RNA–Protein interactions for RNA: ENST00000410049.1

C2orf49-202, Transcript of chromosome 2 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C2orf49, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf49-202ENST00000410049 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
C2orf49-202ENST00000410049 CHD2O14647 1828 aaKnown RBP26.28■■□□□ 1.8
C2orf49-202ENST00000410049 NKTRP30414 1462 aaKnown RBP26.26■■□□□ 1.79
C2orf49-202ENST00000410049 ZFYVE9O95405 1425 aa26.26■■□□□ 1.79
C2orf49-202ENST00000410049 HDGFP51858 240 aaKnown RBP26.26■■□□□ 1.79
C2orf49-202ENST00000410049 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
C2orf49-202ENST00000410049 UNC13BO14795 1591 aa26.25■■□□□ 1.79
C2orf49-202ENST00000410049 PLEKHG1Q9ULL1 1385 aa26.23■■□□□ 1.79
C2orf49-202ENST00000410049 ROBO1Q9Y6N7 1651 aa26.22■■□□□ 1.79
C2orf49-202ENST00000410049 ROCK1Q13464 1354 aa26.21■■□□□ 1.79
C2orf49-202ENST00000410049 E9PCH4 1651 aa26.2■■□□□ 1.78
C2orf49-202ENST00000410049 RIMS2Q9UQ26 1411 aa26.2■■□□□ 1.78
C2orf49-202ENST00000410049 BCANQ96GW7 911 aa26.19■■□□□ 1.78
C2orf49-202ENST00000410049 RGS17Q9UGC6 210 aaPredicted RBP26.19■■□□□ 1.78
C2orf49-202ENST00000410049 RBM33Q96EV2 1170 aaKnown RBP26.18■■□□□ 1.78
C2orf49-202ENST00000410049 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
C2orf49-202ENST00000410049 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
C2orf49-202ENST00000410049 IQGAP3Q86VI3 1631 aa26.17■■□□□ 1.78
C2orf49-202ENST00000410049 MSH6P52701 1360 aa26.16■■□□□ 1.78
C2orf49-202ENST00000410049 NCOA3Q9Y6Q9 1424 aa26.14■■□□□ 1.78
C2orf49-202ENST00000410049 PPP1R15AO75807 674 aaPredicted RBP26.13■■□□□ 1.77
C2orf49-202ENST00000410049 SLAIN2Q9P270 581 aa26.13■■□□□ 1.77
C2orf49-202ENST00000410049 DIP2AQ14689 1571 aa26.09■■□□□ 1.77
C2orf49-202ENST00000410049 PIK3R4Q99570 1358 aa26.08■■□□□ 1.77
C2orf49-202ENST00000410049 PHLPP1O60346 1717 aa26.08■■□□□ 1.77
C2orf49-202ENST00000410049 ADAMTS13Q76LX8 1427 aa26.08■■□□□ 1.77
C2orf49-202ENST00000410049 CHGAP10645 457 aaKnown RBP26.08■■□□□ 1.77
C2orf49-202ENST00000410049 NUP155O75694 1391 aa26.06■■□□□ 1.76
C2orf49-202ENST00000410049 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.02■■□□□ 1.76
C2orf49-202ENST00000410049 NUTM2DQ5VT03 806 aaPredicted RBP26.01■■□□□ 1.75
C2orf49-202ENST00000410049 POTEAQ6S8J7 498 aa26.01■■□□□ 1.75
C2orf49-202ENST00000410049 JCADQ9P266 1359 aa26■■□□□ 1.75
C2orf49-202ENST00000410049 C19orf44Q9H6X5 657 aa26■■□□□ 1.75
C2orf49-202ENST00000410049 TRPM2O94759 1503 aa25.98■■□□□ 1.75
C2orf49-202ENST00000410049 SPHKAPQ2M3C7 1700 aa25.98■■□□□ 1.75
C2orf49-202ENST00000410049 CADPS2Q86UW7 1296 aa25.98■■□□□ 1.75
C2orf49-202ENST00000410049 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
C2orf49-202ENST00000410049 ITGAEP38570 1179 aa25.96■■□□□ 1.75
C2orf49-202ENST00000410049 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
C2orf49-202ENST00000410049 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
C2orf49-202ENST00000410049 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
C2orf49-202ENST00000410049 ATF3P18847 181 aa25.93■■□□□ 1.74
C2orf49-202ENST00000410049 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
C2orf49-202ENST00000410049 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
C2orf49-202ENST00000410049 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
C2orf49-202ENST00000410049 SPATA31A6Q5VVP1 1343 aa25.89■■□□□ 1.74
C2orf49-202ENST00000410049 XRN1Q8IZH2 1706 aaKnown RBP25.89■■□□□ 1.74
C2orf49-202ENST00000410049 DCCP43146 1447 aa25.88■■□□□ 1.73
C2orf49-202ENST00000410049 SHPRHQ149N8 1683 aa25.88■■□□□ 1.73
C2orf49-202ENST00000410049 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
C2orf49-202ENST00000410049 KIF1BO60333 1816 aa25.86■■□□□ 1.73
C2orf49-202ENST00000410049 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
C2orf49-202ENST00000410049 BRINP3Q76B58 766 aa25.84■■□□□ 1.73
C2orf49-202ENST00000410049 RRBP1Q9P2E9 1410 aaKnown RBP25.82■■□□□ 1.72
C2orf49-202ENST00000410049 CLTCL1P53675 1640 aa25.82■■□□□ 1.72
C2orf49-202ENST00000410049 LRP6O75581 1613 aa25.81■■□□□ 1.72
C2orf49-202ENST00000410049 METP08581 1390 aa25.81■■□□□ 1.72
C2orf49-202ENST00000410049 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
C2orf49-202ENST00000410049 NAIPQ13075 1403 aa25.79■■□□□ 1.72
C2orf49-202ENST00000410049 MST1RQ04912 1400 aa25.78■■□□□ 1.72
C2orf49-202ENST00000410049 ZNF772Q68DY9 489 aaPredicted RBP25.77■■□□□ 1.72
C2orf49-202ENST00000410049 NHSL1Q5SYE7 1610 aa25.77■■□□□ 1.72
C2orf49-202ENST00000410049 SETD1AO15047 1707 aaKnown RBP25.75■■□□□ 1.71
C2orf49-202ENST00000410049 ASXL1Q8IXJ9 1541 aa25.75■■□□□ 1.71
C2orf49-202ENST00000410049 SETD5Q9C0A6 1442 aa25.75■■□□□ 1.71
C2orf49-202ENST00000410049 MEX3CQ5U5Q3 659 aaKnown RBP25.74■■□□□ 1.71
C2orf49-202ENST00000410049 ADGRL3Q9HAR2 1447 aa25.73■■□□□ 1.71
C2orf49-202ENST00000410049 NALCNQ8IZF0 1738 aa25.71■■□□□ 1.71
C2orf49-202ENST00000410049 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
C2orf49-202ENST00000410049 LRRC59Q96AG4 307 aaKnown RBP25.7■■□□□ 1.7
C2orf49-202ENST00000410049 RPGRIP1LQ68CZ1 1315 aa25.67■■□□□ 1.7
C2orf49-202ENST00000410049 HFM1A2PYH4 1435 aa25.67■■□□□ 1.7
C2orf49-202ENST00000410049 PPLO60437 1756 aa25.64■■□□□ 1.7
C2orf49-202ENST00000410049 PTCH1Q13635 1447 aa25.64■■□□□ 1.7
C2orf49-202ENST00000410049 LAMC1P11047 1609 aa25.64■■□□□ 1.7
C2orf49-202ENST00000410049 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
C2orf49-202ENST00000410049 NUTM2BA6NNL0 878 aaPredicted RBP25.63■■□□□ 1.69
C2orf49-202ENST00000410049 NUTM2EB1AL46 878 aaPredicted RBP25.63■■□□□ 1.69
C2orf49-202ENST00000410049 RXRBP28702 533 aa25.63■■□□□ 1.69
C2orf49-202ENST00000410049 NUTM2AQ8IVF1 878 aaPredicted RBP25.63■■□□□ 1.69
C2orf49-202ENST00000410049 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
C2orf49-202ENST00000410049 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
C2orf49-202ENST00000410049 CDK12Q9NYV4 1490 aaPredicted RBP25.61■■□□□ 1.69
C2orf49-202ENST00000410049 SLC4A1APQ9BWU0 796 aaKnown RBP25.6■■□□□ 1.69
C2orf49-202ENST00000410049 PNPLA6Q8IY17 1366 aa25.59■■□□□ 1.69
C2orf49-202ENST00000410049 UPF1Q92900 1129 aaKnown RBP eCLIP25.59■■□□□ 1.69
C2orf49-202ENST00000410049 AFF2P51816 1311 aa25.59■■□□□ 1.69
C2orf49-202ENST00000410049 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
C2orf49-202ENST00000410049 DDX17Q92841 729 aaKnown RBP25.58■■□□□ 1.69
C2orf49-202ENST00000410049 SOS2Q07890 1332 aaPredicted RBP25.55■■□□□ 1.68
C2orf49-202ENST00000410049 ORAI2Q96SN7 254 aa25.52■■□□□ 1.68
C2orf49-202ENST00000410049 C8orf37Q96NL8 207 aa25.51■■□□□ 1.67
C2orf49-202ENST00000410049 QTRT2Q9H974 415 aaKnown RBP25.51■■□□□ 1.67
C2orf49-202ENST00000410049 RBM6P78332 1123 aaKnown RBP25.48■■□□□ 1.67
C2orf49-202ENST00000410049 IFT172Q9UG01 1749 aa25.46■■□□□ 1.67
C2orf49-202ENST00000410049 COL22A1Q8NFW1 1626 aaPredicted RBP25.45■■□□□ 1.67
C2orf49-202ENST00000410049 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
C2orf49-202ENST00000410049 FOXD1Q16676 465 aa25.44■■□□□ 1.66
C2orf49-202ENST00000410049 NGLY1Q96IV0 654 aa25.44■■□□□ 1.66
C2orf49-202ENST00000410049 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms