RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 CFAP65Q6ZU64 1925 aaKnown RBP14.09□□□□□ -0.15
MRPL48-204ENST00000411840 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.15
MRPL48-204ENST00000411840 KDM5AP29375 1690 aaKnown RBP14.07□□□□□ -0.16
MRPL48-204ENST00000411840 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
MRPL48-204ENST00000411840 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
MRPL48-204ENST00000411840 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
MRPL48-204ENST00000411840 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
MRPL48-204ENST00000411840 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
MRPL48-204ENST00000411840 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
MRPL48-204ENST00000411840 CHGAP10645 457 aaKnown RBP14.03□□□□□ -0.16
MRPL48-204ENST00000411840 ZFYVE9O95405 1425 aa14.03□□□□□ -0.16
MRPL48-204ENST00000411840 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
MRPL48-204ENST00000411840 RIMS2Q9UQ26 1411 aa14.02□□□□□ -0.16
MRPL48-204ENST00000411840 MSH6P52701 1360 aa14.02□□□□□ -0.17
MRPL48-204ENST00000411840 PLEKHG1Q9ULL1 1385 aa14.02□□□□□ -0.17
MRPL48-204ENST00000411840 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
MRPL48-204ENST00000411840 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
MRPL48-204ENST00000411840 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
MRPL48-204ENST00000411840 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
MRPL48-204ENST00000411840 NUTM2DQ5VT03 806 aaPredicted RBP13.99□□□□□ -0.17
MRPL48-204ENST00000411840 ROCK1Q13464 1354 aa13.98□□□□□ -0.17
MRPL48-204ENST00000411840 NWD1Q149M9 1564 aa13.98□□□□□ -0.17
MRPL48-204ENST00000411840 ITGAEP38570 1179 aa13.97□□□□□ -0.17
MRPL48-204ENST00000411840 POTEAQ6S8J7 498 aa13.97□□□□□ -0.17
MRPL48-204ENST00000411840 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
MRPL48-204ENST00000411840 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
MRPL48-204ENST00000411840 NUP155O75694 1391 aa13.96□□□□□ -0.17
MRPL48-204ENST00000411840 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
MRPL48-204ENST00000411840 NCOA3Q9Y6Q9 1424 aa13.95□□□□□ -0.18
MRPL48-204ENST00000411840 UNC13BO14795 1591 aa13.95□□□□□ -0.18
MRPL48-204ENST00000411840 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
MRPL48-204ENST00000411840 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
MRPL48-204ENST00000411840 CADPS2Q86UW7 1296 aa13.93□□□□□ -0.18
MRPL48-204ENST00000411840 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
MRPL48-204ENST00000411840 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
MRPL48-204ENST00000411840 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
MRPL48-204ENST00000411840 JCADQ9P266 1359 aa13.93□□□□□ -0.18
MRPL48-204ENST00000411840 GCC2Q8IWJ2 1684 aa13.92□□□□□ -0.18
MRPL48-204ENST00000411840 ATF3P18847 181 aa13.92□□□□□ -0.18
MRPL48-204ENST00000411840 E9PCH4 1651 aa13.91□□□□□ -0.18
MRPL48-204ENST00000411840 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
MRPL48-204ENST00000411840 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.19
MRPL48-204ENST00000411840 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
MRPL48-204ENST00000411840 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
MRPL48-204ENST00000411840 DIP2AQ14689 1571 aa13.88□□□□□ -0.19
MRPL48-204ENST00000411840 MYO5BQ9ULV0 1848 aa13.87□□□□□ -0.19
MRPL48-204ENST00000411840 SPATA31A6Q5VVP1 1343 aa13.87□□□□□ -0.19
MRPL48-204ENST00000411840 PHLPP1O60346 1717 aa13.87□□□□□ -0.19
MRPL48-204ENST00000411840 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
MRPL48-204ENST00000411840 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
MRPL48-204ENST00000411840 TRPM2O94759 1503 aa13.85□□□□□ -0.19
MRPL48-204ENST00000411840 MEX3CQ5U5Q3 659 aaKnown RBP13.85□□□□□ -0.19
MRPL48-204ENST00000411840 COL16A1Q07092 1604 aaPredicted RBP13.85□□□□□ -0.19
MRPL48-204ENST00000411840 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
MRPL48-204ENST00000411840 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
MRPL48-204ENST00000411840 METP08581 1390 aa13.83□□□□□ -0.2
MRPL48-204ENST00000411840 LRP6O75581 1613 aa13.82□□□□□ -0.2
MRPL48-204ENST00000411840 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
MRPL48-204ENST00000411840 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-204ENST00000411840 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-204ENST00000411840 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-204ENST00000411840 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-204ENST00000411840 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
MRPL48-204ENST00000411840 DCCP43146 1447 aa13.81□□□□□ -0.2
MRPL48-204ENST00000411840 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
MRPL48-204ENST00000411840 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
MRPL48-204ENST00000411840 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
MRPL48-204ENST00000411840 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
MRPL48-204ENST00000411840 MST1RQ04912 1400 aa13.78□□□□□ -0.2
MRPL48-204ENST00000411840 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
MRPL48-204ENST00000411840 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
MRPL48-204ENST00000411840 RXRBP28702 533 aa13.77□□□□□ -0.21
MRPL48-204ENST00000411840 NAIPQ13075 1403 aa13.77□□□□□ -0.21
MRPL48-204ENST00000411840 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
MRPL48-204ENST00000411840 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
MRPL48-204ENST00000411840 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
MRPL48-204ENST00000411840 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
MRPL48-204ENST00000411840 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
MRPL48-204ENST00000411840 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
MRPL48-204ENST00000411840 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
MRPL48-204ENST00000411840 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
MRPL48-204ENST00000411840 ADGRL3Q9HAR2 1447 aa13.74□□□□□ -0.21
MRPL48-204ENST00000411840 AFF2P51816 1311 aa13.74□□□□□ -0.21
MRPL48-204ENST00000411840 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPL48-204ENST00000411840 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
MRPL48-204ENST00000411840 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
MRPL48-204ENST00000411840 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
MRPL48-204ENST00000411840 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.21
MRPL48-204ENST00000411840 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
MRPL48-204ENST00000411840 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.22
MRPL48-204ENST00000411840 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.22
MRPL48-204ENST00000411840 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
MRPL48-204ENST00000411840 QTRT2Q9H974 415 aaKnown RBP13.7□□□□□ -0.22
MRPL48-204ENST00000411840 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
MRPL48-204ENST00000411840 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
MRPL48-204ENST00000411840 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
MRPL48-204ENST00000411840 ADAMTS2O95450 1211 aa13.68□□□□□ -0.22
MRPL48-204ENST00000411840 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
MRPL48-204ENST00000411840 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
MRPL48-204ENST00000411840 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms