RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 PPLO60437 1756 aa21.89■■□□□ 1.1
AP1S3-204ENST00000409375 IFT172Q9UG01 1749 aa21.89■■□□□ 1.1
AP1S3-204ENST00000409375 VGFO15240 615 aaPredicted RBP21.89■■□□□ 1.09
AP1S3-204ENST00000409375 MYOM2P54296 1465 aa21.89■■□□□ 1.09
AP1S3-204ENST00000409375 NEXMIFQ5QGS0 1516 aa21.88■■□□□ 1.09
AP1S3-204ENST00000409375 RIMS2Q9UQ26 1411 aa21.88■■□□□ 1.09
AP1S3-204ENST00000409375 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
AP1S3-204ENST00000409375 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
AP1S3-204ENST00000409375 SLIT1O75093 1534 aa21.86■■□□□ 1.09
AP1S3-204ENST00000409375 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
AP1S3-204ENST00000409375 ZFYVE9O95405 1425 aa21.86■■□□□ 1.09
AP1S3-204ENST00000409375 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
AP1S3-204ENST00000409375 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
AP1S3-204ENST00000409375 ANKLE2Q86XL3 938 aa21.8■■□□□ 1.08
AP1S3-204ENST00000409375 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
AP1S3-204ENST00000409375 NRXN1Q9ULB1 1477 aa21.79■■□□□ 1.08
AP1S3-204ENST00000409375 TXNDC2Q86VQ3 553 aa21.79■■□□□ 1.08
AP1S3-204ENST00000409375 LMTK3Q96Q04 1460 aa21.78■■□□□ 1.08
AP1S3-204ENST00000409375 SCAF11Q99590 1463 aaKnown RBP21.78■■□□□ 1.08
AP1S3-204ENST00000409375 LAMC1P11047 1609 aa21.77■■□□□ 1.07
AP1S3-204ENST00000409375 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
AP1S3-204ENST00000409375 NUTM2DQ5VT03 806 aaPredicted RBP21.76■■□□□ 1.07
AP1S3-204ENST00000409375 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
AP1S3-204ENST00000409375 PLEKHG1Q9ULL1 1385 aa21.75■■□□□ 1.07
AP1S3-204ENST00000409375 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
AP1S3-204ENST00000409375 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
AP1S3-204ENST00000409375 BCANQ96GW7 911 aa21.74■■□□□ 1.07
AP1S3-204ENST00000409375 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-204ENST00000409375 LTKP29376 864 aa21.72■■□□□ 1.07
AP1S3-204ENST00000409375 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
AP1S3-204ENST00000409375 RALGAPBQ86X10 1494 aa21.71■■□□□ 1.07
AP1S3-204ENST00000409375 SETBP1Q9Y6X0 1596 aa21.71■■□□□ 1.07
AP1S3-204ENST00000409375 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
AP1S3-204ENST00000409375 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
AP1S3-204ENST00000409375 DIP2AQ14689 1571 aa21.69■■□□□ 1.06
AP1S3-204ENST00000409375 HSPA2P54652 639 aa21.68■■□□□ 1.06
AP1S3-204ENST00000409375 C14orf93Q9H972 538 aaKnown RBP21.68■■□□□ 1.06
AP1S3-204ENST00000409375 MED14O60244 1454 aa21.68■■□□□ 1.06
AP1S3-204ENST00000409375 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
AP1S3-204ENST00000409375 IQGAP1P46940 1657 aa21.66■■□□□ 1.06
AP1S3-204ENST00000409375 CFAP70Q5T0N1 1121 aa21.66■■□□□ 1.06
AP1S3-204ENST00000409375 ALKQ9UM73 1620 aa21.66■■□□□ 1.06
AP1S3-204ENST00000409375 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
AP1S3-204ENST00000409375 GPRASP1Q5JY77 1395 aa21.63■■□□□ 1.05
AP1S3-204ENST00000409375 NCKAP5LQ9HCH0 1330 aa21.63■■□□□ 1.05
AP1S3-204ENST00000409375 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
AP1S3-204ENST00000409375 TBX22Q9Y458 520 aa21.62■■□□□ 1.05
AP1S3-204ENST00000409375 ADAMTS13Q76LX8 1427 aa21.61■■□□□ 1.05
AP1S3-204ENST00000409375 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
AP1S3-204ENST00000409375 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
AP1S3-204ENST00000409375 DMRT2Q9Y5R5 561 aa21.59■■□□□ 1.05
AP1S3-204ENST00000409375 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
AP1S3-204ENST00000409375 NBPF1Q3BBV0 1214 aa21.58■■□□□ 1.05
AP1S3-204ENST00000409375 SLC26A8Q96RN1 970 aa21.58■■□□□ 1.05
AP1S3-204ENST00000409375 ADGRB1O14514 1584 aa21.57■■□□□ 1.04
AP1S3-204ENST00000409375 STRCQ7RTU9 1775 aa21.57■■□□□ 1.04
AP1S3-204ENST00000409375 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
AP1S3-204ENST00000409375 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
AP1S3-204ENST00000409375 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
AP1S3-204ENST00000409375 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
AP1S3-204ENST00000409375 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
AP1S3-204ENST00000409375 METP08581 1390 aa21.53■■□□□ 1.04
AP1S3-204ENST00000409375 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
AP1S3-204ENST00000409375 USP47Q96K76 1375 aa21.52■■□□□ 1.04
AP1S3-204ENST00000409375 KNDC1Q76NI1 1749 aa21.51■■□□□ 1.03
AP1S3-204ENST00000409375 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
AP1S3-204ENST00000409375 STK26Q9P289 416 aa21.49■■□□□ 1.03
AP1S3-204ENST00000409375 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
AP1S3-204ENST00000409375 CHD2O14647 1828 aaKnown RBP21.48■■□□□ 1.03
AP1S3-204ENST00000409375 TECPR2O15040 1411 aa21.48■■□□□ 1.03
AP1S3-204ENST00000409375 TRAK1Q9UPV9 953 aa21.48■■□□□ 1.03
AP1S3-204ENST00000409375 SLC24A1O60721 1099 aa21.47■■□□□ 1.03
AP1S3-204ENST00000409375 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
AP1S3-204ENST00000409375 CPS1P31327 1500 aa21.46■■□□□ 1.03
AP1S3-204ENST00000409375 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
AP1S3-204ENST00000409375 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
AP1S3-204ENST00000409375 KCNA6P17658 529 aa21.45■■□□□ 1.02
AP1S3-204ENST00000409375 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
AP1S3-204ENST00000409375 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
AP1S3-204ENST00000409375 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
AP1S3-204ENST00000409375 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
AP1S3-204ENST00000409375 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
AP1S3-204ENST00000409375 POGKQ9P215 609 aa21.44■■□□□ 1.02
AP1S3-204ENST00000409375 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
AP1S3-204ENST00000409375 PTPRUQ92729 1446 aa21.43■■□□□ 1.02
AP1S3-204ENST00000409375 NKTRP30414 1462 aaKnown RBP21.42■■□□□ 1.02
AP1S3-204ENST00000409375 ST20-MTHFSA0A0A6YYL1 179 aa21.41■■□□□ 1.02
AP1S3-204ENST00000409375 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
AP1S3-204ENST00000409375 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
AP1S3-204ENST00000409375 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
AP1S3-204ENST00000409375 ROBO2Q9HCK4 1378 aa21.37■■□□□ 1.01
AP1S3-204ENST00000409375 TMF1P82094 1093 aa21.34■■□□□ 1.01
AP1S3-204ENST00000409375 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
AP1S3-204ENST00000409375 WAPLQ7Z5K2 1190 aa21.33■■□□□ 1.01
AP1S3-204ENST00000409375 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
AP1S3-204ENST00000409375 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
AP1S3-204ENST00000409375 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
AP1S3-204ENST00000409375 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
AP1S3-204ENST00000409375 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
AP1S3-204ENST00000409375 TESK2Q96S53 571 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms