96■■■□□ 2.23
TNRC18-204ENST00000413081 AMOTL2Q9Y2J4 779 aa28.95■■■□□ 2.22
TNRC18-204ENST00000413081 ROCK1Q13464 1354 aa28.92■■■□□ 2.22
TNRC18-204ENST00000413081 BRINP3Q76B58 766 aa28.92■■■□□ 2.22
TNRC18-204ENST00000413081 DCCP43146 1447 aa28.91■■■□□ 2.22
TNRC18-204ENST00000413081 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
TNRC18-204ENST00000413081 NUTM2BA6NNL0 878 aaPredicted RBP28.9■■■□□ 2.22
TNRC18-204ENST00000413081 NUTM2EB1AL46 878 aaPredicted RBP28.9■■■□□ 2.22
TNRC18-204ENST00000413081 NUTM2AQ8IVF1 878 aaPredicted RBP28.9■■■□□ 2.22
TNRC18-204ENST00000413081 NUP155O75694 1391 aa28.89■■■□□ 2.22
TNRC18-204ENST00000413081 UPF1Q92900 1129 aaKnown RBP eCLIP28.89■■■□□ 2.22
TNRC18-204ENST00000413081 RXRBP28702 533 aa28.88■■■□□ 2.21
TNRC18-204ENST00000413081 ASXL1Q8IXJ9 1541 aa28.87■■■□□ 2.21
TNRC18-204ENST00000413081 XRN1Q8IZH2 1706 aaKnown RBP28.86■■■□□ 2.21
TNRC18-204ENST00000413081 SETBP1Q9Y6X0 1596 aa28.84■■■□□ 2.21
TNRC18-204ENST00000413081 NRXN3Q9Y4C0 1643 aa28.83■■■□□ 2.21
TNRC18-204ENST00000413081 ZNF326Q5BKZ1 582 aaKnown RBP28.82■■■□□ 2.2
TNRC18-204ENST00000413081 NHSL1Q5SYE7 1610 aa28.82■■■□□ 2.2
TNRC18-204ENST00000413081 SPHKAPQ2M3C7 1700 aa28.82■■■□□ 2.2
TNRC18-204ENST00000413081 SETD5Q9C0A6 1442 aa28.81■■■□□ 2.2
TNRC18-204ENST00000413081 CDK12Q9NYV4 1490 aaPredicted RBP28.8■■■□□ 2.2
TNRC18-204ENST00000413081 MST1RQ04912 1400 aa28.8■■■□□ 2.2
TNRC18-204ENST00000413081 AFF2P51816 1311 aa28.8■■■□□ 2.2
TNRC18-204ENST00000413081 ITGAEP38570 1179 aa28.8■■■□□ 2.2
TNRC18-204ENST00000413081 LRRC59Q96AG4 307 aaKnown RBP28.78■■■□□ 2.2
TNRC18-204ENST00000413081 METP08581 1390 aa28.75■■■□□ 2.19
TNRC18-204ENST00000413081 ADGRL3Q9HAR2 1447 aa28.74■■■□□ 2.19
TNRC18-204ENST00000413081 C8orf37Q96NL8 207 aa28.72■■■□□ 2.19
TNRC18-204ENST00000413081 NALCNQ8IZF0 1738 aa28.72■■■□□ 2.19
TNRC18-204ENST00000413081 PNPLA6Q8IY17 1366 aa28.69■■■□□ 2.18
TNRC18-204ENST00000413081 DDX17Q92841 729 aaKnown RBP28.68■■■□□ 2.18
TNRC18-204ENST00000413081 QTRT2Q9H974 415 aaKnown RBP28.67■■■□□ 2.18
TNRC18-204ENST00000413081 NEXMIFQ5QGS0 1516 aa28.67■■■□□ 2.18
TNRC18-204ENST00000413081 CLTCL1P53675 1640 aa28.66■■■□□ 2.18
TNRC18-204ENST00000413081 RBM6P78332 1123 aaKnown RBP28.66■■■□□ 2.18
TNRC18-204ENST00000413081 RGS12O14924 1447 aa28.66■■■□□ 2.18
TNRC18-204ENST00000413081 KIF1BO60333 1816 aa28.64■■■□□ 2.17
TNRC18-204ENST00000413081 C1orf167Q5SNV9 1468 aa28.61■■■□□ 2.17
TNRC18-204ENST00000413081 NGLY1Q96IV0 654 aa28.61■■■□□ 2.17
TNRC18-204ENST00000413081 ADAMTS2O95450 1211 aa28.6■■■□□ 2.17
TNRC18-204ENST00000413081 PTCH1Q13635 1447 aa28.57■■■□□ 2.16
TNRC18-204ENST00000413081 LAMC1P11047 1609 aa28.56■■■□□ 2.16
TNRC18-204ENST00000413081 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
TNRC18-204ENST00000413081 VGFO15240 615 aaPredicted RBP28.52■■■□□ 2.16
TNRC18-204ENST00000413081 ATAD2Q6PL18 1390 aa28.51■■■□□ 2.16
TNRC18-204ENST00000413081 SOS2Q07890 1332 aaPredicted RBP28.51■■■□□ 2.15
TNRC18-204ENST00000413081 ORAI2Q96SN7 254 aa28.51■■■□□ 2.15
TNRC18-204ENST00000413081 USP21Q9UK80 565 aa28.51■■■□□ 2.15
TNRC18-204ENST00000413081 ROBO2Q9HCK4 1378 aa28.5■■■□□ 2.15
TNRC18-204ENST00000413081 TRPC5Q9UL62 973 aaPredicted RBP28.48■■■□□ 2.15
TNRC18-204ENST00000413081 HFM1A2PYH4 1435 aa28.45■■■□□ 2.15
TNRC18-204ENST00000413081 PRAG1Q86YV5 1406 aa28.44■■■□□ 2.14
TNRC18-204ENST00000413081 COL22A1Q8NFW1 1626 aaPredicted RBP28.44■■■□□ 2.14
TNRC18-204ENST00000413081 NAIPQ13075 1403 aa28.43■■■□□ 2.14
TNRC18-204ENST00000413081 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
TNRC18-204ENST00000413081 FOXD1Q16676 465 aa28.41■■■□□ 2.14
TNRC18-204ENST00000413081 FNBP4Q8N3X1 1017 aaPredicted RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms