RNA–Protein interactions for RNA: ENST00000412670.1

PHTF1-206, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best)

Gene PHTF1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-206ENST00000412670 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
PHTF1-206ENST00000412670 NEURL4Q96JN8 1562 aa15.42■□□□□ 0.06
PHTF1-206ENST00000412670 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
PHTF1-206ENST00000412670 LTKP29376 864 aa15.41■□□□□ 0.06
PHTF1-206ENST00000412670 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
PHTF1-206ENST00000412670 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
PHTF1-206ENST00000412670 ZFYVE9O95405 1425 aa15.4■□□□□ 0.06
PHTF1-206ENST00000412670 RIMS2Q9UQ26 1411 aa15.39■□□□□ 0.05
PHTF1-206ENST00000412670 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
PHTF1-206ENST00000412670 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
PHTF1-206ENST00000412670 CLTCL1P53675 1640 aa15.37■□□□□ 0.05
PHTF1-206ENST00000412670 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
PHTF1-206ENST00000412670 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
PHTF1-206ENST00000412670 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
PHTF1-206ENST00000412670 KIF1BO60333 1816 aa15.35■□□□□ 0.05
PHTF1-206ENST00000412670 IQSEC2Q5JU85 1478 aa15.33■□□□□ 0.05
PHTF1-206ENST00000412670 VGFO15240 615 aaPredicted RBP15.33■□□□□ 0.04
PHTF1-206ENST00000412670 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
PHTF1-206ENST00000412670 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
PHTF1-206ENST00000412670 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.04
PHTF1-206ENST00000412670 CPS1P31327 1500 aa15.33■□□□□ 0.04
PHTF1-206ENST00000412670 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
PHTF1-206ENST00000412670 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
PHTF1-206ENST00000412670 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
PHTF1-206ENST00000412670 BCANQ96GW7 911 aa15.31■□□□□ 0.04
PHTF1-206ENST00000412670 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
PHTF1-206ENST00000412670 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
PHTF1-206ENST00000412670 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
PHTF1-206ENST00000412670 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
PHTF1-206ENST00000412670 KCNA6P17658 529 aa15.28■□□□□ 0.04
PHTF1-206ENST00000412670 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
PHTF1-206ENST00000412670 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.04
PHTF1-206ENST00000412670 SETBP1Q9Y6X0 1596 aa15.27■□□□□ 0.03
PHTF1-206ENST00000412670 ADAMTS13Q76LX8 1427 aa15.26■□□□□ 0.03
PHTF1-206ENST00000412670 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-206ENST00000412670 FBXO41Q8TF61 875 aa15.25■□□□□ 0.03
PHTF1-206ENST00000412670 RGL3Q3MIN7 710 aa15.24■□□□□ 0.03
PHTF1-206ENST00000412670 NKTRP30414 1462 aaKnown RBP15.23■□□□□ 0.03
PHTF1-206ENST00000412670 NWD1Q149M9 1564 aa15.22■□□□□ 0.03
PHTF1-206ENST00000412670 PPLO60437 1756 aa15.21■□□□□ 0.03
PHTF1-206ENST00000412670 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
PHTF1-206ENST00000412670 LRRC7Q96NW7 1537 aa15.2■□□□□ 0.02
PHTF1-206ENST00000412670 MYOM2P54296 1465 aa15.2■□□□□ 0.02
PHTF1-206ENST00000412670 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
PHTF1-206ENST00000412670 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
PHTF1-206ENST00000412670 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
PHTF1-206ENST00000412670 PROSER2Q86WR7 435 aaPredicted RBP15.18■□□□□ 0.02
PHTF1-206ENST00000412670 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
PHTF1-206ENST00000412670 IFT172Q9UG01 1749 aa15.17■□□□□ 0.02
PHTF1-206ENST00000412670 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
PHTF1-206ENST00000412670 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
PHTF1-206ENST00000412670 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
PHTF1-206ENST00000412670 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
PHTF1-206ENST00000412670 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
PHTF1-206ENST00000412670 TOM1O60784 492 aa15.16■□□□□ 0.02
PHTF1-206ENST00000412670 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
PHTF1-206ENST00000412670 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
PHTF1-206ENST00000412670 METP08581 1390 aa15.15■□□□□ 0.02
PHTF1-206ENST00000412670 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
PHTF1-206ENST00000412670 PRAG1Q86YV5 1406 aa15.15■□□□□ 0.02
PHTF1-206ENST00000412670 TMEM94Q12767 1356 aa15.14■□□□□ 0.01
PHTF1-206ENST00000412670 UBAP1LF5GYI3 381 aa15.13■□□□□ 0.01
PHTF1-206ENST00000412670 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
PHTF1-206ENST00000412670 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
PHTF1-206ENST00000412670 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
PHTF1-206ENST00000412670 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
PHTF1-206ENST00000412670 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
PHTF1-206ENST00000412670 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
PHTF1-206ENST00000412670 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
PHTF1-206ENST00000412670 LAMC1P11047 1609 aa15.11■□□□□ 0.01
PHTF1-206ENST00000412670 MSH6P52701 1360 aa15.11■□□□□ 0.01
PHTF1-206ENST00000412670 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
PHTF1-206ENST00000412670 C19orf44Q9H6X5 657 aa15.1■□□□□ 0.01
PHTF1-206ENST00000412670 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
PHTF1-206ENST00000412670 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
PHTF1-206ENST00000412670 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
PHTF1-206ENST00000412670 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
PHTF1-206ENST00000412670 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
PHTF1-206ENST00000412670 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
PHTF1-206ENST00000412670 TECPR2O15040 1411 aa15.08■□□□□ 0
PHTF1-206ENST00000412670 C14orf37Q86TY3 774 aa15.07■□□□□ 0
PHTF1-206ENST00000412670 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
PHTF1-206ENST00000412670 DCCP43146 1447 aa15.07■□□□□ 0
PHTF1-206ENST00000412670 CFAP70Q5T0N1 1121 aa15.06■□□□□ 0
PHTF1-206ENST00000412670 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
PHTF1-206ENST00000412670 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
PHTF1-206ENST00000412670 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
PHTF1-206ENST00000412670 ATF3P18847 181 aa15.04■□□□□ -0
PHTF1-206ENST00000412670 NEUROD1Q13562 356 aa15.04■□□□□ -0
PHTF1-206ENST00000412670 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
PHTF1-206ENST00000412670 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
PHTF1-206ENST00000412670 FAM135BQ49AJ0 1406 aa15.03■□□□□ -0
PHTF1-206ENST00000412670 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
PHTF1-206ENST00000412670 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
PHTF1-206ENST00000412670 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
PHTF1-206ENST00000412670 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
PHTF1-206ENST00000412670 ASXL1Q8IXJ9 1541 aa15.02□□□□□ -0.01
PHTF1-206ENST00000412670 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
PHTF1-206ENST00000412670 KNDC1Q76NI1 1749 aa15.01□□□□□ -0.01
PHTF1-206ENST00000412670 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms