RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 SLIT1O75093 1534 aa24■■□□□ 1.43
IMP4-202ENST00000409649 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
IMP4-202ENST00000409649 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
IMP4-202ENST00000409649 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
IMP4-202ENST00000409649 RIMS2Q9UQ26 1411 aa23.98■■□□□ 1.43
IMP4-202ENST00000409649 ZFYVE9O95405 1425 aa23.96■■□□□ 1.43
IMP4-202ENST00000409649 PPP1R15AO75807 674 aaPredicted RBP23.96■■□□□ 1.43
IMP4-202ENST00000409649 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.42
IMP4-202ENST00000409649 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
IMP4-202ENST00000409649 L3MBTL2Q969R5 705 aa23.95■■□□□ 1.42
IMP4-202ENST00000409649 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
IMP4-202ENST00000409649 MYOM2P54296 1465 aa23.93■■□□□ 1.42
IMP4-202ENST00000409649 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
IMP4-202ENST00000409649 MYO5BQ9ULV0 1848 aa23.91■■□□□ 1.42
IMP4-202ENST00000409649 ZEB1P37275 1124 aaPredicted RBP23.89■■□□□ 1.41
IMP4-202ENST00000409649 HSPA2P54652 639 aa23.89■■□□□ 1.41
IMP4-202ENST00000409649 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
IMP4-202ENST00000409649 PPLO60437 1756 aa23.88■■□□□ 1.41
IMP4-202ENST00000409649 LTKP29376 864 aa23.87■■□□□ 1.41
IMP4-202ENST00000409649 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
IMP4-202ENST00000409649 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
IMP4-202ENST00000409649 MED14O60244 1454 aa23.85■■□□□ 1.41
IMP4-202ENST00000409649 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
IMP4-202ENST00000409649 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
IMP4-202ENST00000409649 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
IMP4-202ENST00000409649 BCANQ96GW7 911 aa23.83■■□□□ 1.41
IMP4-202ENST00000409649 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
IMP4-202ENST00000409649 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
IMP4-202ENST00000409649 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
IMP4-202ENST00000409649 NCKAP5LQ9HCH0 1330 aa23.82■■□□□ 1.4
IMP4-202ENST00000409649 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
IMP4-202ENST00000409649 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
IMP4-202ENST00000409649 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
IMP4-202ENST00000409649 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
IMP4-202ENST00000409649 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
IMP4-202ENST00000409649 DIP2AQ14689 1571 aa23.76■■□□□ 1.39
IMP4-202ENST00000409649 LAMC1P11047 1609 aa23.74■■□□□ 1.39
IMP4-202ENST00000409649 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
IMP4-202ENST00000409649 PIK3R4Q99570 1358 aa23.72■■□□□ 1.39
IMP4-202ENST00000409649 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
IMP4-202ENST00000409649 STRCQ7RTU9 1775 aa23.71■■□□□ 1.39
IMP4-202ENST00000409649 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.39
IMP4-202ENST00000409649 ALKQ9UM73 1620 aa23.7■■□□□ 1.39
IMP4-202ENST00000409649 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
IMP4-202ENST00000409649 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
IMP4-202ENST00000409649 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
IMP4-202ENST00000409649 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
IMP4-202ENST00000409649 RALGAPBQ86X10 1494 aa23.68■■□□□ 1.38
IMP4-202ENST00000409649 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
IMP4-202ENST00000409649 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
IMP4-202ENST00000409649 GPRASP1Q5JY77 1395 aa23.64■■□□□ 1.37
IMP4-202ENST00000409649 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
IMP4-202ENST00000409649 METP08581 1390 aa23.62■■□□□ 1.37
IMP4-202ENST00000409649 KCNA6P17658 529 aa23.6■■□□□ 1.37
IMP4-202ENST00000409649 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
IMP4-202ENST00000409649 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
IMP4-202ENST00000409649 LRPPRCP42704 1394 aaKnown RBP23.6■■□□□ 1.37
IMP4-202ENST00000409649 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
IMP4-202ENST00000409649 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
IMP4-202ENST00000409649 TMEM132EQ6IEE7 984 aa23.59■■□□□ 1.37
IMP4-202ENST00000409649 ABCC11Q96J66 1382 aa23.59■■□□□ 1.37
IMP4-202ENST00000409649 YTHDC2Q9H6S0 1430 aaKnown RBP23.59■■□□□ 1.37
IMP4-202ENST00000409649 AMOTL2Q9Y2J4 779 aa23.57■■□□□ 1.36
IMP4-202ENST00000409649 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
IMP4-202ENST00000409649 SIRT1Q96EB6 747 aa23.56■■□□□ 1.36
IMP4-202ENST00000409649 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
IMP4-202ENST00000409649 TECPR2O15040 1411 aa23.55■■□□□ 1.36
IMP4-202ENST00000409649 NKTRP30414 1462 aaKnown RBP23.53■■□□□ 1.36
IMP4-202ENST00000409649 NWD1Q149M9 1564 aa23.52■■□□□ 1.36
IMP4-202ENST00000409649 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
IMP4-202ENST00000409649 STK26Q9P289 416 aa23.52■■□□□ 1.36
IMP4-202ENST00000409649 DLC1Q96QB1 1528 aa23.52■■□□□ 1.36
IMP4-202ENST00000409649 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
IMP4-202ENST00000409649 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
IMP4-202ENST00000409649 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
IMP4-202ENST00000409649 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
IMP4-202ENST00000409649 SLC24A1O60721 1099 aa23.49■■□□□ 1.35
IMP4-202ENST00000409649 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
IMP4-202ENST00000409649 KNDC1Q76NI1 1749 aa23.48■■□□□ 1.35
IMP4-202ENST00000409649 CPS1P31327 1500 aa23.48■■□□□ 1.35
IMP4-202ENST00000409649 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
IMP4-202ENST00000409649 POGKQ9P215 609 aa23.47■■□□□ 1.35
IMP4-202ENST00000409649 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
IMP4-202ENST00000409649 USP47Q96K76 1375 aa23.46■■□□□ 1.35
IMP4-202ENST00000409649 NCOA3Q9Y6Q9 1424 aa23.45■■□□□ 1.34
IMP4-202ENST00000409649 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
IMP4-202ENST00000409649 ROBO2Q9HCK4 1378 aa23.44■■□□□ 1.34
IMP4-202ENST00000409649 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
IMP4-202ENST00000409649 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
IMP4-202ENST00000409649 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
IMP4-202ENST00000409649 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
IMP4-202ENST00000409649 WAPLQ7Z5K2 1190 aa23.38■■□□□ 1.33
IMP4-202ENST00000409649 ST20-MTHFSA0A0A6YYL1 179 aa23.37■■□□□ 1.33
IMP4-202ENST00000409649 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
IMP4-202ENST00000409649 C14orf37Q86TY3 774 aa23.36■■□□□ 1.33
IMP4-202ENST00000409649 LRRC7Q96NW7 1537 aa23.35■■□□□ 1.33
IMP4-202ENST00000409649 LTBP4Q8N2S1 1624 aa23.35■■□□□ 1.33
IMP4-202ENST00000409649 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
IMP4-202ENST00000409649 HSPA5P11021 654 aaKnown RBP23.34■■□□□ 1.33
IMP4-202ENST00000409649 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms