RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 ZNF326Q5BKZ1 582 aaKnown RBP28.03■■■□□ 2.08
PGAP1-204ENST00000409475 PTPRMP28827 1452 aa28.03■■■□□ 2.08
PGAP1-204ENST00000409475 ZFYVE9O95405 1425 aa28■■■□□ 2.07
PGAP1-204ENST00000409475 KIAA1210Q9ULL0 1709 aa28■■■□□ 2.07
PGAP1-204ENST00000409475 STAG3Q9UJ98 1225 aa27.99■■■□□ 2.07
PGAP1-204ENST00000409475 ZNF142P52746 1687 aaPredicted RBP27.96■■■□□ 2.07
PGAP1-204ENST00000409475 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
PGAP1-204ENST00000409475 LAMC1P11047 1609 aa27.95■■■□□ 2.07
PGAP1-204ENST00000409475 VGFO15240 615 aaPredicted RBP27.93■■■□□ 2.06
PGAP1-204ENST00000409475 CEP170BQ9Y4F5 1589 aaPredicted RBP27.93■■■□□ 2.06
PGAP1-204ENST00000409475 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
PGAP1-204ENST00000409475 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
PGAP1-204ENST00000409475 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
PGAP1-204ENST00000409475 GPRASP1Q5JY77 1395 aa27.92■■■□□ 2.06
PGAP1-204ENST00000409475 RIMS2Q9UQ26 1411 aa27.92■■■□□ 2.06
PGAP1-204ENST00000409475 SLIT1O75093 1534 aa27.88■■■□□ 2.05
PGAP1-204ENST00000409475 TMEM2Q9UHN6 1383 aa27.88■■■□□ 2.05
PGAP1-204ENST00000409475 ROCK2O75116 1388 aaKnown RBP27.87■■■□□ 2.05
PGAP1-204ENST00000409475 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.87■■■□□ 2.05
PGAP1-204ENST00000409475 ARHGAP23Q9P227 1491 aa27.86■■■□□ 2.05
PGAP1-204ENST00000409475 HDGFP51858 240 aaKnown RBP27.86■■■□□ 2.05
PGAP1-204ENST00000409475 SETBP1Q9Y6X0 1596 aa27.85■■■□□ 2.05
PGAP1-204ENST00000409475 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
PGAP1-204ENST00000409475 ZNF316A6NFI3 1004 aaPredicted RBP27.84■■■□□ 2.05
PGAP1-204ENST00000409475 THEMISQ8N1K5 641 aaPredicted RBP27.83■■■□□ 2.05
PGAP1-204ENST00000409475 EIF4G2P78344 907 aaKnown RBP eCLIP27.81■■■□□ 2.04
PGAP1-204ENST00000409475 CARD11Q9BXL7 1154 aa27.81■■■□□ 2.04
PGAP1-204ENST00000409475 C14orf93Q9H972 538 aaKnown RBP27.81■■■□□ 2.04
PGAP1-204ENST00000409475 NBPF1Q3BBV0 1214 aa27.8■■■□□ 2.04
PGAP1-204ENST00000409475 IQGAP1P46940 1657 aa27.79■■■□□ 2.04
PGAP1-204ENST00000409475 NUTM2DQ5VT03 806 aaPredicted RBP27.78■■■□□ 2.04
PGAP1-204ENST00000409475 USP47Q96K76 1375 aa27.77■■■□□ 2.04
PGAP1-204ENST00000409475 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
PGAP1-204ENST00000409475 ADGRB1O14514 1584 aa27.76■■■□□ 2.03
PGAP1-204ENST00000409475 HSPA5P11021 654 aaKnown RBP27.76■■■□□ 2.03
PGAP1-204ENST00000409475 NRXN3Q9Y4C0 1643 aa27.75■■■□□ 2.03
PGAP1-204ENST00000409475 ALKQ9UM73 1620 aa27.74■■■□□ 2.03
PGAP1-204ENST00000409475 SETD1AO15047 1707 aaKnown RBP27.74■■■□□ 2.03
PGAP1-204ENST00000409475 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
PGAP1-204ENST00000409475 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
PGAP1-204ENST00000409475 EID1Q9Y6B2 187 aa27.72■■■□□ 2.03
PGAP1-204ENST00000409475 ASXL1Q8IXJ9 1541 aa27.69■■■□□ 2.02
PGAP1-204ENST00000409475 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
PGAP1-204ENST00000409475 LTKP29376 864 aa27.68■■■□□ 2.02
PGAP1-204ENST00000409475 DIP2AQ14689 1571 aa27.64■■■□□ 2.02
PGAP1-204ENST00000409475 EIF3AQ14152 1382 aaKnown RBP27.64■■■□□ 2.02
PGAP1-204ENST00000409475 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
PGAP1-204ENST00000409475 ADAMTS13Q76LX8 1427 aa27.62■■■□□ 2.01
PGAP1-204ENST00000409475 MED14O60244 1454 aa27.62■■■□□ 2.01
PGAP1-204ENST00000409475 HIRIP3Q9BW71 556 aaPredicted RBP27.62■■■□□ 2.01
PGAP1-204ENST00000409475 ANKLE2Q86XL3 938 aa27.6■■■□□ 2.01
PGAP1-204ENST00000409475 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
PGAP1-204ENST00000409475 ARHGEF28Q8N1W1 1705 aaKnown RBP27.59■■■□□ 2.01
PGAP1-204ENST00000409475 TMEM132EQ6IEE7 984 aa27.58■■■□□ 2.01
PGAP1-204ENST00000409475 YTHDC2Q9H6S0 1430 aaKnown RBP27.58■■■□□ 2.01
PGAP1-204ENST00000409475 KNDC1Q76NI1 1749 aa27.56■■■□□ 2
PGAP1-204ENST00000409475 DLC1Q96QB1 1528 aa27.55■■■□□ 2
PGAP1-204ENST00000409475 LRPPRCP42704 1394 aaKnown RBP27.55■■■□□ 2
PGAP1-204ENST00000409475 LMTK3Q96Q04 1460 aa27.54■■■□□ 2
PGAP1-204ENST00000409475 BCANQ96GW7 911 aa27.53■■■□□ 2
PGAP1-204ENST00000409475 TBX22Q9Y458 520 aa27.53■■■□□ 2
PGAP1-204ENST00000409475 METP08581 1390 aa27.53■■■□□ 2
PGAP1-204ENST00000409475 TESK2Q96S53 571 aa27.51■■■□□ 2
PGAP1-204ENST00000409475 SENP3Q9H4L4 574 aaPredicted RBP27.51■■■□□ 2
PGAP1-204ENST00000409475 SBNO2Q9Y2G9 1366 aa27.51■■□□□ 1.99
PGAP1-204ENST00000409475 ABCC11Q96J66 1382 aa27.51■■□□□ 1.99
PGAP1-204ENST00000409475 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
PGAP1-204ENST00000409475 QRICH2Q9H0J4 1663 aa27.5■■□□□ 1.99
PGAP1-204ENST00000409475 TECPR2O15040 1411 aa27.5■■□□□ 1.99
PGAP1-204ENST00000409475 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
PGAP1-204ENST00000409475 SLC24A1O60721 1099 aa27.49■■□□□ 1.99
PGAP1-204ENST00000409475 CPS1P31327 1500 aa27.48■■□□□ 1.99
PGAP1-204ENST00000409475 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
PGAP1-204ENST00000409475 PIK3R4Q99570 1358 aa27.48■■□□□ 1.99
PGAP1-204ENST00000409475 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
PGAP1-204ENST00000409475 WASHC2AQ641Q2 1341 aa27.47■■□□□ 1.99
PGAP1-204ENST00000409475 C11orf95C9JLR9 678 aaPredicted RBP27.46■■□□□ 1.99
PGAP1-204ENST00000409475 SIRT1Q96EB6 747 aa27.45■■□□□ 1.98
PGAP1-204ENST00000409475 SLC26A8Q96RN1 970 aa27.45■■□□□ 1.98
PGAP1-204ENST00000409475 STK26Q9P289 416 aa27.43■■□□□ 1.98
PGAP1-204ENST00000409475 KIF7Q2M1P5 1343 aa27.43■■□□□ 1.98
PGAP1-204ENST00000409475 FAM135BQ49AJ0 1406 aa27.43■■□□□ 1.98
PGAP1-204ENST00000409475 TMF1P82094 1093 aa27.42■■□□□ 1.98
PGAP1-204ENST00000409475 NCKAP5LQ9HCH0 1330 aa27.42■■□□□ 1.98
PGAP1-204ENST00000409475 XRN1Q8IZH2 1706 aaKnown RBP27.42■■□□□ 1.98
PGAP1-204ENST00000409475 PTPRUQ92729 1446 aa27.41■■□□□ 1.98
PGAP1-204ENST00000409475 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.98
PGAP1-204ENST00000409475 DISP3Q9P2K9 1392 aa27.39■■□□□ 1.98
PGAP1-204ENST00000409475 PTCH1Q13635 1447 aa27.37■■□□□ 1.97
PGAP1-204ENST00000409475 STRCQ7RTU9 1775 aa27.36■■□□□ 1.97
PGAP1-204ENST00000409475 PRAM1Q96QH2 718 aa27.36■■□□□ 1.97
PGAP1-204ENST00000409475 HSPA2P54652 639 aa27.36■■□□□ 1.97
PGAP1-204ENST00000409475 CDCA8Q53HL2 280 aa27.36■■□□□ 1.97
PGAP1-204ENST00000409475 POGKQ9P215 609 aa27.35■■□□□ 1.97
PGAP1-204ENST00000409475 DIEXFQ68CQ4 756 aaKnown RBP27.34■■□□□ 1.97
PGAP1-204ENST00000409475 NWD1Q149M9 1564 aa27.33■■□□□ 1.96
PGAP1-204ENST00000409475 AMOTL2Q9Y2J4 779 aa27.32■■□□□ 1.96
PGAP1-204ENST00000409475 ROBO2Q9HCK4 1378 aa27.32■■□□□ 1.96
PGAP1-204ENST00000409475 TULP4Q9NRJ4 1543 aa27.31■■□□□ 1.96
PGAP1-204ENST00000409475 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms