RNA–Protein interactions for RNA: ENST00000412355.5

ATG9A-206, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-206ENST00000412355 SLC52A1Q9NWF4 448 aa28.36■■■□□ 2.13
ATG9A-206ENST00000412355 PROSER2Q86WR7 435 aaPredicted RBP28.35■■■□□ 2.13
ATG9A-206ENST00000412355 UNC13BO14795 1591 aa28.35■■■□□ 2.13
ATG9A-206ENST00000412355 TMEM131LA2VDJ0 1609 aa28.35■■■□□ 2.13
ATG9A-206ENST00000412355 ZFYVE9O95405 1425 aa28.34■■■□□ 2.13
ATG9A-206ENST00000412355 FAM135BQ49AJ0 1406 aa28.34■■■□□ 2.13
ATG9A-206ENST00000412355 BCANQ96GW7 911 aa28.33■■■□□ 2.13
ATG9A-206ENST00000412355 CHD2O14647 1828 aaKnown RBP28.33■■■□□ 2.13
ATG9A-206ENST00000412355 E9PCH4 1651 aa28.32■■■□□ 2.12
ATG9A-206ENST00000412355 RGS17Q9UGC6 210 aaPredicted RBP28.31■■■□□ 2.12
ATG9A-206ENST00000412355 NKTRP30414 1462 aaKnown RBP28.31■■■□□ 2.12
ATG9A-206ENST00000412355 RIMS2Q9UQ26 1411 aa28.29■■■□□ 2.12
ATG9A-206ENST00000412355 PLEKHG1Q9ULL1 1385 aa28.26■■■□□ 2.12
ATG9A-206ENST00000412355 IQGAP3Q86VI3 1631 aa28.24■■■□□ 2.11
ATG9A-206ENST00000412355 PPP1R15AO75807 674 aaPredicted RBP28.23■■■□□ 2.11
ATG9A-206ENST00000412355 CHGAP10645 457 aaKnown RBP28.23■■■□□ 2.11
ATG9A-206ENST00000412355 NUTM2DQ5VT03 806 aaPredicted RBP28.22■■■□□ 2.11
ATG9A-206ENST00000412355 PHLPP1O60346 1717 aa28.21■■■□□ 2.11
ATG9A-206ENST00000412355 MSH6P52701 1360 aa28.21■■■□□ 2.11
ATG9A-206ENST00000412355 ROCK1Q13464 1354 aa28.18■■■□□ 2.1
ATG9A-206ENST00000412355 ITGAEP38570 1179 aa28.16■■■□□ 2.1
ATG9A-206ENST00000412355 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
ATG9A-206ENST00000412355 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
ATG9A-206ENST00000412355 SLAIN2Q9P270 581 aa28.15■■■□□ 2.1
ATG9A-206ENST00000412355 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
ATG9A-206ENST00000412355 POTEAQ6S8J7 498 aa28.13■■■□□ 2.09
ATG9A-206ENST00000412355 TBX22Q9Y458 520 aa28.13■■■□□ 2.09
ATG9A-206ENST00000412355 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
ATG9A-206ENST00000412355 NUP155O75694 1391 aa28.11■■■□□ 2.09
ATG9A-206ENST00000412355 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
ATG9A-206ENST00000412355 DIP2AQ14689 1571 aa28.1■■■□□ 2.09
ATG9A-206ENST00000412355 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
ATG9A-206ENST00000412355 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
ATG9A-206ENST00000412355 C14orf37Q86TY3 774 aa28.06■■■□□ 2.08
ATG9A-206ENST00000412355 PTPRUQ92729 1446 aa28.05■■■□□ 2.08
ATG9A-206ENST00000412355 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
ATG9A-206ENST00000412355 TRPM2O94759 1503 aa28.04■■■□□ 2.08
ATG9A-206ENST00000412355 SETD1AO15047 1707 aaKnown RBP28.03■■■□□ 2.08
ATG9A-206ENST00000412355 NCOA3Q9Y6Q9 1424 aa28.02■■■□□ 2.08
ATG9A-206ENST00000412355 JCADQ9P266 1359 aa28.02■■■□□ 2.08
ATG9A-206ENST00000412355 PIK3R4Q99570 1358 aa28■■■□□ 2.07
ATG9A-206ENST00000412355 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
ATG9A-206ENST00000412355 LRP6O75581 1613 aa27.98■■■□□ 2.07
ATG9A-206ENST00000412355 XRN1Q8IZH2 1706 aaKnown RBP27.98■■■□□ 2.07
ATG9A-206ENST00000412355 AHDC1Q5TGY3 1603 aaPredicted RBP27.96■■■□□ 2.07
ATG9A-206ENST00000412355 C19orf44Q9H6X5 657 aa27.96■■■□□ 2.07
ATG9A-206ENST00000412355 SETBP1Q9Y6X0 1596 aa27.95■■■□□ 2.07
ATG9A-206ENST00000412355 ATF3P18847 181 aa27.95■■■□□ 2.06
ATG9A-206ENST00000412355 CLTCL1P53675 1640 aa27.95■■■□□ 2.06
ATG9A-206ENST00000412355 CADPS2Q86UW7 1296 aa27.94■■■□□ 2.06
ATG9A-206ENST00000412355 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
ATG9A-206ENST00000412355 ZNF326Q5BKZ1 582 aaKnown RBP27.91■■■□□ 2.06
ATG9A-206ENST00000412355 METP08581 1390 aa27.89■■■□□ 2.06
ATG9A-206ENST00000412355 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
ATG9A-206ENST00000412355 KIF1BO60333 1816 aa27.88■■■□□ 2.05
ATG9A-206ENST00000412355 BRINP3Q76B58 766 aa27.88■■■□□ 2.05
ATG9A-206ENST00000412355 SPATA31A6Q5VVP1 1343 aa27.86■■■□□ 2.05
ATG9A-206ENST00000412355 ASXL1Q8IXJ9 1541 aa27.85■■■□□ 2.05
ATG9A-206ENST00000412355 NALCNQ8IZF0 1738 aa27.84■■■□□ 2.05
ATG9A-206ENST00000412355 MEX3CQ5U5Q3 659 aaKnown RBP27.84■■■□□ 2.05
ATG9A-206ENST00000412355 DCCP43146 1447 aa27.84■■■□□ 2.05
ATG9A-206ENST00000412355 NHSL1Q5SYE7 1610 aa27.83■■■□□ 2.05
ATG9A-206ENST00000412355 MST1RQ04912 1400 aa27.83■■■□□ 2.05
ATG9A-206ENST00000412355 NAIPQ13075 1403 aa27.82■■■□□ 2.04
ATG9A-206ENST00000412355 RRBP1Q9P2E9 1410 aaKnown RBP27.81■■■□□ 2.04
ATG9A-206ENST00000412355 NUTM2BA6NNL0 878 aaPredicted RBP27.78■■■□□ 2.04
ATG9A-206ENST00000412355 NUTM2EB1AL46 878 aaPredicted RBP27.78■■■□□ 2.04
ATG9A-206ENST00000412355 NUTM2AQ8IVF1 878 aaPredicted RBP27.78■■■□□ 2.04
ATG9A-206ENST00000412355 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
ATG9A-206ENST00000412355 DDX17Q92841 729 aaKnown RBP27.76■■■□□ 2.03
ATG9A-206ENST00000412355 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
ATG9A-206ENST00000412355 ZNF772Q68DY9 489 aaPredicted RBP27.73■■■□□ 2.03
ATG9A-206ENST00000412355 SETD5Q9C0A6 1442 aa27.73■■■□□ 2.03
ATG9A-206ENST00000412355 PPLO60437 1756 aa27.69■■■□□ 2.02
ATG9A-206ENST00000412355 HFM1A2PYH4 1435 aa27.66■■■□□ 2.02
ATG9A-206ENST00000412355 AFF2P51816 1311 aa27.66■■■□□ 2.02
ATG9A-206ENST00000412355 ROBO2Q9HCK4 1378 aa27.65■■■□□ 2.02
ATG9A-206ENST00000412355 C1orf167Q5SNV9 1468 aa27.64■■■□□ 2.02
ATG9A-206ENST00000412355 PNPLA6Q8IY17 1366 aa27.64■■■□□ 2.02
ATG9A-206ENST00000412355 LRRC59Q96AG4 307 aaKnown RBP27.63■■■□□ 2.01
ATG9A-206ENST00000412355 PTCH1Q13635 1447 aa27.63■■■□□ 2.01
ATG9A-206ENST00000412355 RXRBP28702 533 aa27.62■■■□□ 2.01
ATG9A-206ENST00000412355 UPF1Q92900 1129 aaKnown RBP eCLIP27.62■■■□□ 2.01
ATG9A-206ENST00000412355 LAMC1P11047 1609 aa27.61■■■□□ 2.01
ATG9A-206ENST00000412355 VGFO15240 615 aaPredicted RBP27.61■■■□□ 2.01
ATG9A-206ENST00000412355 SLC4A1APQ9BWU0 796 aaKnown RBP27.61■■■□□ 2.01
ATG9A-206ENST00000412355 FOXD1Q16676 465 aa27.59■■■□□ 2.01
ATG9A-206ENST00000412355 ORAI2Q96SN7 254 aa27.59■■■□□ 2.01
ATG9A-206ENST00000412355 C8orf37Q96NL8 207 aa27.58■■■□□ 2.01
ATG9A-206ENST00000412355 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
ATG9A-206ENST00000412355 PRAG1Q86YV5 1406 aa27.55■■■□□ 2
ATG9A-206ENST00000412355 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
ATG9A-206ENST00000412355 ADAMTS2O95450 1211 aa27.53■■■□□ 2
ATG9A-206ENST00000412355 RGS12O14924 1447 aa27.51■■□□□ 1.99
ATG9A-206ENST00000412355 IFT172Q9UG01 1749 aa27.51■■□□□ 1.99
ATG9A-206ENST00000412355 SOS2Q07890 1332 aaPredicted RBP27.5■■□□□ 1.99
ATG9A-206ENST00000412355 QTRT2Q9H974 415 aaKnown RBP27.5■■□□□ 1.99
ATG9A-206ENST00000412355 ADGRF5Q8IZF2 1346 aa27.49■■□□□ 1.99
ATG9A-206ENST00000412355 CDC42BPGQ6DT37 1551 aa27.47■■□□□ 1.99
ATG9A-206ENST00000412355 NGLY1Q96IV0 654 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms