RNA–Protein interactions for RNA: ENST00000411650.5

UBP1-203, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 859 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-203ENST00000411650 CEP164Q9UPV0 1460 aa8.82□□□□□ -1
UBP1-203ENST00000411650 PPP4CP60510 307 aa8.8□□□□□ -1
UBP1-203ENST00000411650 KCNC4Q03721 635 aa8.8□□□□□ -1
UBP1-203ENST00000411650 FANCD2Q9BXW9 1451 aa8.8□□□□□ -1
UBP1-203ENST00000411650 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
UBP1-203ENST00000411650 PTGDRQ13258 359 aa8.77□□□□□ -1.01
UBP1-203ENST00000411650 TJAP1Q5JTD0 557 aa8.77□□□□□ -1.01
UBP1-203ENST00000411650 EYA1Q99502 592 aa8.77□□□□□ -1.01
UBP1-203ENST00000411650 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
UBP1-203ENST00000411650 SWT1Q5T5J6 900 aaKnown RBP8.75□□□□□ -1.01
UBP1-203ENST00000411650 P3H3Q8IVL6 736 aa8.75□□□□□ -1.01
UBP1-203ENST00000411650 CFTRP13569 1480 aa8.75□□□□□ -1.01
UBP1-203ENST00000411650 SEMA3EO15041 775 aa8.74□□□□□ -1.01
UBP1-203ENST00000411650 RNF40O75150 1001 aa8.74□□□□□ -1.01
UBP1-203ENST00000411650 APLP1P51693 650 aa8.74□□□□□ -1.01
UBP1-203ENST00000411650 WDR62O43379 1518 aa8.74□□□□□ -1.01
UBP1-203ENST00000411650 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
UBP1-203ENST00000411650 MTRQ99707 1265 aa8.73□□□□□ -1.01
UBP1-203ENST00000411650 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
UBP1-203ENST00000411650 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
UBP1-203ENST00000411650 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
UBP1-203ENST00000411650 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
UBP1-203ENST00000411650 ADGRG1Q9Y653 693 aa8.7□□□□□ -1.02
UBP1-203ENST00000411650 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
UBP1-203ENST00000411650 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
UBP1-203ENST00000411650 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
UBP1-203ENST00000411650 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
UBP1-203ENST00000411650 URB2Q14146 1524 aaKnown RBP8.68□□□□□ -1.02
UBP1-203ENST00000411650 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
UBP1-203ENST00000411650 DNAJB2P25686 324 aa8.66□□□□□ -1.02
UBP1-203ENST00000411650 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
UBP1-203ENST00000411650 TMEM134Q9H6X4 195 aa8.66□□□□□ -1.02
UBP1-203ENST00000411650 FCHSD2O94868 740 aa8.65□□□□□ -1.02
UBP1-203ENST00000411650 NKX2-3Q8TAU0 364 aa8.65□□□□□ -1.02
UBP1-203ENST00000411650 RBM46Q8TBY0 533 aaKnown RBP8.65□□□□□ -1.02
UBP1-203ENST00000411650 RCCD1A6NED2 376 aa8.64□□□□□ -1.03
UBP1-203ENST00000411650 COPS2P61201 443 aa8.64□□□□□ -1.03
UBP1-203ENST00000411650 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
UBP1-203ENST00000411650 IFT140Q96RY7 1462 aa8.64□□□□□ -1.03
UBP1-203ENST00000411650 SUPT5HO00267 1087 aaKnown RBP8.63□□□□□ -1.03
UBP1-203ENST00000411650 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
UBP1-203ENST00000411650 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
UBP1-203ENST00000411650 CYB5RLQ6IPT4 315 aa8.62□□□□□ -1.03
UBP1-203ENST00000411650 GPR37O15354 613 aa8.61□□□□□ -1.03
UBP1-203ENST00000411650 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
UBP1-203ENST00000411650 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
UBP1-203ENST00000411650 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
UBP1-203ENST00000411650 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 ZNF608Q9ULD9 1512 aaPredicted RBP8.59□□□□□ -1.03
UBP1-203ENST00000411650 ZPR1O75312 459 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 FECHP22830 423 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 HIC1Q14526 733 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 BLOC1S3Q6QNY0 202 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 CHMP7Q8WUX9 453 aaPredicted RBP8.59□□□□□ -1.03
UBP1-203ENST00000411650 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
UBP1-203ENST00000411650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
UBP1-203ENST00000411650 SLC10A3P09131 477 aa8.58□□□□□ -1.04
UBP1-203ENST00000411650 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
UBP1-203ENST00000411650 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.044e-12■■■□□ 18.4
UBP1-203ENST00000411650 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
UBP1-203ENST00000411650 SOGA1O94964 1423 aa8.57□□□□□ -1.04
UBP1-203ENST00000411650 CFHP08603 1231 aa8.57□□□□□ -1.04
UBP1-203ENST00000411650 METTL3Q86U44 580 aaKnown RBP8.57□□□□□ -1.04
UBP1-203ENST00000411650 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
UBP1-203ENST00000411650 GNPATO15228 680 aa8.55□□□□□ -1.04
UBP1-203ENST00000411650 TLL1O43897 1013 aa8.55□□□□□ -1.04
UBP1-203ENST00000411650 OATP04181 439 aa8.55□□□□□ -1.04
UBP1-203ENST00000411650 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
UBP1-203ENST00000411650 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
UBP1-203ENST00000411650 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
UBP1-203ENST00000411650 DNMBPQ6XZF7 1577 aa8.55□□□□□ -1.04
UBP1-203ENST00000411650 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
UBP1-203ENST00000411650 LCE2BO14633 110 aa8.53□□□□□ -1.04
UBP1-203ENST00000411650 Q6ZNB5 142 aa8.53□□□□□ -1.04
UBP1-203ENST00000411650 TMUB1Q9BVT8 246 aa8.52□□□□□ -1.05
UBP1-203ENST00000411650 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 RIMBP3CA6NJZ7 1639 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 RIMBP3BA6NNM3 1639 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 RIMBP3Q9UFD9 1639 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 GFRA3O60609 400 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 GGCXP38435 758 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 LAPTM4AQ15012 233 aa8.51□□□□□ -1.05
UBP1-203ENST00000411650 EMID1Q96A84 441 aaPredicted RBP8.51□□□□□ -1.05
UBP1-203ENST00000411650 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
UBP1-203ENST00000411650 POLA1P09884 1462 aaPredicted RBP8.51□□□□□ -1.05
UBP1-203ENST00000411650 ARHGEF11O15085 1522 aa8.5□□□□□ -1.05
UBP1-203ENST00000411650 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
UBP1-203ENST00000411650 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
UBP1-203ENST00000411650 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
UBP1-203ENST00000411650 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
UBP1-203ENST00000411650 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
UBP1-203ENST00000411650 NRG2O14511 850 aaPredicted RBP8.47□□□□□ -1.05
UBP1-203ENST00000411650 S1PR4O95977 384 aa8.47□□□□□ -1.05
UBP1-203ENST00000411650 DAXXQ9UER7 740 aaPredicted RBP8.47□□□□□ -1.05
UBP1-203ENST00000411650 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
UBP1-203ENST00000411650 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
UBP1-203ENST00000411650 NR1I2O75469 434 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms