RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
CLHC1-205ENST00000411884 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
CLHC1-205ENST00000411884 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
CLHC1-205ENST00000411884 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
CLHC1-205ENST00000411884 FAM117AQ9C073 453 aa8.82□□□□□ -1
CLHC1-205ENST00000411884 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
CLHC1-205ENST00000411884 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
CLHC1-205ENST00000411884 SAMD7Q7Z3H4 446 aa8.79□□□□□ -1
CLHC1-205ENST00000411884 IL27Q8NEV9 243 aa8.79□□□□□ -1
CLHC1-205ENST00000411884 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
CLHC1-205ENST00000411884 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
CLHC1-205ENST00000411884 DDX11L8A8MPP1 907 aa8.77□□□□□ -1.01
CLHC1-205ENST00000411884 CD46P15529 392 aa8.77□□□□□ -1.01
CLHC1-205ENST00000411884 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
CLHC1-205ENST00000411884 SLC10A3P09131 477 aa8.76□□□□□ -1.01
CLHC1-205ENST00000411884 SULF1Q8IWU6 871 aa8.76□□□□□ -1.01
CLHC1-205ENST00000411884 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
CLHC1-205ENST00000411884 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
CLHC1-205ENST00000411884 HDGFP51858 240 aaKnown RBP8.75□□□□□ -1.01
CLHC1-205ENST00000411884 GOLGA8CPA6NN73 597 aa8.73□□□□□ -1.01
CLHC1-205ENST00000411884 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
CLHC1-205ENST00000411884 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
CLHC1-205ENST00000411884 LRCH3Q96II8 777 aa8.73□□□□□ -1.01
CLHC1-205ENST00000411884 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
CLHC1-205ENST00000411884 SOWAHBA6NEL2 793 aa8.72□□□□□ -1.01
CLHC1-205ENST00000411884 RDH13Q8NBN7 331 aa8.72□□□□□ -1.01
CLHC1-205ENST00000411884 WNT2BQ93097 391 aa8.72□□□□□ -1.01
CLHC1-205ENST00000411884 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
CLHC1-205ENST00000411884 BCAMP50895 628 aa8.71□□□□□ -1.02
CLHC1-205ENST00000411884 GCGRP47871 477 aa8.7□□□□□ -1.02
CLHC1-205ENST00000411884 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
CLHC1-205ENST00000411884 RNF40O75150 1001 aa8.69□□□□□ -1.02
CLHC1-205ENST00000411884 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
CLHC1-205ENST00000411884 SPIRE2Q8WWL2 714 aa8.69□□□□□ -1.02
CLHC1-205ENST00000411884 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
CLHC1-205ENST00000411884 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
CLHC1-205ENST00000411884 CFHP08603 1231 aa8.67□□□□□ -1.02
CLHC1-205ENST00000411884 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
CLHC1-205ENST00000411884 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
CLHC1-205ENST00000411884 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
CLHC1-205ENST00000411884 KCTD12Q96CX2 325 aaKnown RBP8.67□□□□□ -1.02
CLHC1-205ENST00000411884 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
CLHC1-205ENST00000411884 KDM4AO75164 1064 aa8.66□□□□□ -1.02
CLHC1-205ENST00000411884 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
CLHC1-205ENST00000411884 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
CLHC1-205ENST00000411884 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
CLHC1-205ENST00000411884 PPP4CP60510 307 aa8.65□□□□□ -1.02
CLHC1-205ENST00000411884 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
CLHC1-205ENST00000411884 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
CLHC1-205ENST00000411884 NECTIN2Q92692 538 aa8.64□□□□□ -1.03
CLHC1-205ENST00000411884 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
CLHC1-205ENST00000411884 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CLHC1-205ENST00000411884 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
CLHC1-205ENST00000411884 APLP1P51693 650 aa8.63□□□□□ -1.03
CLHC1-205ENST00000411884 USP46P62068 366 aa8.63□□□□□ -1.03
CLHC1-205ENST00000411884 SPNS2Q8IVW8 549 aa8.63□□□□□ -1.03
CLHC1-205ENST00000411884 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
CLHC1-205ENST00000411884 HOXA2O43364 376 aa8.62□□□□□ -1.03
CLHC1-205ENST00000411884 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
CLHC1-205ENST00000411884 FUT2Q10981 343 aa8.62□□□□□ -1.03
CLHC1-205ENST00000411884 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
CLHC1-205ENST00000411884 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
CLHC1-205ENST00000411884 SPTLC1O15269 473 aa8.61□□□□□ -1.03
CLHC1-205ENST00000411884 NDUFV2P19404 249 aa8.61□□□□□ -1.03
CLHC1-205ENST00000411884 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
CLHC1-205ENST00000411884 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
CLHC1-205ENST00000411884 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
CLHC1-205ENST00000411884 HLA-CQ95604 372 aa8.61□□□□□ -1.03
CLHC1-205ENST00000411884 GJA5P36382 358 aa8.6□□□□□ -1.03
CLHC1-205ENST00000411884 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
CLHC1-205ENST00000411884 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
CLHC1-205ENST00000411884 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
CLHC1-205ENST00000411884 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
CLHC1-205ENST00000411884 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLHC1-205ENST00000411884 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
CLHC1-205ENST00000411884 PTPN5P54829 565 aa8.58□□□□□ -1.04
CLHC1-205ENST00000411884 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
CLHC1-205ENST00000411884 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
CLHC1-205ENST00000411884 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
CLHC1-205ENST00000411884 FDX1P10109 184 aa8.57□□□□□ -1.04
CLHC1-205ENST00000411884 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
CLHC1-205ENST00000411884 MORN1Q5T089 497 aa8.57□□□□□ -1.04
CLHC1-205ENST00000411884 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
CLHC1-205ENST00000411884 FBXO31Q5XUX0 539 aaPredicted RBP8.56□□□□□ -1.04
CLHC1-205ENST00000411884 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
CLHC1-205ENST00000411884 GTF3C3Q9Y5Q9 886 aa8.56□□□□□ -1.04
CLHC1-205ENST00000411884 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
CLHC1-205ENST00000411884 QPCTQ16769 361 aa8.54□□□□□ -1.04
CLHC1-205ENST00000411884 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
CLHC1-205ENST00000411884 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
CLHC1-205ENST00000411884 SLC27A5Q9Y2P5 690 aa8.54□□□□□ -1.04
CLHC1-205ENST00000411884 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
CLHC1-205ENST00000411884 LILRB3O75022 631 aa8.53□□□□□ -1.04
CLHC1-205ENST00000411884 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
CLHC1-205ENST00000411884 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
CLHC1-205ENST00000411884 SCUBE3Q8IX30 993 aa8.52□□□□□ -1.05
CLHC1-205ENST00000411884 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
CLHC1-205ENST00000411884 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
CLHC1-205ENST00000411884 HRCP23327 699 aa8.51□□□□□ -1.05
CLHC1-205ENST00000411884 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms