RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
ERGIC3-204ENST00000411577 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-204ENST00000411577 LTBP4Q8N2S1 1624 aa13.66□□□□□ -0.22
ERGIC3-204ENST00000411577 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
ERGIC3-204ENST00000411577 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-204ENST00000411577 HSPA1LP34931 641 aa13.65□□□□□ -0.22
ERGIC3-204ENST00000411577 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
ERGIC3-204ENST00000411577 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
ERGIC3-204ENST00000411577 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
ERGIC3-204ENST00000411577 PPP1R15AO75807 674 aaPredicted RBP13.63□□□□□ -0.23
ERGIC3-204ENST00000411577 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
ERGIC3-204ENST00000411577 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-204ENST00000411577 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
ERGIC3-204ENST00000411577 BCANQ96GW7 911 aa13.62□□□□□ -0.23
ERGIC3-204ENST00000411577 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
ERGIC3-204ENST00000411577 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
ERGIC3-204ENST00000411577 TMEM131LA2VDJ0 1609 aa13.61□□□□□ -0.23
ERGIC3-204ENST00000411577 TRPM2O94759 1503 aa13.6□□□□□ -0.23
ERGIC3-204ENST00000411577 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
ERGIC3-204ENST00000411577 PLEKHG1Q9ULL1 1385 aa13.59□□□□□ -0.23
ERGIC3-204ENST00000411577 RPGRIP1LQ68CZ1 1315 aa13.59□□□□□ -0.23
ERGIC3-204ENST00000411577 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
ERGIC3-204ENST00000411577 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
ERGIC3-204ENST00000411577 IQGAP1P46940 1657 aa13.58□□□□□ -0.24
ERGIC3-204ENST00000411577 NUTM2DQ5VT03 806 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-204ENST00000411577 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
ERGIC3-204ENST00000411577 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
ERGIC3-204ENST00000411577 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
ERGIC3-204ENST00000411577 TOM1O60784 492 aa13.56□□□□□ -0.24
ERGIC3-204ENST00000411577 KCNA6P17658 529 aa13.56□□□□□ -0.24
ERGIC3-204ENST00000411577 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
ERGIC3-204ENST00000411577 CPS1P31327 1500 aa13.55□□□□□ -0.24
ERGIC3-204ENST00000411577 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
ERGIC3-204ENST00000411577 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
ERGIC3-204ENST00000411577 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
ERGIC3-204ENST00000411577 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
ERGIC3-204ENST00000411577 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
ERGIC3-204ENST00000411577 ADAMTS13Q76LX8 1427 aa13.49□□□□□ -0.25
ERGIC3-204ENST00000411577 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
ERGIC3-204ENST00000411577 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
ERGIC3-204ENST00000411577 KIF1BO60333 1816 aa13.48□□□□□ -0.25
ERGIC3-204ENST00000411577 NEXMIFQ5QGS0 1516 aa13.47□□□□□ -0.25
ERGIC3-204ENST00000411577 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
ERGIC3-204ENST00000411577 DIP2AQ14689 1571 aa13.46□□□□□ -0.25
ERGIC3-204ENST00000411577 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
ERGIC3-204ENST00000411577 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
ERGIC3-204ENST00000411577 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
ERGIC3-204ENST00000411577 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-204ENST00000411577 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
ERGIC3-204ENST00000411577 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
ERGIC3-204ENST00000411577 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
ERGIC3-204ENST00000411577 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
ERGIC3-204ENST00000411577 METP08581 1390 aa13.42□□□□□ -0.26
ERGIC3-204ENST00000411577 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
ERGIC3-204ENST00000411577 RGS17Q9UGC6 210 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-204ENST00000411577 PTPRUQ92729 1446 aa13.4□□□□□ -0.26
ERGIC3-204ENST00000411577 RBM33Q96EV2 1170 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-204ENST00000411577 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 MSH6P52701 1360 aa13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
ERGIC3-204ENST00000411577 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
ERGIC3-204ENST00000411577 PPLO60437 1756 aa13.37□□□□□ -0.27
ERGIC3-204ENST00000411577 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
ERGIC3-204ENST00000411577 MYOM2P54296 1465 aa13.36□□□□□ -0.27
ERGIC3-204ENST00000411577 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
ERGIC3-204ENST00000411577 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-204ENST00000411577 ATF3P18847 181 aa13.35□□□□□ -0.27
ERGIC3-204ENST00000411577 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
ERGIC3-204ENST00000411577 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
ERGIC3-204ENST00000411577 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
ERGIC3-204ENST00000411577 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
ERGIC3-204ENST00000411577 SLAIN2Q9P270 581 aa13.34□□□□□ -0.27
ERGIC3-204ENST00000411577 LRPPRCP42704 1394 aaKnown RBP13.33□□□□□ -0.27
ERGIC3-204ENST00000411577 ABCC11Q96J66 1382 aa13.33□□□□□ -0.27
ERGIC3-204ENST00000411577 TMEM132EQ6IEE7 984 aa13.33□□□□□ -0.28
ERGIC3-204ENST00000411577 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
ERGIC3-204ENST00000411577 STK26Q9P289 416 aa13.33□□□□□ -0.28
ERGIC3-204ENST00000411577 PTCH1Q13635 1447 aa13.32□□□□□ -0.28
ERGIC3-204ENST00000411577 FAM135BQ49AJ0 1406 aa13.32□□□□□ -0.28
ERGIC3-204ENST00000411577 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
ERGIC3-204ENST00000411577 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
ERGIC3-204ENST00000411577 XRN1Q8IZH2 1706 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-204ENST00000411577 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
ERGIC3-204ENST00000411577 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
ERGIC3-204ENST00000411577 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
ERGIC3-204ENST00000411577 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
ERGIC3-204ENST00000411577 DCCP43146 1447 aa13.3□□□□□ -0.28
ERGIC3-204ENST00000411577 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-204ENST00000411577 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
ERGIC3-204ENST00000411577 TECPR2O15040 1411 aa13.29□□□□□ -0.28
ERGIC3-204ENST00000411577 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-204ENST00000411577 SETD1AO15047 1707 aaKnown RBP13.28□□□□□ -0.28
ERGIC3-204ENST00000411577 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
ERGIC3-204ENST00000411577 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.29
ERGIC3-204ENST00000411577 LAMC1P11047 1609 aa13.25□□□□□ -0.29
ERGIC3-204ENST00000411577 POGKQ9P215 609 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms