RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ZFYVE9O95405 1425 aa26.78■■□□□ 1.88
CDC42-204ENST00000411827 TMEM2Q9UHN6 1383 aa26.77■■□□□ 1.88
CDC42-204ENST00000411827 ILDR1Q86SU0 546 aaPredicted RBP26.76■■□□□ 1.87
CDC42-204ENST00000411827 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
CDC42-204ENST00000411827 EID1Q9Y6B2 187 aa26.75■■□□□ 1.87
CDC42-204ENST00000411827 SLIT1O75093 1534 aa26.74■■□□□ 1.87
CDC42-204ENST00000411827 MYOM2P54296 1465 aa26.74■■□□□ 1.87
CDC42-204ENST00000411827 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
CDC42-204ENST00000411827 LMTK3Q96Q04 1460 aa26.73■■□□□ 1.87
CDC42-204ENST00000411827 ARHGAP23Q9P227 1491 aa26.72■■□□□ 1.87
CDC42-204ENST00000411827 RIMS2Q9UQ26 1411 aa26.72■■□□□ 1.87
CDC42-204ENST00000411827 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.87
CDC42-204ENST00000411827 PPLO60437 1756 aa26.67■■□□□ 1.86
CDC42-204ENST00000411827 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
CDC42-204ENST00000411827 KDM2AQ9Y2K7 1162 aa26.67■■□□□ 1.86
CDC42-204ENST00000411827 IFT172Q9UG01 1749 aa26.67■■□□□ 1.86
CDC42-204ENST00000411827 MYO5BQ9ULV0 1848 aa26.67■■□□□ 1.86
CDC42-204ENST00000411827 TXNDC2Q86VQ3 553 aa26.65■■□□□ 1.86
CDC42-204ENST00000411827 NRXN1Q9ULB1 1477 aa26.65■■□□□ 1.86
CDC42-204ENST00000411827 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
CDC42-204ENST00000411827 SCAF11Q99590 1463 aaKnown RBP26.62■■□□□ 1.85
CDC42-204ENST00000411827 PLEKHG1Q9ULL1 1385 aa26.6■■□□□ 1.85
CDC42-204ENST00000411827 HSPA2P54652 639 aa26.6■■□□□ 1.85
CDC42-204ENST00000411827 PIK3C2GO75747 1445 aa26.59■■□□□ 1.85
CDC42-204ENST00000411827 ADGRF5Q8IZF2 1346 aa26.59■■□□□ 1.85
CDC42-204ENST00000411827 LTKP29376 864 aa26.57■■□□□ 1.84
CDC42-204ENST00000411827 C14orf93Q9H972 538 aaKnown RBP26.55■■□□□ 1.84
CDC42-204ENST00000411827 KIAA1210Q9ULL0 1709 aa26.54■■□□□ 1.84
CDC42-204ENST00000411827 MED14O60244 1454 aa26.54■■□□□ 1.84
CDC42-204ENST00000411827 SETBP1Q9Y6X0 1596 aa26.54■■□□□ 1.84
CDC42-204ENST00000411827 LAMC1P11047 1609 aa26.54■■□□□ 1.84
CDC42-204ENST00000411827 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
CDC42-204ENST00000411827 RALGAPBQ86X10 1494 aa26.51■■□□□ 1.83
CDC42-204ENST00000411827 NUTM2DQ5VT03 806 aaPredicted RBP26.51■■□□□ 1.83
CDC42-204ENST00000411827 TBX22Q9Y458 520 aa26.5■■□□□ 1.83
CDC42-204ENST00000411827 BCANQ96GW7 911 aa26.49■■□□□ 1.83
CDC42-204ENST00000411827 DIP2AQ14689 1571 aa26.48■■□□□ 1.83
CDC42-204ENST00000411827 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
CDC42-204ENST00000411827 GPRASP1Q5JY77 1395 aa26.47■■□□□ 1.83
CDC42-204ENST00000411827 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
CDC42-204ENST00000411827 POLR1AO95602 1720 aaPredicted RBP26.47■■□□□ 1.83
CDC42-204ENST00000411827 ROCK2O75116 1388 aaKnown RBP26.46■■□□□ 1.83
CDC42-204ENST00000411827 TRPM1Q7Z4N2 1603 aa26.46■■□□□ 1.83
CDC42-204ENST00000411827 CFAP70Q5T0N1 1121 aa26.45■■□□□ 1.82
CDC42-204ENST00000411827 ALKQ9UM73 1620 aa26.45■■□□□ 1.82
CDC42-204ENST00000411827 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
CDC42-204ENST00000411827 NCKAP5LQ9HCH0 1330 aa26.42■■□□□ 1.82
CDC42-204ENST00000411827 ADAMTS13Q76LX8 1427 aa26.42■■□□□ 1.82
CDC42-204ENST00000411827 CARD11Q9BXL7 1154 aa26.4■■□□□ 1.82
CDC42-204ENST00000411827 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
CDC42-204ENST00000411827 IQGAP1P46940 1657 aa26.39■■□□□ 1.82
CDC42-204ENST00000411827 NBPF1Q3BBV0 1214 aa26.38■■□□□ 1.81
CDC42-204ENST00000411827 ADGRB1O14514 1584 aa26.36■■□□□ 1.81
CDC42-204ENST00000411827 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
CDC42-204ENST00000411827 EIF3AQ14152 1382 aaKnown RBP26.34■■□□□ 1.81
CDC42-204ENST00000411827 SLC24A1O60721 1099 aa26.34■■□□□ 1.81
CDC42-204ENST00000411827 FBXO41Q8TF61 875 aa26.34■■□□□ 1.81
CDC42-204ENST00000411827 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.81
CDC42-204ENST00000411827 ABCC11Q96J66 1382 aa26.33■■□□□ 1.81
CDC42-204ENST00000411827 EIF4G2P78344 907 aaKnown RBP eCLIP26.33■■□□□ 1.81
CDC42-204ENST00000411827 SIRT1Q96EB6 747 aa26.33■■□□□ 1.81
CDC42-204ENST00000411827 SETD1AO15047 1707 aaKnown RBP26.32■■□□□ 1.8
CDC42-204ENST00000411827 STRCQ7RTU9 1775 aa26.32■■□□□ 1.8
CDC42-204ENST00000411827 METP08581 1390 aa26.32■■□□□ 1.8
CDC42-204ENST00000411827 YTHDC2Q9H6S0 1430 aaKnown RBP26.31■■□□□ 1.8
CDC42-204ENST00000411827 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
CDC42-204ENST00000411827 TECPR2O15040 1411 aa26.29■■□□□ 1.8
CDC42-204ENST00000411827 USP47Q96K76 1375 aa26.27■■□□□ 1.8
CDC42-204ENST00000411827 ASXL1Q8IXJ9 1541 aa26.27■■□□□ 1.8
CDC42-204ENST00000411827 DLC1Q96QB1 1528 aa26.27■■□□□ 1.8
CDC42-204ENST00000411827 KCNA6P17658 529 aa26.26■■□□□ 1.79
CDC42-204ENST00000411827 FAM135BQ49AJ0 1406 aa26.25■■□□□ 1.79
CDC42-204ENST00000411827 SENP3Q9H4L4 574 aaPredicted RBP26.25■■□□□ 1.79
CDC42-204ENST00000411827 AMOTL2Q9Y2J4 779 aa26.24■■□□□ 1.79
CDC42-204ENST00000411827 TRAK1Q9UPV9 953 aa26.23■■□□□ 1.79
CDC42-204ENST00000411827 STK26Q9P289 416 aa26.22■■□□□ 1.79
CDC42-204ENST00000411827 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
CDC42-204ENST00000411827 KNDC1Q76NI1 1749 aa26.21■■□□□ 1.79
CDC42-204ENST00000411827 CPS1P31327 1500 aa26.19■■□□□ 1.78
CDC42-204ENST00000411827 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CDC42-204ENST00000411827 SBNO2Q9Y2G9 1366 aa26.19■■□□□ 1.78
CDC42-204ENST00000411827 CHD2O14647 1828 aaKnown RBP26.18■■□□□ 1.78
CDC42-204ENST00000411827 NWD1Q149M9 1564 aa26.18■■□□□ 1.78
CDC42-204ENST00000411827 CERKQ8TCT0 537 aa26.18■■□□□ 1.78
CDC42-204ENST00000411827 PTPRUQ92729 1446 aa26.18■■□□□ 1.78
CDC42-204ENST00000411827 POGKQ9P215 609 aa26.18■■□□□ 1.78
CDC42-204ENST00000411827 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
CDC42-204ENST00000411827 XRN1Q8IZH2 1706 aaKnown RBP26.17■■□□□ 1.78
CDC42-204ENST00000411827 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
CDC42-204ENST00000411827 ST20-MTHFSA0A0A6YYL1 179 aa26.16■■□□□ 1.78
CDC42-204ENST00000411827 PRAM1Q96QH2 718 aa26.13■■□□□ 1.77
CDC42-204ENST00000411827 NCOA3Q9Y6Q9 1424 aa26.13■■□□□ 1.77
CDC42-204ENST00000411827 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
CDC42-204ENST00000411827 ROBO2Q9HCK4 1378 aa26.11■■□□□ 1.77
CDC42-204ENST00000411827 CDCA8Q53HL2 280 aa26.1■■□□□ 1.77
CDC42-204ENST00000411827 TMF1P82094 1093 aa26.08■■□□□ 1.77
CDC42-204ENST00000411827 PUS7Q96PZ0 661 aaKnown RBP26.07■■□□□ 1.76
CDC42-204ENST00000411827 TESK2Q96S53 571 aa26.07■■□□□ 1.76
CDC42-204ENST00000411827 PROSER2Q86WR7 435 aaPredicted RBP26.06■■□□□ 1.76
CDC42-204ENST00000411827 WAPLQ7Z5K2 1190 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms