RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NEURL4Q96JN8 1562 aa19.82■□□□□ 0.76
LIMS2-206ENST00000409754 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
LIMS2-206ENST00000409754 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
LIMS2-206ENST00000409754 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
LIMS2-206ENST00000409754 POLR1AO95602 1720 aaPredicted RBP19.81■□□□□ 0.76
LIMS2-206ENST00000409754 SLIT1O75093 1534 aa19.8■□□□□ 0.76
LIMS2-206ENST00000409754 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
LIMS2-206ENST00000409754 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
LIMS2-206ENST00000409754 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
LIMS2-206ENST00000409754 PRAG1Q86YV5 1406 aa19.78■□□□□ 0.76
LIMS2-206ENST00000409754 KIF1BO60333 1816 aa19.77■□□□□ 0.75
LIMS2-206ENST00000409754 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
LIMS2-206ENST00000409754 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
LIMS2-206ENST00000409754 USP47Q96K76 1375 aa19.75■□□□□ 0.75
LIMS2-206ENST00000409754 TMEM2Q9UHN6 1383 aa19.74■□□□□ 0.75
LIMS2-206ENST00000409754 WASHC2AQ641Q2 1341 aa19.73■□□□□ 0.75
LIMS2-206ENST00000409754 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
LIMS2-206ENST00000409754 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
LIMS2-206ENST00000409754 STAC3Q96MF2 364 aa19.72■□□□□ 0.75
LIMS2-206ENST00000409754 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
LIMS2-206ENST00000409754 LTKP29376 864 aa19.71■□□□□ 0.75
LIMS2-206ENST00000409754 CARD11Q9BXL7 1154 aa19.71■□□□□ 0.75
LIMS2-206ENST00000409754 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
LIMS2-206ENST00000409754 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
LIMS2-206ENST00000409754 MED14O60244 1454 aa19.7■□□□□ 0.74
LIMS2-206ENST00000409754 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
LIMS2-206ENST00000409754 CCDC7Q96M83 1385 aa19.69■□□□□ 0.74
LIMS2-206ENST00000409754 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
LIMS2-206ENST00000409754 GPRASP1Q5JY77 1395 aa19.69■□□□□ 0.74
LIMS2-206ENST00000409754 IQGAP1P46940 1657 aa19.69■□□□□ 0.74
LIMS2-206ENST00000409754 PPLO60437 1756 aa19.68■□□□□ 0.74
LIMS2-206ENST00000409754 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
LIMS2-206ENST00000409754 LAMC1P11047 1609 aa19.68■□□□□ 0.74
LIMS2-206ENST00000409754 NRXN3Q9Y4C0 1643 aa19.66■□□□□ 0.74
LIMS2-206ENST00000409754 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
LIMS2-206ENST00000409754 CHGAP10645 457 aaKnown RBP19.65■□□□□ 0.74
LIMS2-206ENST00000409754 STAG3Q9UJ98 1225 aa19.64■□□□□ 0.73
LIMS2-206ENST00000409754 NPHP4O75161 1426 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-206ENST00000409754 KIF7Q2M1P5 1343 aa19.63■□□□□ 0.73
LIMS2-206ENST00000409754 ANP32CO43423 234 aa19.62■□□□□ 0.73
LIMS2-206ENST00000409754 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
LIMS2-206ENST00000409754 NUTM2DQ5VT03 806 aaPredicted RBP19.61■□□□□ 0.73
LIMS2-206ENST00000409754 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
LIMS2-206ENST00000409754 MYOM2P54296 1465 aa19.6■□□□□ 0.73
LIMS2-206ENST00000409754 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
LIMS2-206ENST00000409754 NBPF1Q3BBV0 1214 aa19.6■□□□□ 0.73
LIMS2-206ENST00000409754 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
LIMS2-206ENST00000409754 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
LIMS2-206ENST00000409754 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.72
LIMS2-206ENST00000409754 PLEKHG1Q9ULL1 1385 aa19.58■□□□□ 0.72
LIMS2-206ENST00000409754 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.72
LIMS2-206ENST00000409754 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.72
LIMS2-206ENST00000409754 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
LIMS2-206ENST00000409754 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
LIMS2-206ENST00000409754 LTBP4Q8N2S1 1624 aa19.55■□□□□ 0.72
LIMS2-206ENST00000409754 KIAA1210Q9ULL0 1709 aa19.55■□□□□ 0.72
LIMS2-206ENST00000409754 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
LIMS2-206ENST00000409754 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
LIMS2-206ENST00000409754 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
LIMS2-206ENST00000409754 RPGRIP1LQ68CZ1 1315 aa19.52■□□□□ 0.72
LIMS2-206ENST00000409754 ADGRF5Q8IZF2 1346 aa19.52■□□□□ 0.71
LIMS2-206ENST00000409754 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
LIMS2-206ENST00000409754 ASXL1Q8IXJ9 1541 aa19.5■□□□□ 0.71
LIMS2-206ENST00000409754 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
LIMS2-206ENST00000409754 SLC26A8Q96RN1 970 aa19.5■□□□□ 0.71
LIMS2-206ENST00000409754 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
LIMS2-206ENST00000409754 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
LIMS2-206ENST00000409754 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
LIMS2-206ENST00000409754 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
LIMS2-206ENST00000409754 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
LIMS2-206ENST00000409754 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
LIMS2-206ENST00000409754 TESK2Q96S53 571 aa19.47■□□□□ 0.71
LIMS2-206ENST00000409754 PTPRUQ92729 1446 aa19.46■□□□□ 0.71
LIMS2-206ENST00000409754 XRN1Q8IZH2 1706 aaKnown RBP19.46■□□□□ 0.71
LIMS2-206ENST00000409754 XIRP1Q702N8 1843 aaKnown RBP19.45■□□□□ 0.7
LIMS2-206ENST00000409754 METP08581 1390 aa19.45■□□□□ 0.7
LIMS2-206ENST00000409754 POLR3GLQ9BT43 218 aa19.43■□□□□ 0.7
LIMS2-206ENST00000409754 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
LIMS2-206ENST00000409754 EIF3AQ14152 1382 aaKnown RBP19.43■□□□□ 0.7
LIMS2-206ENST00000409754 VGFO15240 615 aaPredicted RBP19.42■□□□□ 0.7
LIMS2-206ENST00000409754 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
LIMS2-206ENST00000409754 TBX22Q9Y458 520 aa19.42■□□□□ 0.7
LIMS2-206ENST00000409754 PRKRIP1Q9H875 184 aaPredicted RBP19.41■□□□□ 0.7
LIMS2-206ENST00000409754 TMF1P82094 1093 aa19.4■□□□□ 0.7
LIMS2-206ENST00000409754 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
LIMS2-206ENST00000409754 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.69
LIMS2-206ENST00000409754 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
LIMS2-206ENST00000409754 DISP3Q9P2K9 1392 aa19.38■□□□□ 0.69
LIMS2-206ENST00000409754 CPS1P31327 1500 aa19.38■□□□□ 0.69
LIMS2-206ENST00000409754 PIK3R4Q99570 1358 aa19.37■□□□□ 0.69
LIMS2-206ENST00000409754 BCANQ96GW7 911 aa19.36■□□□□ 0.69
LIMS2-206ENST00000409754 NKTRP30414 1462 aaKnown RBP19.36■□□□□ 0.69
LIMS2-206ENST00000409754 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
LIMS2-206ENST00000409754 KNDC1Q76NI1 1749 aa19.35■□□□□ 0.69
LIMS2-206ENST00000409754 KCNA6P17658 529 aa19.34■□□□□ 0.69
LIMS2-206ENST00000409754 CDCA8Q53HL2 280 aa19.33■□□□□ 0.68
LIMS2-206ENST00000409754 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
LIMS2-206ENST00000409754 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
LIMS2-206ENST00000409754 TECPR2O15040 1411 aa19.3■□□□□ 0.68
LIMS2-206ENST00000409754 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms