RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
GCFC2-202ENST00000409857 IFT172Q9UG01 1749 aa23.99■■□□□ 1.43
GCFC2-202ENST00000409857 TMEM2Q9UHN6 1383 aa23.98■■□□□ 1.43
GCFC2-202ENST00000409857 PPLO60437 1756 aa23.98■■□□□ 1.43
GCFC2-202ENST00000409857 CHGAP10645 457 aaKnown RBP23.98■■□□□ 1.43
GCFC2-202ENST00000409857 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
GCFC2-202ENST00000409857 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
GCFC2-202ENST00000409857 ZFYVE9O95405 1425 aa23.96■■□□□ 1.43
GCFC2-202ENST00000409857 NEXMIFQ5QGS0 1516 aa23.96■■□□□ 1.43
GCFC2-202ENST00000409857 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
GCFC2-202ENST00000409857 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
GCFC2-202ENST00000409857 HDGFP51858 240 aaKnown RBP23.91■■□□□ 1.42
GCFC2-202ENST00000409857 ZNF326Q5BKZ1 582 aaKnown RBP23.91■■□□□ 1.42
GCFC2-202ENST00000409857 STRCQ7RTU9 1775 aa23.9■■□□□ 1.42
GCFC2-202ENST00000409857 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.9■■□□□ 1.42
GCFC2-202ENST00000409857 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
GCFC2-202ENST00000409857 HSPA2P54652 639 aa23.88■■□□□ 1.41
GCFC2-202ENST00000409857 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
GCFC2-202ENST00000409857 MED14O60244 1454 aa23.88■■□□□ 1.41
GCFC2-202ENST00000409857 MYOM2P54296 1465 aa23.88■■□□□ 1.41
GCFC2-202ENST00000409857 RGL3Q3MIN7 710 aa23.87■■□□□ 1.41
GCFC2-202ENST00000409857 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
GCFC2-202ENST00000409857 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
GCFC2-202ENST00000409857 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
GCFC2-202ENST00000409857 LTKP29376 864 aa23.84■■□□□ 1.41
GCFC2-202ENST00000409857 VGFO15240 615 aaPredicted RBP23.83■■□□□ 1.41
GCFC2-202ENST00000409857 TIMELESSQ9UNS1 1208 aa23.83■■□□□ 1.41
GCFC2-202ENST00000409857 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
GCFC2-202ENST00000409857 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.4
GCFC2-202ENST00000409857 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
GCFC2-202ENST00000409857 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
GCFC2-202ENST00000409857 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
GCFC2-202ENST00000409857 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
GCFC2-202ENST00000409857 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
GCFC2-202ENST00000409857 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
GCFC2-202ENST00000409857 NPHP4O75161 1426 aaPredicted RBP23.79■■□□□ 1.4
GCFC2-202ENST00000409857 NCKAP5LQ9HCH0 1330 aa23.79■■□□□ 1.4
GCFC2-202ENST00000409857 DCAF11Q8TEB1 546 aa23.79■■□□□ 1.4
GCFC2-202ENST00000409857 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
GCFC2-202ENST00000409857 DIP2AQ14689 1571 aa23.77■■□□□ 1.4
GCFC2-202ENST00000409857 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
GCFC2-202ENST00000409857 LAMC1P11047 1609 aa23.76■■□□□ 1.39
GCFC2-202ENST00000409857 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
GCFC2-202ENST00000409857 ADGRF5Q8IZF2 1346 aa23.75■■□□□ 1.39
GCFC2-202ENST00000409857 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
GCFC2-202ENST00000409857 SETD1AO15047 1707 aaKnown RBP23.74■■□□□ 1.39
GCFC2-202ENST00000409857 KIAA1210Q9ULL0 1709 aa23.73■■□□□ 1.39
GCFC2-202ENST00000409857 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
GCFC2-202ENST00000409857 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
GCFC2-202ENST00000409857 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
GCFC2-202ENST00000409857 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
GCFC2-202ENST00000409857 TBX22Q9Y458 520 aa23.67■■□□□ 1.38
GCFC2-202ENST00000409857 TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
GCFC2-202ENST00000409857 BCANQ96GW7 911 aa23.65■■□□□ 1.38
GCFC2-202ENST00000409857 C14orf93Q9H972 538 aaKnown RBP23.65■■□□□ 1.38
GCFC2-202ENST00000409857 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
GCFC2-202ENST00000409857 CHD2O14647 1828 aaKnown RBP23.64■■□□□ 1.37
GCFC2-202ENST00000409857 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
GCFC2-202ENST00000409857 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
GCFC2-202ENST00000409857 ASXL1Q8IXJ9 1541 aa23.6■■□□□ 1.37
GCFC2-202ENST00000409857 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
GCFC2-202ENST00000409857 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
GCFC2-202ENST00000409857 NBPF8Q3BBV2 869 aa23.58■■□□□ 1.37
GCFC2-202ENST00000409857 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
GCFC2-202ENST00000409857 METP08581 1390 aa23.58■■□□□ 1.36
GCFC2-202ENST00000409857 XRN1Q8IZH2 1706 aaKnown RBP23.57■■□□□ 1.36
GCFC2-202ENST00000409857 KNDC1Q76NI1 1749 aa23.57■■□□□ 1.36
GCFC2-202ENST00000409857 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
GCFC2-202ENST00000409857 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
GCFC2-202ENST00000409857 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
GCFC2-202ENST00000409857 PTPRUQ92729 1446 aa23.53■■□□□ 1.36
GCFC2-202ENST00000409857 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
GCFC2-202ENST00000409857 KCNA6P17658 529 aa23.52■■□□□ 1.36
GCFC2-202ENST00000409857 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
GCFC2-202ENST00000409857 YTHDC2Q9H6S0 1430 aaKnown RBP23.52■■□□□ 1.36
GCFC2-202ENST00000409857 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
GCFC2-202ENST00000409857 TECPR2O15040 1411 aa23.51■■□□□ 1.35
GCFC2-202ENST00000409857 TSHZ2Q9NRE2 1034 aa23.51■■□□□ 1.35
GCFC2-202ENST00000409857 CPS1P31327 1500 aa23.5■■□□□ 1.35
GCFC2-202ENST00000409857 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
GCFC2-202ENST00000409857 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
GCFC2-202ENST00000409857 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
GCFC2-202ENST00000409857 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
GCFC2-202ENST00000409857 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
GCFC2-202ENST00000409857 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
GCFC2-202ENST00000409857 PTCH1Q13635 1447 aa23.48■■□□□ 1.35
GCFC2-202ENST00000409857 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
GCFC2-202ENST00000409857 LTBP4Q8N2S1 1624 aa23.47■■□□□ 1.35
GCFC2-202ENST00000409857 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
GCFC2-202ENST00000409857 ARHGEF28Q8N1W1 1705 aaKnown RBP23.46■■□□□ 1.35
GCFC2-202ENST00000409857 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
GCFC2-202ENST00000409857 FAM135BQ49AJ0 1406 aa23.43■■□□□ 1.34
GCFC2-202ENST00000409857 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
GCFC2-202ENST00000409857 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
GCFC2-202ENST00000409857 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
GCFC2-202ENST00000409857 STK26Q9P289 416 aa23.39■■□□□ 1.34
GCFC2-202ENST00000409857 NCOA3Q9Y6Q9 1424 aa23.39■■□□□ 1.34
GCFC2-202ENST00000409857 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
GCFC2-202ENST00000409857 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
GCFC2-202ENST00000409857 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms