RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
SUMO1-208ENST00000409627 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
SUMO1-208ENST00000409627 STRCQ7RTU9 1775 aa24.13■■□□□ 1.45
SUMO1-208ENST00000409627 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
SUMO1-208ENST00000409627 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
SUMO1-208ENST00000409627 RGL3Q3MIN7 710 aa24.11■■□□□ 1.45
SUMO1-208ENST00000409627 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
SUMO1-208ENST00000409627 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.09■■□□□ 1.45
SUMO1-208ENST00000409627 ANKLE2Q86XL3 938 aa24.08■■□□□ 1.45
SUMO1-208ENST00000409627 EID1Q9Y6B2 187 aa24.08■■□□□ 1.45
SUMO1-208ENST00000409627 MED14O60244 1454 aa24.07■■□□□ 1.44
SUMO1-208ENST00000409627 MYOM2P54296 1465 aa24.07■■□□□ 1.44
SUMO1-208ENST00000409627 TXNDC2Q86VQ3 553 aa24.07■■□□□ 1.44
SUMO1-208ENST00000409627 LTKP29376 864 aa24.06■■□□□ 1.44
SUMO1-208ENST00000409627 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
SUMO1-208ENST00000409627 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
SUMO1-208ENST00000409627 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
SUMO1-208ENST00000409627 NCKAP5LQ9HCH0 1330 aa24.03■■□□□ 1.44
SUMO1-208ENST00000409627 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
SUMO1-208ENST00000409627 NRXN1Q9ULB1 1477 aa24.02■■□□□ 1.44
SUMO1-208ENST00000409627 VGFO15240 615 aaPredicted RBP24.02■■□□□ 1.44
SUMO1-208ENST00000409627 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
SUMO1-208ENST00000409627 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
SUMO1-208ENST00000409627 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
SUMO1-208ENST00000409627 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
SUMO1-208ENST00000409627 L3MBTL2Q969R5 705 aa24.01■■□□□ 1.43
SUMO1-208ENST00000409627 NRXN3Q9Y4C0 1643 aa24.01■■□□□ 1.43
SUMO1-208ENST00000409627 DCAF11Q8TEB1 546 aa24■■□□□ 1.43
SUMO1-208ENST00000409627 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
SUMO1-208ENST00000409627 PIK3C2GO75747 1445 aa23.97■■□□□ 1.43
SUMO1-208ENST00000409627 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
SUMO1-208ENST00000409627 ADGRF5Q8IZF2 1346 aa23.97■■□□□ 1.43
SUMO1-208ENST00000409627 LAMC1P11047 1609 aa23.95■■□□□ 1.43
SUMO1-208ENST00000409627 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
SUMO1-208ENST00000409627 KDM2AQ9Y2K7 1162 aa23.94■■□□□ 1.42
SUMO1-208ENST00000409627 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
SUMO1-208ENST00000409627 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
SUMO1-208ENST00000409627 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
SUMO1-208ENST00000409627 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
SUMO1-208ENST00000409627 KIAA1210Q9ULL0 1709 aa23.92■■□□□ 1.42
SUMO1-208ENST00000409627 BCANQ96GW7 911 aa23.89■■□□□ 1.41
SUMO1-208ENST00000409627 TBX22Q9Y458 520 aa23.87■■□□□ 1.41
SUMO1-208ENST00000409627 TRPM1Q7Z4N2 1603 aa23.87■■□□□ 1.41
SUMO1-208ENST00000409627 SLC26A8Q96RN1 970 aa23.85■■□□□ 1.41
SUMO1-208ENST00000409627 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
SUMO1-208ENST00000409627 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
SUMO1-208ENST00000409627 CHD2O14647 1828 aaKnown RBP23.84■■□□□ 1.41
SUMO1-208ENST00000409627 PIK3R4Q99570 1358 aa23.83■■□□□ 1.41
SUMO1-208ENST00000409627 ASXL1Q8IXJ9 1541 aa23.83■■□□□ 1.41
SUMO1-208ENST00000409627 NWD1Q149M9 1564 aa23.82■■□□□ 1.4
SUMO1-208ENST00000409627 CFAP70Q5T0N1 1121 aa23.81■■□□□ 1.4
SUMO1-208ENST00000409627 ADGRB1O14514 1584 aa23.81■■□□□ 1.4
SUMO1-208ENST00000409627 METP08581 1390 aa23.8■■□□□ 1.4
SUMO1-208ENST00000409627 NBPF8Q3BBV2 869 aa23.8■■□□□ 1.4
SUMO1-208ENST00000409627 RALGAPBQ86X10 1494 aa23.79■■□□□ 1.4
SUMO1-208ENST00000409627 XRN1Q8IZH2 1706 aaKnown RBP23.79■■□□□ 1.4
SUMO1-208ENST00000409627 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
SUMO1-208ENST00000409627 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
SUMO1-208ENST00000409627 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
SUMO1-208ENST00000409627 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
SUMO1-208ENST00000409627 KCNA6P17658 529 aa23.72■■□□□ 1.39
SUMO1-208ENST00000409627 TMEM132EQ6IEE7 984 aa23.72■■□□□ 1.39
SUMO1-208ENST00000409627 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
SUMO1-208ENST00000409627 GPRASP1Q5JY77 1395 aa23.72■■□□□ 1.39
SUMO1-208ENST00000409627 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
SUMO1-208ENST00000409627 CPS1P31327 1500 aa23.71■■□□□ 1.39
SUMO1-208ENST00000409627 ROCK2O75116 1388 aaKnown RBP23.71■■□□□ 1.39
SUMO1-208ENST00000409627 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
SUMO1-208ENST00000409627 NBPF1Q3BBV0 1214 aa23.71■■□□□ 1.39
SUMO1-208ENST00000409627 TECPR2O15040 1411 aa23.7■■□□□ 1.38
SUMO1-208ENST00000409627 LTBP4Q8N2S1 1624 aa23.69■■□□□ 1.38
SUMO1-208ENST00000409627 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
SUMO1-208ENST00000409627 PTCH1Q13635 1447 aa23.68■■□□□ 1.38
SUMO1-208ENST00000409627 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
SUMO1-208ENST00000409627 ARHGEF28Q8N1W1 1705 aaKnown RBP23.68■■□□□ 1.38
SUMO1-208ENST00000409627 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
SUMO1-208ENST00000409627 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
SUMO1-208ENST00000409627 STK26Q9P289 416 aa23.63■■□□□ 1.37
SUMO1-208ENST00000409627 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
SUMO1-208ENST00000409627 XIRP1Q702N8 1843 aaKnown RBP23.62■■□□□ 1.37
SUMO1-208ENST00000409627 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
SUMO1-208ENST00000409627 ROBO2Q9HCK4 1378 aa23.62■■□□□ 1.37
SUMO1-208ENST00000409627 LRRC7Q96NW7 1537 aa23.61■■□□□ 1.37
SUMO1-208ENST00000409627 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
SUMO1-208ENST00000409627 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
SUMO1-208ENST00000409627 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
SUMO1-208ENST00000409627 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
SUMO1-208ENST00000409627 NCOA3Q9Y6Q9 1424 aa23.57■■□□□ 1.36
SUMO1-208ENST00000409627 QRICH2Q9H0J4 1663 aa23.55■■□□□ 1.36
SUMO1-208ENST00000409627 NALCNQ8IZF0 1738 aa23.55■■□□□ 1.36
SUMO1-208ENST00000409627 TMEM94Q12767 1356 aa23.54■■□□□ 1.36
SUMO1-208ENST00000409627 PLEKHH1Q9ULM0 1364 aa23.53■■□□□ 1.36
SUMO1-208ENST00000409627 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
SUMO1-208ENST00000409627 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
SUMO1-208ENST00000409627 USP47Q96K76 1375 aa23.52■■□□□ 1.36
SUMO1-208ENST00000409627 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.36
SUMO1-208ENST00000409627 IQSEC2Q5JU85 1478 aa23.51■■□□□ 1.35
SUMO1-208ENST00000409627 POGKQ9P215 609 aa23.51■■□□□ 1.35
SUMO1-208ENST00000409627 ADGRB2O60241 1585 aa23.51■■□□□ 1.35
SUMO1-208ENST00000409627 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms