RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
COPS7B-209ENST00000412922 TMEM131LA2VDJ0 1609 aa18.77■□□□□ 0.6
COPS7B-209ENST00000412922 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
COPS7B-209ENST00000412922 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.59
COPS7B-209ENST00000412922 PLEKHG1Q9ULL1 1385 aa18.76■□□□□ 0.59
COPS7B-209ENST00000412922 ROCK1Q13464 1354 aa18.76■□□□□ 0.59
COPS7B-209ENST00000412922 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
COPS7B-209ENST00000412922 CHD2O14647 1828 aaKnown RBP18.75■□□□□ 0.59
COPS7B-209ENST00000412922 E9PCH4 1651 aa18.74■□□□□ 0.59
COPS7B-209ENST00000412922 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
COPS7B-209ENST00000412922 SLC26A8Q96RN1 970 aa18.74■□□□□ 0.59
COPS7B-209ENST00000412922 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
COPS7B-209ENST00000412922 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
COPS7B-209ENST00000412922 MSH6P52701 1360 aa18.74■□□□□ 0.59
COPS7B-209ENST00000412922 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
COPS7B-209ENST00000412922 PPP1R15AO75807 674 aaPredicted RBP18.72■□□□□ 0.59
COPS7B-209ENST00000412922 BCANQ96GW7 911 aa18.72■□□□□ 0.59
COPS7B-209ENST00000412922 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.7■□□□□ 0.58
COPS7B-209ENST00000412922 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
COPS7B-209ENST00000412922 PHLPP1O60346 1717 aa18.67■□□□□ 0.58
COPS7B-209ENST00000412922 PIK3R4Q99570 1358 aa18.66■□□□□ 0.58
COPS7B-209ENST00000412922 TRPM2O94759 1503 aa18.65■□□□□ 0.58
COPS7B-209ENST00000412922 TBX22Q9Y458 520 aa18.64■□□□□ 0.58
COPS7B-209ENST00000412922 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
COPS7B-209ENST00000412922 ADAMTS13Q76LX8 1427 aa18.63■□□□□ 0.57
COPS7B-209ENST00000412922 NUP155O75694 1391 aa18.62■□□□□ 0.57
COPS7B-209ENST00000412922 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
COPS7B-209ENST00000412922 RBM33Q96EV2 1170 aaKnown RBP18.61■□□□□ 0.57
COPS7B-209ENST00000412922 SLAIN2Q9P270 581 aa18.61■□□□□ 0.57
COPS7B-209ENST00000412922 COL16A1Q07092 1604 aaPredicted RBP18.6■□□□□ 0.57
COPS7B-209ENST00000412922 JCADQ9P266 1359 aa18.6■□□□□ 0.57
COPS7B-209ENST00000412922 RGS17Q9UGC6 210 aaPredicted RBP18.59■□□□□ 0.57
COPS7B-209ENST00000412922 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.59■□□□□ 0.57
COPS7B-209ENST00000412922 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
COPS7B-209ENST00000412922 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
COPS7B-209ENST00000412922 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
COPS7B-209ENST00000412922 DCCP43146 1447 aa18.56■□□□□ 0.56
COPS7B-209ENST00000412922 XRN1Q8IZH2 1706 aaKnown RBP18.56■□□□□ 0.56
COPS7B-209ENST00000412922 CADPS2Q86UW7 1296 aa18.56■□□□□ 0.56
COPS7B-209ENST00000412922 NRXN3Q9Y4C0 1643 aa18.55■□□□□ 0.56
COPS7B-209ENST00000412922 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
COPS7B-209ENST00000412922 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
COPS7B-209ENST00000412922 ATF3P18847 181 aa18.53■□□□□ 0.56
COPS7B-209ENST00000412922 ITGAEP38570 1179 aa18.52■□□□□ 0.56
COPS7B-209ENST00000412922 SPATA31A6Q5VVP1 1343 aa18.51■□□□□ 0.55
COPS7B-209ENST00000412922 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
COPS7B-209ENST00000412922 PTPRUQ92729 1446 aa18.5■□□□□ 0.55
COPS7B-209ENST00000412922 KIF1BO60333 1816 aa18.5■□□□□ 0.55
COPS7B-209ENST00000412922 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
COPS7B-209ENST00000412922 CLTCL1P53675 1640 aa18.49■□□□□ 0.55
COPS7B-209ENST00000412922 AMOTL2Q9Y2J4 779 aa18.49■□□□□ 0.55
COPS7B-209ENST00000412922 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
COPS7B-209ENST00000412922 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
COPS7B-209ENST00000412922 ASXL1Q8IXJ9 1541 aa18.46■□□□□ 0.55
COPS7B-209ENST00000412922 ZNF326Q5BKZ1 582 aaKnown RBP18.46■□□□□ 0.55
COPS7B-209ENST00000412922 LRP6O75581 1613 aa18.46■□□□□ 0.55
COPS7B-209ENST00000412922 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
COPS7B-209ENST00000412922 SETD1AO15047 1707 aaKnown RBP18.45■□□□□ 0.54
COPS7B-209ENST00000412922 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
COPS7B-209ENST00000412922 NAIPQ13075 1403 aa18.43■□□□□ 0.54
COPS7B-209ENST00000412922 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
COPS7B-209ENST00000412922 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
COPS7B-209ENST00000412922 MST1RQ04912 1400 aa18.42■□□□□ 0.54
COPS7B-209ENST00000412922 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
COPS7B-209ENST00000412922 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
COPS7B-209ENST00000412922 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
COPS7B-209ENST00000412922 METP08581 1390 aa18.4■□□□□ 0.54
COPS7B-209ENST00000412922 PTCH1Q13635 1447 aa18.39■□□□□ 0.54
COPS7B-209ENST00000412922 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
COPS7B-209ENST00000412922 HRCP23327 699 aa18.39■□□□□ 0.53
COPS7B-209ENST00000412922 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
COPS7B-209ENST00000412922 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
COPS7B-209ENST00000412922 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
COPS7B-209ENST00000412922 PPLO60437 1756 aa18.35■□□□□ 0.53
COPS7B-209ENST00000412922 LAMC1P11047 1609 aa18.35■□□□□ 0.53
COPS7B-209ENST00000412922 CDK12Q9NYV4 1490 aaPredicted RBP18.34■□□□□ 0.53
COPS7B-209ENST00000412922 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
COPS7B-209ENST00000412922 RPGRIP1LQ68CZ1 1315 aa18.33■□□□□ 0.52
COPS7B-209ENST00000412922 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
COPS7B-209ENST00000412922 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
COPS7B-209ENST00000412922 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
COPS7B-209ENST00000412922 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
COPS7B-209ENST00000412922 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
COPS7B-209ENST00000412922 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
COPS7B-209ENST00000412922 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
COPS7B-209ENST00000412922 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
COPS7B-209ENST00000412922 RXRBP28702 533 aa18.27■□□□□ 0.52
COPS7B-209ENST00000412922 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.52
COPS7B-209ENST00000412922 AFF2P51816 1311 aa18.27■□□□□ 0.51
COPS7B-209ENST00000412922 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
COPS7B-209ENST00000412922 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
COPS7B-209ENST00000412922 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
COPS7B-209ENST00000412922 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
COPS7B-209ENST00000412922 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
COPS7B-209ENST00000412922 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■□□□ 13.9
COPS7B-209ENST00000412922 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
COPS7B-209ENST00000412922 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
COPS7B-209ENST00000412922 TECPR2O15040 1411 aa18.21■□□□□ 0.5
COPS7B-209ENST00000412922 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
COPS7B-209ENST00000412922 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms