RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-208	ENST00000411917	PPL	O60437	1756 aa		29.01	■■■□□ 2.23
PTPA-208	ENST00000411917	DCAF11	Q8TEB1	546 aa		29	■■■□□ 2.23
PTPA-208	ENST00000411917	PRAG1	Q86YV5	1406 aa		29	■■■□□ 2.23
PTPA-208	ENST00000411917	TMEM2	Q9UHN6	1383 aa		29	■■■□□ 2.23
PTPA-208	ENST00000411917	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.99	■■■□□ 2.23
PTPA-208	ENST00000411917	CHGA	P10645	457 aa	Known RBP	28.98	■■■□□ 2.23
PTPA-208	ENST00000411917	HDGF	P51858	240 aa	Known RBP	28.98	■■■□□ 2.23
PTPA-208	ENST00000411917	VGF	O15240	615 aa	Predicted RBP	28.97	■■■□□ 2.23
PTPA-208	ENST00000411917	ZNF326	Q5BKZ1	582 aa	Known RBP	28.97	■■■□□ 2.23
PTPA-208	ENST00000411917	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
PTPA-208	ENST00000411917	RIMS2	Q9UQ26	1411 aa		28.94	■■■□□ 2.22
PTPA-208	ENST00000411917	MYO5B	Q9ULV0	1848 aa		28.94	■■■□□ 2.22
PTPA-208	ENST00000411917	PIK3C2G	O75747	1445 aa		28.92	■■■□□ 2.22
PTPA-208	ENST00000411917	RALGAPB	Q86X10	1494 aa		28.91	■■■□□ 2.22
PTPA-208	ENST00000411917	KIAA1210	Q9ULL0	1709 aa		28.89	■■■□□ 2.22
PTPA-208	ENST00000411917	NBPF8	Q3BBV2	869 aa		28.87	■■■□□ 2.21
PTPA-208	ENST00000411917	PLPPR3	Q6T4P5	718 aa		28.87	■■■□□ 2.21
PTPA-208	ENST00000411917	GPRASP1	Q5JY77	1395 aa		28.87	■■■□□ 2.21
PTPA-208	ENST00000411917	KDM2A	Q9Y2K7	1162 aa		28.85	■■■□□ 2.21
PTPA-208	ENST00000411917	ADGRF5	Q8IZF2	1346 aa		28.85	■■■□□ 2.21
PTPA-208	ENST00000411917	LAMC1	P11047	1609 aa		28.84	■■■□□ 2.21
PTPA-208	ENST00000411917	SETBP1	Q9Y6X0	1596 aa		28.84	■■■□□ 2.21
PTPA-208	ENST00000411917	TRPM1	Q7Z4N2	1603 aa		28.83	■■■□□ 2.21
PTPA-208	ENST00000411917	PLEKHG1	Q9ULL1	1385 aa		28.83	■■■□□ 2.21
PTPA-208	ENST00000411917	EID1	Q9Y6B2	187 aa		28.82	■■■□□ 2.2
PTPA-208	ENST00000411917	SCAF11	Q99590	1463 aa	Known RBP	28.81	■■■□□ 2.2
PTPA-208	ENST00000411917	C14orf93	Q9H972	538 aa	Known RBP	28.8	■■■□□ 2.2
PTPA-208	ENST00000411917	LMTK3	Q96Q04	1460 aa		28.78	■■■□□ 2.2
PTPA-208	ENST00000411917	MED14	O60244	1454 aa		28.77	■■■□□ 2.2
PTPA-208	ENST00000411917	LTK	P29376	864 aa		28.75	■■■□□ 2.19
PTPA-208	ENST00000411917	TXNDC2	Q86VQ3	553 aa		28.75	■■■□□ 2.19
PTPA-208	ENST00000411917	ANKLE2	Q86XL3	938 aa		28.75	■■■□□ 2.19
PTPA-208	ENST00000411917	DIP2A	Q14689	1571 aa		28.74	■■■□□ 2.19
PTPA-208	ENST00000411917	ROCK2	O75116	1388 aa	Known RBP	28.74	■■■□□ 2.19
PTPA-208	ENST00000411917	NRXN3	Q9Y4C0	1643 aa		28.72	■■■□□ 2.19
PTPA-208	ENST00000411917	ADGRB1	O14514	1584 aa		28.71	■■■□□ 2.19
PTPA-208	ENST00000411917	ALK	Q9UM73	1620 aa		28.71	■■■□□ 2.19
PTPA-208	ENST00000411917	ADAMTS13	Q76LX8	1427 aa		28.69	■■■□□ 2.18
PTPA-208	ENST00000411917	SETD1A	O15047	1707 aa	Known RBP	28.67	■■■□□ 2.18
PTPA-208	ENST00000411917	CFAP70	Q5T0N1	1121 aa		28.67	■■■□□ 2.18
PTPA-208	ENST00000411917	POLR1A	O95602	1720 aa	Predicted RBP	28.66	■■■□□ 2.18
PTPA-208	ENST00000411917	PIK3R4	Q99570	1358 aa		28.65	■■■□□ 2.18
PTPA-208	ENST00000411917	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.65	■■■□□ 2.18
PTPA-208	ENST00000411917	TBX22	Q9Y458	520 aa		28.65	■■■□□ 2.18
PTPA-208	ENST00000411917	NBPF1	Q3BBV0	1214 aa		28.64	■■■□□ 2.18
PTPA-208	ENST00000411917	CARD11	Q9BXL7	1154 aa		28.64	■■■□□ 2.18
PTPA-208	ENST00000411917	IQGAP1	P46940	1657 aa		28.63	■■■□□ 2.17
PTPA-208	ENST00000411917	ASXL1	Q8IXJ9	1541 aa		28.62	■■■□□ 2.17
PTPA-208	ENST00000411917	NPHP4	O75161	1426 aa	Predicted RBP	28.61	■■■□□ 2.17
PTPA-208	ENST00000411917	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.59	■■■□□ 2.17
PTPA-208	ENST00000411917	USP47	Q96K76	1375 aa		28.59	■■■□□ 2.17
PTPA-208	ENST00000411917	EIF3A	Q14152	1382 aa	Known RBP	28.58	■■■□□ 2.17
PTPA-208	ENST00000411917	LRPPRC	P42704	1394 aa	Known RBP	28.57	■■■□□ 2.16
PTPA-208	ENST00000411917	TECPR2	O15040	1411 aa		28.57	■■■□□ 2.16
PTPA-208	ENST00000411917	ABCC11	Q96J66	1382 aa		28.56	■■■□□ 2.16
PTPA-208	ENST00000411917	DLC1	Q96QB1	1528 aa		28.56	■■■□□ 2.16
PTPA-208	ENST00000411917	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.55	■■■□□ 2.16
PTPA-208	ENST00000411917	SIRT1	Q96EB6	747 aa		28.54	■■■□□ 2.16
PTPA-208	ENST00000411917	MET	P08581	1390 aa		28.53	■■■□□ 2.16
PTPA-208	ENST00000411917	SLC24A1	O60721	1099 aa		28.52	■■■□□ 2.16
PTPA-208	ENST00000411917	KNDC1	Q76NI1	1749 aa		28.51	■■■□□ 2.15
PTPA-208	ENST00000411917	SBNO2	Q9Y2G9	1366 aa		28.5	■■■□□ 2.15
PTPA-208	ENST00000411917	NCKAP5L	Q9HCH0	1330 aa		28.5	■■■□□ 2.15
PTPA-208	ENST00000411917	HSPA2	P54652	639 aa		28.48	■■■□□ 2.15
PTPA-208	ENST00000411917	BCAN	Q96GW7	911 aa		28.48	■■■□□ 2.15
PTPA-208	ENST00000411917	FAM135B	Q49AJ0	1406 aa		28.48	■■■□□ 2.15
PTPA-208	ENST00000411917	CPS1	P31327	1500 aa		28.48	■■■□□ 2.15
PTPA-208	ENST00000411917	STRC	Q7RTU9	1775 aa		28.47	■■■□□ 2.15
PTPA-208	ENST00000411917	PTCH1	Q13635	1447 aa		28.47	■■■□□ 2.15
PTPA-208	ENST00000411917	HSPA5	P11021	654 aa	Known RBP	28.47	■■■□□ 2.15
PTPA-208	ENST00000411917	TMEM132E	Q6IEE7	984 aa		28.47	■■■□□ 2.15
PTPA-208	ENST00000411917	SLC26A8	Q96RN1	970 aa		28.45	■■■□□ 2.14
PTPA-208	ENST00000411917	DMRT2	Q9Y5R5	561 aa		28.44	■■■□□ 2.14
PTPA-208	ENST00000411917	XRN1	Q8IZH2	1706 aa	Known RBP	28.43	■■■□□ 2.14
PTPA-208	ENST00000411917	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.43	■■■□□ 2.14
PTPA-208	ENST00000411917	NWD1	Q149M9	1564 aa		28.43	■■■□□ 2.14
PTPA-208	ENST00000411917	PTPRU	Q92729	1446 aa		28.42	■■■□□ 2.14
PTPA-208	ENST00000411917	ST20-MTHFS	A0A0A6YYL1	179 aa		28.4	■■■□□ 2.14
PTPA-208	ENST00000411917	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.4	■■■□□ 2.14
PTPA-208	ENST00000411917	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.39	■■■□□ 2.14
PTPA-208	ENST00000411917	TESK2	Q96S53	571 aa		28.38	■■■□□ 2.13
PTPA-208	ENST00000411917	TRAK1	Q9UPV9	953 aa		28.38	■■■□□ 2.13
PTPA-208	ENST00000411917	CHD2	O14647	1828 aa	Known RBP	28.38	■■■□□ 2.13
PTPA-208	ENST00000411917	KCNA6	P17658	529 aa		28.36	■■■□□ 2.13
PTPA-208	ENST00000411917	NKTR	P30414	1462 aa	Known RBP	28.35	■■■□□ 2.13
PTPA-208	ENST00000411917	AMOTL2	Q9Y2J4	779 aa		28.35	■■■□□ 2.13
PTPA-208	ENST00000411917	PUS7	Q96PZ0	661 aa	Known RBP	28.32	■■■□□ 2.12
PTPA-208	ENST00000411917	STK26	Q9P289	416 aa		28.31	■■■□□ 2.12
PTPA-208	ENST00000411917	ROBO2	Q9HCK4	1378 aa		28.31	■■■□□ 2.12
PTPA-208	ENST00000411917	QRICH2	Q9H0J4	1663 aa		28.29	■■■□□ 2.12
PTPA-208	ENST00000411917	NCOA3	Q9Y6Q9	1424 aa		28.29	■■■□□ 2.12
PTPA-208	ENST00000411917	PRAM1	Q96QH2	718 aa		28.29	■■■□□ 2.12
PTPA-208	ENST00000411917	TMF1	P82094	1093 aa		28.28	■■■□□ 2.12
PTPA-208	ENST00000411917	CDCA8	Q53HL2	280 aa		28.28	■■■□□ 2.12
PTPA-208	ENST00000411917	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.28	■■■□□ 2.12
PTPA-208	ENST00000411917	SENP3	Q9H4L4	574 aa	Predicted RBP	28.28	■■■□□ 2.12
PTPA-208	ENST00000411917	POGK	Q9P215	609 aa		28.27	■■■□□ 2.12
PTPA-208	ENST00000411917	ADGRB2	O60241	1585 aa		28.27	■■■□□ 2.12
PTPA-208	ENST00000411917	CCDC7	Q96M83	1385 aa		28.22	■■■□□ 2.11
PTPA-208	ENST00000411917	PLEKHH1	Q9ULM0	1364 aa		28.22	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms