RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NLRP2Q9NX02 1062 aa10.35□□□□□ -0.75
SCN9A-203ENST00000409672 SYAP1Q96A49 352 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-203ENST00000409672 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-203ENST00000409672 ERICH2A1L162 156 aa10.34□□□□□ -0.75
SCN9A-203ENST00000409672 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
SCN9A-203ENST00000409672 TDRD9Q8NDG6 1382 aaKnown RBP10.34□□□□□ -0.75
SCN9A-203ENST00000409672 CECR2Q9BXF3 1484 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 DDX54Q8TDD1 881 aaKnown RBP10.33□□□□□ -0.76
SCN9A-203ENST00000409672 WASHC4Q2M389 1173 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 TTLL5Q6EMB2 1281 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 DIAPH3Q9NSV4 1193 aa10.33□□□□□ -0.76
SCN9A-203ENST00000409672 GOLGA6L19H0YKK7 550 aa10.32□□□□□ -0.76
SCN9A-203ENST00000409672 EPS15P42566 896 aa10.32□□□□□ -0.76
SCN9A-203ENST00000409672 CARMIL1Q5VZK9 1371 aa10.32□□□□□ -0.76
SCN9A-203ENST00000409672 IFIT2P09913 472 aaKnown RBP10.32□□□□□ -0.76
SCN9A-203ENST00000409672 PMFBP1Q8TBY8 1022 aa10.32□□□□□ -0.76
SCN9A-203ENST00000409672 RRP12Q5JTH9 1297 aaKnown RBP10.32□□□□□ -0.76
SCN9A-203ENST00000409672 SPINK5Q9NQ38 1064 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-203ENST00000409672 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
SCN9A-203ENST00000409672 CPLX1O14810 134 aa10.31□□□□□ -0.76
SCN9A-203ENST00000409672 TRDNQ13061 729 aa10.31□□□□□ -0.76
SCN9A-203ENST00000409672 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
SCN9A-203ENST00000409672 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
SCN9A-203ENST00000409672 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
SCN9A-203ENST00000409672 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-203ENST00000409672 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-203ENST00000409672 DHX37Q8IY37 1157 aaKnown RBP10.3□□□□□ -0.76
SCN9A-203ENST00000409672 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 HSP90AB2PQ58FF8 381 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 DEKP35659 375 aaKnown RBP10.3□□□□□ -0.76
SCN9A-203ENST00000409672 ST18O60284 1047 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 BECN2A8MW95 431 aa10.3□□□□□ -0.76
SCN9A-203ENST00000409672 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-203ENST00000409672 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
SCN9A-203ENST00000409672 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
SCN9A-203ENST00000409672 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-203ENST00000409672 ATP2B1P20020 1258 aa10.29□□□□□ -0.76
SCN9A-203ENST00000409672 WWC3Q9ULE0 1092 aa10.29□□□□□ -0.76
SCN9A-203ENST00000409672 MYO15BQ96JP2 1530 aa10.29□□□□□ -0.76
SCN9A-203ENST00000409672 XPCQ01831 940 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-203ENST00000409672 TPM1P09493 284 aa10.28□□□□□ -0.76
SCN9A-203ENST00000409672 G3BP1Q13283 466 aaKnown RBP eCLIP10.27□□□□□ -0.76
SCN9A-203ENST00000409672 ZSCAN29Q8IWY8 852 aaPredicted RBP10.27□□□□□ -0.76
SCN9A-203ENST00000409672 PANK3Q9H999 370 aa10.27□□□□□ -0.76
SCN9A-203ENST00000409672 FAM161AQ3B820 660 aa10.27□□□□□ -0.76
SCN9A-203ENST00000409672 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.76
SCN9A-203ENST00000409672 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
SCN9A-203ENST00000409672 PTMSP20962 102 aa10.27□□□□□ -0.77
SCN9A-203ENST00000409672 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■■□□ 16.2
SCN9A-203ENST00000409672 EEA1Q15075 1411 aa10.27□□□□□ -0.77
SCN9A-203ENST00000409672 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
SCN9A-203ENST00000409672 ABTB2Q8N961 1025 aa10.26□□□□□ -0.77
SCN9A-203ENST00000409672 ZHX3Q9H4I2 956 aa10.26□□□□□ -0.77
SCN9A-203ENST00000409672 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
SCN9A-203ENST00000409672 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-203ENST00000409672 KIF6Q6ZMV9 814 aa10.26□□□□□ -0.77
SCN9A-203ENST00000409672 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
SCN9A-203ENST00000409672 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-203ENST00000409672 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
SCN9A-203ENST00000409672 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
SCN9A-203ENST00000409672 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
SCN9A-203ENST00000409672 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
SCN9A-203ENST00000409672 SOGA1O94964 1423 aa10.25□□□□□ -0.77
SCN9A-203ENST00000409672 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
SCN9A-203ENST00000409672 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-203ENST00000409672 MYL6BP14649 208 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 CA8P35219 290 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
SCN9A-203ENST00000409672 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 MPHOSPH10O00566 681 aaKnown RBP10.24□□□□□ -0.77
SCN9A-203ENST00000409672 TTC16Q8NEE8 873 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 AK7Q96M32 723 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-203ENST00000409672 RIPK4P57078 832 aa10.24□□□□□ -0.77
SCN9A-203ENST00000409672 GOLGA6L3A6NEY3 463 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 CNNM1Q9NRU3 951 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
SCN9A-203ENST00000409672 TOM1L2Q6ZVM7 507 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-203ENST00000409672 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 ANKRD30AQ9BXX3 1397 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 PDILTQ8N807 584 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 HOMER1Q86YM7 354 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCN9A-203ENST00000409672 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
SCN9A-203ENST00000409672 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
SCN9A-203ENST00000409672 PROSER2Q86WR7 435 aaPredicted RBP10.22□□□□□ -0.77
SCN9A-203ENST00000409672 PHF14O94880 888 aa10.22□□□□□ -0.77
SCN9A-203ENST00000409672 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
SCN9A-203ENST00000409672 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
SCN9A-203ENST00000409672 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
SCN9A-203ENST00000409672 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms