RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 REREQ9P2R6 1566 aa26.48■■□□□ 1.83
LIMS2-204ENST00000409286 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
LIMS2-204ENST00000409286 ADGRF5Q8IZF2 1346 aa26.47■■□□□ 1.83
LIMS2-204ENST00000409286 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
LIMS2-204ENST00000409286 HNRNPUQ00839 825 aaKnown RBP eCLIP26.45■■□□□ 1.82
LIMS2-204ENST00000409286 RALBP1Q15311 655 aa26.45■■□□□ 1.82
LIMS2-204ENST00000409286 SLC24A1O60721 1099 aa26.44■■□□□ 1.82
LIMS2-204ENST00000409286 CHGAP10645 457 aaKnown RBP26.44■■□□□ 1.82
LIMS2-204ENST00000409286 CDCA8Q53HL2 280 aa26.43■■□□□ 1.82
LIMS2-204ENST00000409286 CFAP70Q5T0N1 1121 aa26.42■■□□□ 1.82
LIMS2-204ENST00000409286 PPP6R1Q9UPN7 881 aa26.42■■□□□ 1.82
LIMS2-204ENST00000409286 AGLP35573 1532 aa26.4■■□□□ 1.82
LIMS2-204ENST00000409286 PIK3C2BO00750 1634 aa26.4■■□□□ 1.82
LIMS2-204ENST00000409286 PER1O15534 1290 aaPredicted RBP26.4■■□□□ 1.82
LIMS2-204ENST00000409286 FAM9BQ8IZU0 186 aa26.4■■□□□ 1.82
LIMS2-204ENST00000409286 SIGLEC1Q9BZZ2 1709 aa26.4■■□□□ 1.82
LIMS2-204ENST00000409286 CFAP65Q6ZU64 1925 aaKnown RBP26.39■■□□□ 1.82
LIMS2-204ENST00000409286 SLC52A1Q9NWF4 448 aa26.39■■□□□ 1.82
LIMS2-204ENST00000409286 SYNMO15061 1565 aa26.39■■□□□ 1.81
LIMS2-204ENST00000409286 PPLO60437 1756 aa26.37■■□□□ 1.81
LIMS2-204ENST00000409286 MYBBP1AQ9BQG0 1328 aaKnown RBP26.36■■□□□ 1.81
LIMS2-204ENST00000409286 SETBP1Q9Y6X0 1596 aa26.36■■□□□ 1.81
LIMS2-204ENST00000409286 C14orf93Q9H972 538 aaKnown RBP26.35■■□□□ 1.81
LIMS2-204ENST00000409286 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
LIMS2-204ENST00000409286 PANK3Q9H999 370 aa26.34■■□□□ 1.81
LIMS2-204ENST00000409286 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.81
LIMS2-204ENST00000409286 PARD3Q8TEW0 1356 aa26.33■■□□□ 1.81
LIMS2-204ENST00000409286 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
LIMS2-204ENST00000409286 ARHGEF40Q8TER5 1519 aa26.32■■□□□ 1.8
LIMS2-204ENST00000409286 VGFO15240 615 aaPredicted RBP26.31■■□□□ 1.8
LIMS2-204ENST00000409286 IDI1Q13907 227 aa26.31■■□□□ 1.8
LIMS2-204ENST00000409286 TMC1Q8TDI8 760 aa26.31■■□□□ 1.8
LIMS2-204ENST00000409286 SUPT16HQ9Y5B9 1047 aaKnown RBP26.31■■□□□ 1.8
LIMS2-204ENST00000409286 ZBED9Q6R2W3 1325 aa26.29■■□□□ 1.8
LIMS2-204ENST00000409286 PNISRQ8TF01 805 aaKnown RBP26.28■■□□□ 1.8
LIMS2-204ENST00000409286 PREX1Q8TCU6 1659 aa26.28■■□□□ 1.8
LIMS2-204ENST00000409286 SBNO2Q9Y2G9 1366 aa26.27■■□□□ 1.8
LIMS2-204ENST00000409286 ZFYVE9O95405 1425 aa26.27■■□□□ 1.8
LIMS2-204ENST00000409286 NEXMIFQ5QGS0 1516 aa26.26■■□□□ 1.79
LIMS2-204ENST00000409286 MYO3AQ8NEV4 1616 aa26.25■■□□□ 1.79
LIMS2-204ENST00000409286 NLRP13Q86W25 1043 aa26.25■■□□□ 1.79
LIMS2-204ENST00000409286 ADGRB1O14514 1584 aa26.23■■□□□ 1.79
LIMS2-204ENST00000409286 ERVK-7P63135 1459 aa26.22■■□□□ 1.79
LIMS2-204ENST00000409286 CENPJQ9HC77 1338 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-204ENST00000409286 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.78
LIMS2-204ENST00000409286 KNSTRNQ9Y448 316 aa26.19■■□□□ 1.78
LIMS2-204ENST00000409286 KDM5AP29375 1690 aaKnown RBP26.19■■□□□ 1.78
LIMS2-204ENST00000409286 TMEM131LA2VDJ0 1609 aa26.19■■□□□ 1.78
LIMS2-204ENST00000409286 NEFLP07196 543 aa26.19■■□□□ 1.78
LIMS2-204ENST00000409286 FBXO31Q5XUX0 539 aaPredicted RBP26.19■■□□□ 1.78
LIMS2-204ENST00000409286 CC2D1BQ5T0F9 858 aaKnown RBP26.17■■□□□ 1.78
LIMS2-204ENST00000409286 TRAK1Q9UPV9 953 aa26.15■■□□□ 1.78
LIMS2-204ENST00000409286 NPC1L1Q9UHC9 1359 aa26.14■■□□□ 1.78
LIMS2-204ENST00000409286 CLTCQ00610 1675 aaKnown RBP26.14■■□□□ 1.77
LIMS2-204ENST00000409286 FKBP8Q14318 412 aa26.13■■□□□ 1.77
LIMS2-204ENST00000409286 TMEM132EQ6IEE7 984 aa26.13■■□□□ 1.77
LIMS2-204ENST00000409286 MYOM1P52179 1685 aa26.13■■□□□ 1.77
LIMS2-204ENST00000409286 AMER1Q5JTC6 1135 aaPredicted RBP26.12■■□□□ 1.77
LIMS2-204ENST00000409286 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
LIMS2-204ENST00000409286 SPATA31D1Q6ZQQ2 1576 aa26.11■■□□□ 1.77
LIMS2-204ENST00000409286 ASXL1Q8IXJ9 1541 aa26.1■■□□□ 1.77
LIMS2-204ENST00000409286 INSRP06213 1382 aa26.09■■□□□ 1.77
LIMS2-204ENST00000409286 PUS7Q96PZ0 661 aaKnown RBP26.09■■□□□ 1.77
LIMS2-204ENST00000409286 MLECQ14165 292 aa26.09■■□□□ 1.77
LIMS2-204ENST00000409286 MYO5BQ9ULV0 1848 aa26.07■■□□□ 1.76
LIMS2-204ENST00000409286 ESF1Q9H501 851 aaKnown RBP26.06■■□□□ 1.76
LIMS2-204ENST00000409286 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
LIMS2-204ENST00000409286 QRICH2Q9H0J4 1663 aa26.06■■□□□ 1.76
LIMS2-204ENST00000409286 ZMYM3Q14202 1370 aa26.02■■□□□ 1.76
LIMS2-204ENST00000409286 SMG6Q86US8 1419 aaKnown RBP26.02■■□□□ 1.76
LIMS2-204ENST00000409286 A2ML1A8K2U0 1454 aa26.02■■□□□ 1.76
LIMS2-204ENST00000409286 PPP2R1AP30153 589 aa26.01■■□□□ 1.75
LIMS2-204ENST00000409286 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
LIMS2-204ENST00000409286 EVC2Q86UK5 1308 aa26■■□□□ 1.75
LIMS2-204ENST00000409286 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
LIMS2-204ENST00000409286 CARD14Q9BXL6 1004 aa25.98■■□□□ 1.75
LIMS2-204ENST00000409286 NUDCQ9Y266 331 aa25.96■■□□□ 1.75
LIMS2-204ENST00000409286 RIMS2Q9UQ26 1411 aa25.96■■□□□ 1.75
LIMS2-204ENST00000409286 ERICH6BQ5W0A0 696 aa25.95■■□□□ 1.74
LIMS2-204ENST00000409286 ALKQ9UM73 1620 aa25.94■■□□□ 1.74
LIMS2-204ENST00000409286 YTHDC2Q9H6S0 1430 aaKnown RBP25.94■■□□□ 1.74
LIMS2-204ENST00000409286 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
LIMS2-204ENST00000409286 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.93■■□□□ 1.74
LIMS2-204ENST00000409286 STK26Q9P289 416 aa25.92■■□□□ 1.74
LIMS2-204ENST00000409286 TULP4Q9NRJ4 1543 aa25.91■■□□□ 1.74
LIMS2-204ENST00000409286 PTPRMP28827 1452 aa25.9■■□□□ 1.74
LIMS2-204ENST00000409286 SLC12A5Q9H2X9 1139 aa25.9■■□□□ 1.74
LIMS2-204ENST00000409286 BCANQ96GW7 911 aa25.9■■□□□ 1.74
LIMS2-204ENST00000409286 TNRQ92752 1358 aa25.89■■□□□ 1.74
LIMS2-204ENST00000409286 PDE3BQ13370 1112 aa25.89■■□□□ 1.73
LIMS2-204ENST00000409286 HDGFP51858 240 aaKnown RBP25.88■■□□□ 1.73
LIMS2-204ENST00000409286 NINLQ9Y2I6 1382 aa25.87■■□□□ 1.73
LIMS2-204ENST00000409286 NSD3Q9BZ95 1437 aa25.87■■□□□ 1.73
LIMS2-204ENST00000409286 TRHP20396 242 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-204ENST00000409286 POGKQ9P215 609 aa25.86■■□□□ 1.73
LIMS2-204ENST00000409286 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
LIMS2-204ENST00000409286 WDR43Q15061 677 aaKnown RBP eCLIP25.84■■□□□ 1.73
LIMS2-204ENST00000409286 ANKRD36BQ8N2N9 1353 aa25.84■■□□□ 1.73
LIMS2-204ENST00000409286 DLC1Q96QB1 1528 aa25.84■■□□□ 1.73
LIMS2-204ENST00000409286 ADAMTS8Q9UP79 889 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms