RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
SSB-202ENST00000409333 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
SSB-202ENST00000409333 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
SSB-202ENST00000409333 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
SSB-202ENST00000409333 RPGRIP1LQ68CZ1 1315 aa24.01■■□□□ 1.43
SSB-202ENST00000409333 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
SSB-202ENST00000409333 NRXN1Q9ULB1 1477 aa24■■□□□ 1.43
SSB-202ENST00000409333 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
SSB-202ENST00000409333 STAC3Q96MF2 364 aa23.98■■□□□ 1.43
SSB-202ENST00000409333 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
SSB-202ENST00000409333 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
SSB-202ENST00000409333 ZFYVE9O95405 1425 aa23.95■■□□□ 1.43
SSB-202ENST00000409333 RIMS2Q9UQ26 1411 aa23.95■■□□□ 1.43
SSB-202ENST00000409333 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
SSB-202ENST00000409333 LAMC1P11047 1609 aa23.93■■□□□ 1.42
SSB-202ENST00000409333 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
SSB-202ENST00000409333 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
SSB-202ENST00000409333 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
SSB-202ENST00000409333 SLIT1O75093 1534 aa23.9■■□□□ 1.42
SSB-202ENST00000409333 NBPF1Q3BBV0 1214 aa23.9■■□□□ 1.42
SSB-202ENST00000409333 IQGAP1P46940 1657 aa23.89■■□□□ 1.42
SSB-202ENST00000409333 ARHGAP23Q9P227 1491 aa23.89■■□□□ 1.41
SSB-202ENST00000409333 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
SSB-202ENST00000409333 SETD1AO15047 1707 aaKnown RBP23.88■■□□□ 1.41
SSB-202ENST00000409333 GPRASP1Q5JY77 1395 aa23.87■■□□□ 1.41
SSB-202ENST00000409333 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
SSB-202ENST00000409333 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
SSB-202ENST00000409333 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
SSB-202ENST00000409333 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
SSB-202ENST00000409333 THEMISQ8N1K5 641 aaPredicted RBP23.83■■□□□ 1.41
SSB-202ENST00000409333 ALKQ9UM73 1620 aa23.83■■□□□ 1.41
SSB-202ENST00000409333 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.83■■□□□ 1.4
SSB-202ENST00000409333 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.4
SSB-202ENST00000409333 USP47Q96K76 1375 aa23.82■■□□□ 1.4
SSB-202ENST00000409333 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
SSB-202ENST00000409333 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
SSB-202ENST00000409333 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
SSB-202ENST00000409333 C14orf93Q9H972 538 aaKnown RBP23.81■■□□□ 1.4
SSB-202ENST00000409333 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
SSB-202ENST00000409333 HSPA5P11021 654 aaKnown RBP23.8■■□□□ 1.4
SSB-202ENST00000409333 EIF4G2P78344 907 aaKnown RBP eCLIP23.8■■□□□ 1.4
SSB-202ENST00000409333 LTKP29376 864 aa23.8■■□□□ 1.4
SSB-202ENST00000409333 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
SSB-202ENST00000409333 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
SSB-202ENST00000409333 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
SSB-202ENST00000409333 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
SSB-202ENST00000409333 PLEKHG1Q9ULL1 1385 aa23.75■■□□□ 1.39
SSB-202ENST00000409333 ARHGEF28Q8N1W1 1705 aaKnown RBP23.75■■□□□ 1.39
SSB-202ENST00000409333 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
SSB-202ENST00000409333 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
SSB-202ENST00000409333 LMTK3Q96Q04 1460 aa23.7■■□□□ 1.38
SSB-202ENST00000409333 BCANQ96GW7 911 aa23.69■■□□□ 1.38
SSB-202ENST00000409333 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
SSB-202ENST00000409333 MED14O60244 1454 aa23.68■■□□□ 1.38
SSB-202ENST00000409333 QRICH2Q9H0J4 1663 aa23.68■■□□□ 1.38
SSB-202ENST00000409333 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
SSB-202ENST00000409333 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
SSB-202ENST00000409333 KNDC1Q76NI1 1749 aa23.66■■□□□ 1.38
SSB-202ENST00000409333 YTHDC2Q9H6S0 1430 aaKnown RBP23.66■■□□□ 1.38
SSB-202ENST00000409333 METP08581 1390 aa23.65■■□□□ 1.38
SSB-202ENST00000409333 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
SSB-202ENST00000409333 TRAK1Q9UPV9 953 aa23.64■■□□□ 1.37
SSB-202ENST00000409333 SLC26A8Q96RN1 970 aa23.63■■□□□ 1.37
SSB-202ENST00000409333 STRCQ7RTU9 1775 aa23.61■■□□□ 1.37
SSB-202ENST00000409333 HSPA2P54652 639 aa23.6■■□□□ 1.37
SSB-202ENST00000409333 STK26Q9P289 416 aa23.6■■□□□ 1.37
SSB-202ENST00000409333 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
SSB-202ENST00000409333 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
SSB-202ENST00000409333 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
SSB-202ENST00000409333 TESK2Q96S53 571 aa23.59■■□□□ 1.37
SSB-202ENST00000409333 CHD2O14647 1828 aaKnown RBP23.59■■□□□ 1.37
SSB-202ENST00000409333 LRPPRCP42704 1394 aaKnown RBP23.59■■□□□ 1.37
SSB-202ENST00000409333 DLC1Q96QB1 1528 aa23.58■■□□□ 1.37
SSB-202ENST00000409333 CPS1P31327 1500 aa23.57■■□□□ 1.36
SSB-202ENST00000409333 XRN1Q8IZH2 1706 aaKnown RBP23.57■■□□□ 1.36
SSB-202ENST00000409333 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
SSB-202ENST00000409333 WASHC2AQ641Q2 1341 aa23.56■■□□□ 1.36
SSB-202ENST00000409333 PTPRUQ92729 1446 aa23.55■■□□□ 1.36
SSB-202ENST00000409333 CENPJQ9HC77 1338 aaPredicted RBP23.55■■□□□ 1.36
SSB-202ENST00000409333 ABCC11Q96J66 1382 aa23.55■■□□□ 1.36
SSB-202ENST00000409333 CCDC7Q96M83 1385 aa23.54■■□□□ 1.36
SSB-202ENST00000409333 TECPR2O15040 1411 aa23.54■■□□□ 1.36
SSB-202ENST00000409333 DISP3Q9P2K9 1392 aa23.53■■□□□ 1.36
SSB-202ENST00000409333 KIF7Q2M1P5 1343 aa23.53■■□□□ 1.36
SSB-202ENST00000409333 SBNO2Q9Y2G9 1366 aa23.51■■□□□ 1.35
SSB-202ENST00000409333 PRAM1Q96QH2 718 aa23.5■■□□□ 1.35
SSB-202ENST00000409333 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
SSB-202ENST00000409333 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
SSB-202ENST00000409333 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.358e-9■■■□□ 15.2
SSB-202ENST00000409333 TMF1P82094 1093 aa23.47■■□□□ 1.35
SSB-202ENST00000409333 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
SSB-202ENST00000409333 FAM135BQ49AJ0 1406 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 POGKQ9P215 609 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 AMOTL2Q9Y2J4 779 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 MYOM1P52179 1685 aa23.46■■□□□ 1.35
SSB-202ENST00000409333 DDX10Q13206 875 aaKnown RBP23.45■■□□□ 1.34
SSB-202ENST00000409333 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms