RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 MED19A0JLT2 244 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ENO4A6NNW6 628 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BTBD11A6QL63 1104 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP9-7A8MTY7 169 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PPP1R37O75864 691 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EGFRP00533 1210 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 GPR162Q16538 588 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MEX3CQ5U5Q3 659 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-2Q701N4 177 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF513Q8N8E2 541 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SYMPKQ92797 1274 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPG7Q9UQ90 795 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SMARCA4P51532 1647 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CICQ96RK0 1608 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EP400Q96L91 3159 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PIEZO1Q92508 2521 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NCKAP5LQ9HCH0 1330 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LAMB4A4D0S4 1761 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LCHNA4D1U4 455 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KIF3CO14782 793 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 WIPF1O43516 503 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SRSF11Q05519 484 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SF3B2Q13435 895 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KCNC3Q14003 757 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP21-3Q3LHN1 58 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LCE1DQ5T752 114 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HIST2H2BCQ6DN03 193 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HIST2H2BDQ6DRA6 164 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-4Q6L8H1 288 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COL23A1Q86Y22 540 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FMNL2Q96PY5 1086 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LSM14BQ9BX40 385 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 C1QTNF1Q9BXJ1 281 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP9-3Q9BYQ3 159 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP4-3Q9BYR4 195 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MCOLN1Q9GZU1 580 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 STXBP5LQ9Y2K9 1186 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BOD1L1Q8NFC6 3051 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CFAP46Q8IYW2 2715 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RSF1Q96T23 1441 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SSPOA2VEC9 5147 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF318Q5VUA4 2279 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FASNP49327 2511 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CHD4Q14839 1912 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPTBN4Q9H254 2564 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SHANK2Q9UPX8 1470 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 USP34Q70CQ2 3546 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SLIT2O94813 1529 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ARID3CA6NKF2 412 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BHMG1C9JSJ3 638 aaPredicted RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TOMM70O94826 608 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ID4P47928 161 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NHLH1Q02575 133 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LRRC41Q15345 812 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LARP1BQ659C4 914 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-5Q701N2 237 aaPredicted RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CABLES1Q8TDN4 633 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CAMKK2Q96RR4 588 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LRFN3Q9BTN0 628 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPON1Q9HCB6 807 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MTMR10Q9NXD2 777 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COL4A3Q01955 1670 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NOTCH2Q04721 2471 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SMARCA2P51531 1590 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RPRD2Q5VT52 1461 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PIK3C2AO00443 1686 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KDM5AP29375 1690 aaKnown RBP0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CFAP43Q8NDM7 1665 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 JMJD1CQ15652 2540 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ARHGAP6O43182 974 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NTRK1P04629 796 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HSPA8P11142 646 aaKnown RBP0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ANKRD13DQ6ZTN6 518 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DEFB123Q8N688 67 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CHAMP1Q96JM3 812 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP4-4Q9BYR3 166 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 VWDEQ8N2E2 1590 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LAMA3Q16787 3333 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TENM1Q9UKZ4 2725 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CLASP1Q7Z460 1538 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PRUNE2Q8WUY3 3088 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PDZD2O15018 2839 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RB1CC1Q8TDY2 1594 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BLMP54132 1417 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MST1RQ04912 1400 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 POU3F2P20265 443 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RBM6P78332 1123 aaKnown RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DGKZQ13574 1117 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms