RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 TIMELESSQ9UNS1 1208 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 ONECUT3O60422 494 aaPredicted RBP7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 EYA1Q99502 592 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 TOP2BQ02880 1626 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 KCNH8Q96L42 1107 aa7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 FAM217BQ9NTX9 383 aaPredicted RBP7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 SSTR3P32745 418 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 KCNK17Q96T54 332 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 TARBP1Q13395 1621 aaKnown RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 ERBB3P21860 1342 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 ST18O60284 1047 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 RAD54L2Q9Y4B4 1467 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 SOGA1O94964 1423 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 RCCD1A6NED2 376 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 VARS2Q5ST30 1063 aaKnown RBP7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 NUDT18Q6ZVK8 323 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 NLRP7Q8WX94 980 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 TATDN2Q93075 761 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 WDR97A6NE52 1622 aa7.34□□□□□ -1.24
RN7SKP235-201ENST00000410662 C3orf80F5H4A9 247 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 ARHGAP33O14559 1287 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 DNAJB2P25686 324 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 PBX2P40425 430 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 BEGAINQ9BUH8 593 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 PSEN2P49810 448 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 EMP3P54852 163 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 POTEEQ6S8J3 1075 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 TMEM134Q9H6X4 195 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 SULF1Q8IWU6 871 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 PCMTD1Q96MG8 357 aaPredicted RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 TDRD9Q8NDG6 1382 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 CD46P15529 392 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 DIXDC1Q155Q3 683 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 MARVELD3Q96A59 401 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 SMAPO00193 183 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM205CA6NFA0 338 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 MYSM1Q5VVJ2 828 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 AXIN2Q9Y2T1 843 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM163AQ96GL9 167 aaPredicted RBP7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 HS3ST6Q96QI5 342 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 TBC1D2Q9BYX2 928 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 TK2O00142 265 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 POTEB3A0JP26 581 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 BHMG1C9JSJ3 638 aaPredicted RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM98CQ17RN3 349 aaKnown RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 POTEBQ6S5H4 581 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 SPIRE2Q8WWL2 714 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 CHD1O14646 1710 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 GRIN2BQ13224 1484 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 CLK2P49760 499 aaKnown RBP7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 RSPH4AQ5TD94 716 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 NBPF3Q9H094 633 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 SEPT9Q9UHD8 586 aaPredicted RBP7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 SNAPC4Q5SXM2 1469 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 KIF27Q86VH2 1401 aa7.21□□□□□ -1.25
RN7SKP235-201ENST00000410662 GJA5P36382 358 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 FLIIQ13045 1269 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 PROCA1Q8NCQ7 364 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 POLR3EQ9NVU0 708 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 ERICH3Q5RHP9 1530 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 MAGI1Q96QZ7 1491 aaPredicted RBP7.2□□□□□ -1.26
RN7SKP235-201ENST00000410662 HDGFP51858 240 aaKnown RBP7.2□□□□□ -1.26
RN7SKP235-201ENST00000410662 NUTM1Q86Y26 1132 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms