RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
LSM5-207ENST00000410044 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
LSM5-207ENST00000410044 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
LSM5-207ENST00000410044 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
LSM5-207ENST00000410044 IFT172Q9UG01 1749 aa22■■□□□ 1.11
LSM5-207ENST00000410044 PPLO60437 1756 aa21.99■■□□□ 1.11
LSM5-207ENST00000410044 RIMS2Q9UQ26 1411 aa21.99■■□□□ 1.11
LSM5-207ENST00000410044 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
LSM5-207ENST00000410044 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
LSM5-207ENST00000410044 LTKP29376 864 aa21.96■■□□□ 1.11
LSM5-207ENST00000410044 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
LSM5-207ENST00000410044 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
LSM5-207ENST00000410044 EID1Q9Y6B2 187 aa21.96■■□□□ 1.11
LSM5-207ENST00000410044 TXNDC2Q86VQ3 553 aa21.95■■□□□ 1.1
LSM5-207ENST00000410044 HSPA2P54652 639 aa21.94■■□□□ 1.1
LSM5-207ENST00000410044 MYOM2P54296 1465 aa21.94■■□□□ 1.1
LSM5-207ENST00000410044 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
LSM5-207ENST00000410044 NRXN1Q9ULB1 1477 aa21.92■■□□□ 1.1
LSM5-207ENST00000410044 MED14O60244 1454 aa21.9■■□□□ 1.1
LSM5-207ENST00000410044 ADGRF5Q8IZF2 1346 aa21.9■■□□□ 1.1
LSM5-207ENST00000410044 PPP1R15AO75807 674 aaPredicted RBP21.9■■□□□ 1.1
LSM5-207ENST00000410044 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
LSM5-207ENST00000410044 PLEKHG1Q9ULL1 1385 aa21.89■■□□□ 1.1
LSM5-207ENST00000410044 POLR1AO95602 1720 aaPredicted RBP21.89■■□□□ 1.09
LSM5-207ENST00000410044 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
LSM5-207ENST00000410044 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
LSM5-207ENST00000410044 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
LSM5-207ENST00000410044 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
LSM5-207ENST00000410044 SETBP1Q9Y6X0 1596 aa21.84■■□□□ 1.09
LSM5-207ENST00000410044 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
LSM5-207ENST00000410044 NPHP4O75161 1426 aaPredicted RBP21.83■■□□□ 1.09
LSM5-207ENST00000410044 C14orf93Q9H972 538 aaKnown RBP21.83■■□□□ 1.09
LSM5-207ENST00000410044 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
LSM5-207ENST00000410044 NBPF8Q3BBV2 869 aa21.82■■□□□ 1.08
LSM5-207ENST00000410044 NRXN3Q9Y4C0 1643 aa21.81■■□□□ 1.08
LSM5-207ENST00000410044 TBX22Q9Y458 520 aa21.81■■□□□ 1.08
LSM5-207ENST00000410044 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
LSM5-207ENST00000410044 KIAA1210Q9ULL0 1709 aa21.8■■□□□ 1.08
LSM5-207ENST00000410044 IQGAP1P46940 1657 aa21.79■■□□□ 1.08
LSM5-207ENST00000410044 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
LSM5-207ENST00000410044 ALKQ9UM73 1620 aa21.78■■□□□ 1.08
LSM5-207ENST00000410044 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
LSM5-207ENST00000410044 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
LSM5-207ENST00000410044 LAMC1P11047 1609 aa21.77■■□□□ 1.07
LSM5-207ENST00000410044 SETD1AO15047 1707 aaKnown RBP21.76■■□□□ 1.07
LSM5-207ENST00000410044 BCANQ96GW7 911 aa21.75■■□□□ 1.07
LSM5-207ENST00000410044 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
LSM5-207ENST00000410044 SLC26A8Q96RN1 970 aa21.74■■□□□ 1.07
LSM5-207ENST00000410044 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
LSM5-207ENST00000410044 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
LSM5-207ENST00000410044 GPRASP1Q5JY77 1395 aa21.71■■□□□ 1.07
LSM5-207ENST00000410044 RALGAPBQ86X10 1494 aa21.71■■□□□ 1.07
LSM5-207ENST00000410044 METP08581 1390 aa21.7■■□□□ 1.06
LSM5-207ENST00000410044 ADGRB1O14514 1584 aa21.7■■□□□ 1.06
LSM5-207ENST00000410044 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
LSM5-207ENST00000410044 CHD2O14647 1828 aaKnown RBP21.67■■□□□ 1.06
LSM5-207ENST00000410044 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
LSM5-207ENST00000410044 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
LSM5-207ENST00000410044 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
LSM5-207ENST00000410044 PTPRUQ92729 1446 aa21.64■■□□□ 1.06
LSM5-207ENST00000410044 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
LSM5-207ENST00000410044 ABCC11Q96J66 1382 aa21.64■■□□□ 1.06
LSM5-207ENST00000410044 KCNA6P17658 529 aa21.64■■□□□ 1.05
LSM5-207ENST00000410044 SIRT1Q96EB6 747 aa21.64■■□□□ 1.05
LSM5-207ENST00000410044 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
LSM5-207ENST00000410044 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
LSM5-207ENST00000410044 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
LSM5-207ENST00000410044 TECPR2O15040 1411 aa21.61■■□□□ 1.05
LSM5-207ENST00000410044 NWD1Q149M9 1564 aa21.6■■□□□ 1.05
LSM5-207ENST00000410044 XRN1Q8IZH2 1706 aaKnown RBP21.6■■□□□ 1.05
LSM5-207ENST00000410044 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
LSM5-207ENST00000410044 DLC1Q96QB1 1528 aa21.59■■□□□ 1.05
LSM5-207ENST00000410044 STRCP1A6NGW2 1772 aa21.56■■□□□ 1.04
LSM5-207ENST00000410044 STK26Q9P289 416 aa21.56■■□□□ 1.04
LSM5-207ENST00000410044 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
LSM5-207ENST00000410044 TRAK1Q9UPV9 953 aa21.55■■□□□ 1.04
LSM5-207ENST00000410044 CPS1P31327 1500 aa21.55■■□□□ 1.04
LSM5-207ENST00000410044 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
LSM5-207ENST00000410044 ZNF335Q9H4Z2 1342 aaPredicted RBP21.54■■□□□ 1.04
LSM5-207ENST00000410044 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
LSM5-207ENST00000410044 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.04
LSM5-207ENST00000410044 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
LSM5-207ENST00000410044 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
LSM5-207ENST00000410044 NCOA3Q9Y6Q9 1424 aa21.49■■□□□ 1.03
LSM5-207ENST00000410044 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
LSM5-207ENST00000410044 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
LSM5-207ENST00000410044 USP47Q96K76 1375 aa21.48■■□□□ 1.03
LSM5-207ENST00000410044 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
LSM5-207ENST00000410044 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
LSM5-207ENST00000410044 WAPLQ7Z5K2 1190 aa21.47■■□□□ 1.03
LSM5-207ENST00000410044 POGKQ9P215 609 aa21.46■■□□□ 1.03
LSM5-207ENST00000410044 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
LSM5-207ENST00000410044 PLEKHH1Q9ULM0 1364 aa21.46■■□□□ 1.03
LSM5-207ENST00000410044 LRRC7Q96NW7 1537 aa21.45■■□□□ 1.02
LSM5-207ENST00000410044 ST20-MTHFSA0A0A6YYL1 179 aa21.45■■□□□ 1.02
LSM5-207ENST00000410044 SBNO2Q9Y2G9 1366 aa21.45■■□□□ 1.02
LSM5-207ENST00000410044 SLC24A1O60721 1099 aa21.44■■□□□ 1.02
LSM5-207ENST00000410044 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
LSM5-207ENST00000410044 TMEM94Q12767 1356 aa21.42■■□□□ 1.02
LSM5-207ENST00000410044 XIRP1Q702N8 1843 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms