RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 MED1Q15648 1581 aaPredicted RBP30.75■■■□□ 2.51
ITSN2-204ENST00000407704 SOCS7O14512 581 aa30.74■■■□□ 2.51
ITSN2-204ENST00000407704 BCANQ96GW7 911 aa30.74■■■□□ 2.51
ITSN2-204ENST00000407704 KCNA6P17658 529 aa30.72■■■□□ 2.51
ITSN2-204ENST00000407704 ZFYVE9O95405 1425 aa30.72■■■□□ 2.51
ITSN2-204ENST00000407704 CHGAP10645 457 aaKnown RBP30.71■■■□□ 2.51
ITSN2-204ENST00000407704 RBM33Q96EV2 1170 aaKnown RBP30.71■■■□□ 2.51
ITSN2-204ENST00000407704 NUP155O75694 1391 aa30.7■■■□□ 2.51
ITSN2-204ENST00000407704 RIMS2Q9UQ26 1411 aa30.7■■■□□ 2.5
ITSN2-204ENST00000407704 TMEM94Q12767 1356 aa30.68■■■□□ 2.5
ITSN2-204ENST00000407704 PROSER2Q86WR7 435 aaPredicted RBP30.67■■■□□ 2.5
ITSN2-204ENST00000407704 NWD1Q149M9 1564 aa30.66■■■□□ 2.5
ITSN2-204ENST00000407704 PPP1R15AO75807 674 aaPredicted RBP30.66■■■□□ 2.5
ITSN2-204ENST00000407704 CHD2O14647 1828 aaKnown RBP30.66■■■□□ 2.5
ITSN2-204ENST00000407704 NUTM2DQ5VT03 806 aaPredicted RBP30.65■■■□□ 2.5
ITSN2-204ENST00000407704 PLEKHG1Q9ULL1 1385 aa30.64■■■□□ 2.5
ITSN2-204ENST00000407704 HDGFP51858 240 aaKnown RBP30.61■■■□□ 2.49
ITSN2-204ENST00000407704 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
ITSN2-204ENST00000407704 SPHKAPQ2M3C7 1700 aa30.58■■■□□ 2.49
ITSN2-204ENST00000407704 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
ITSN2-204ENST00000407704 ROBO1Q9Y6N7 1651 aa30.55■■■□□ 2.48
ITSN2-204ENST00000407704 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.55■■■□□ 2.48
ITSN2-204ENST00000407704 FAM135BQ49AJ0 1406 aa30.53■■■□□ 2.48
ITSN2-204ENST00000407704 TBX22Q9Y458 520 aa30.52■■■□□ 2.48
ITSN2-204ENST00000407704 ADAMTS13Q76LX8 1427 aa30.52■■■□□ 2.48
ITSN2-204ENST00000407704 PHF23Q9BUL5 403 aaPredicted RBP30.51■■■□□ 2.47
ITSN2-204ENST00000407704 MSH6P52701 1360 aa30.49■■■□□ 2.47
ITSN2-204ENST00000407704 DIP2AQ14689 1571 aa30.46■■■□□ 2.47
ITSN2-204ENST00000407704 NAIPQ13075 1403 aa30.46■■■□□ 2.47
ITSN2-204ENST00000407704 CLTCL1P53675 1640 aa30.43■■■□□ 2.46
ITSN2-204ENST00000407704 NRXN3Q9Y4C0 1643 aa30.41■■■□□ 2.46
ITSN2-204ENST00000407704 SLAIN2Q9P270 581 aa30.41■■■□□ 2.46
ITSN2-204ENST00000407704 ZNF326Q5BKZ1 582 aaKnown RBP30.4■■■□□ 2.46
ITSN2-204ENST00000407704 TRPM2O94759 1503 aa30.4■■■□□ 2.46
ITSN2-204ENST00000407704 PHLPP1O60346 1717 aa30.39■■■□□ 2.46
ITSN2-204ENST00000407704 KIF1BO60333 1816 aa30.39■■■□□ 2.46
ITSN2-204ENST00000407704 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.39■■■□□ 2.45
ITSN2-204ENST00000407704 C14orf37Q86TY3 774 aa30.38■■■□□ 2.45
ITSN2-204ENST00000407704 PTPRUQ92729 1446 aa30.38■■■□□ 2.45
ITSN2-204ENST00000407704 PIK3R4Q99570 1358 aa30.37■■■□□ 2.45
ITSN2-204ENST00000407704 AMOTL2Q9Y2J4 779 aa30.35■■■□□ 2.45
ITSN2-204ENST00000407704 SETBP1Q9Y6X0 1596 aa30.34■■■□□ 2.45
ITSN2-204ENST00000407704 NCOA3Q9Y6Q9 1424 aa30.34■■■□□ 2.45
ITSN2-204ENST00000407704 TRIM52Q96A61 297 aa30.34■■■□□ 2.45
ITSN2-204ENST00000407704 RGS17Q9UGC6 210 aaPredicted RBP30.32■■■□□ 2.44
ITSN2-204ENST00000407704 HFM1A2PYH4 1435 aa30.31■■■□□ 2.44
ITSN2-204ENST00000407704 NEXMIFQ5QGS0 1516 aa30.31■■■□□ 2.44
ITSN2-204ENST00000407704 XRN1Q8IZH2 1706 aaKnown RBP30.3■■■□□ 2.44
ITSN2-204ENST00000407704 C19orf44Q9H6X5 657 aa30.28■■■□□ 2.44
ITSN2-204ENST00000407704 METP08581 1390 aa30.27■■■□□ 2.44
ITSN2-204ENST00000407704 ATF3P18847 181 aa30.26■■■□□ 2.43
ITSN2-204ENST00000407704 CADPS2Q86UW7 1296 aa30.25■■■□□ 2.43
ITSN2-204ENST00000407704 COL16A1Q07092 1604 aaPredicted RBP30.25■■■□□ 2.43
ITSN2-204ENST00000407704 SLC4A1APQ9BWU0 796 aaKnown RBP30.22■■■□□ 2.43
ITSN2-204ENST00000407704 JCADQ9P266 1359 aa30.18■■■□□ 2.42
ITSN2-204ENST00000407704 FOXD1Q16676 465 aa30.17■■■□□ 2.42
ITSN2-204ENST00000407704 AHDC1Q5TGY3 1603 aaPredicted RBP30.16■■■□□ 2.42
ITSN2-204ENST00000407704 SETD1AO15047 1707 aaKnown RBP30.16■■■□□ 2.42
ITSN2-204ENST00000407704 PPLO60437 1756 aa30.15■■■□□ 2.42
ITSN2-204ENST00000407704 POTEAQ6S8J7 498 aa30.15■■■□□ 2.42
ITSN2-204ENST00000407704 NALCNQ8IZF0 1738 aa30.13■■■□□ 2.41
ITSN2-204ENST00000407704 BRINP3Q76B58 766 aa30.12■■■□□ 2.41
ITSN2-204ENST00000407704 DCCP43146 1447 aa30.12■■■□□ 2.41
ITSN2-204ENST00000407704 VGFO15240 615 aaPredicted RBP30.1■■■□□ 2.41
ITSN2-204ENST00000407704 MST1RQ04912 1400 aa30.09■■■□□ 2.41
ITSN2-204ENST00000407704 SHPRHQ149N8 1683 aa30.09■■■□□ 2.41
ITSN2-204ENST00000407704 LRP6O75581 1613 aa30.07■■■□□ 2.4
ITSN2-204ENST00000407704 ASXL1Q8IXJ9 1541 aa30.07■■■□□ 2.4
ITSN2-204ENST00000407704 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
ITSN2-204ENST00000407704 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
ITSN2-204ENST00000407704 NHSL1Q5SYE7 1610 aa30.04■■■□□ 2.4
ITSN2-204ENST00000407704 SPATA31A6Q5VVP1 1343 aa30.02■■■□□ 2.4
ITSN2-204ENST00000407704 MPHOSPH9Q99550 1183 aa30.01■■■□□ 2.39
ITSN2-204ENST00000407704 ROBO2Q9HCK4 1378 aa30.01■■■□□ 2.39
ITSN2-204ENST00000407704 DDX17Q92841 729 aaKnown RBP30■■■□□ 2.39
ITSN2-204ENST00000407704 MEX3CQ5U5Q3 659 aaKnown RBP29.99■■■□□ 2.39
ITSN2-204ENST00000407704 CCDC144AA2RUR9 1427 aa29.98■■■□□ 2.39
ITSN2-204ENST00000407704 PTCH1Q13635 1447 aa29.98■■■□□ 2.39
ITSN2-204ENST00000407704 RGL3Q3MIN7 710 aa29.98■■■□□ 2.39
ITSN2-204ENST00000407704 IFT172Q9UG01 1749 aa29.97■■■□□ 2.39
ITSN2-204ENST00000407704 NUTM2BA6NNL0 878 aaPredicted RBP29.95■■■□□ 2.39
ITSN2-204ENST00000407704 NUTM2EB1AL46 878 aaPredicted RBP29.95■■■□□ 2.39
ITSN2-204ENST00000407704 NUTM2AQ8IVF1 878 aaPredicted RBP29.95■■■□□ 2.39
ITSN2-204ENST00000407704 ADGRF5Q8IZF2 1346 aa29.95■■■□□ 2.38
ITSN2-204ENST00000407704 SPATA31E1Q6ZUB1 1445 aa29.93■■■□□ 2.38
ITSN2-204ENST00000407704 SETD5Q9C0A6 1442 aa29.93■■■□□ 2.38
ITSN2-204ENST00000407704 C1orf167Q5SNV9 1468 aa29.93■■■□□ 2.38
ITSN2-204ENST00000407704 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
ITSN2-204ENST00000407704 LRRC59Q96AG4 307 aaKnown RBP29.88■■■□□ 2.37
ITSN2-204ENST00000407704 ORAI2Q96SN7 254 aa29.87■■■□□ 2.37
ITSN2-204ENST00000407704 ZNF772Q68DY9 489 aaPredicted RBP29.84■■■□□ 2.37
ITSN2-204ENST00000407704 STK26Q9P289 416 aa29.84■■■□□ 2.37
ITSN2-204ENST00000407704 LAMC1P11047 1609 aa29.84■■■□□ 2.37
ITSN2-204ENST00000407704 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
ITSN2-204ENST00000407704 PNPLA6Q8IY17 1366 aa29.82■■■□□ 2.36
ITSN2-204ENST00000407704 TMEM132EQ6IEE7 984 aa29.82■■■□□ 2.36
ITSN2-204ENST00000407704 WAPLQ7Z5K2 1190 aa29.79■■■□□ 2.36
ITSN2-204ENST00000407704 KNDC1Q76NI1 1749 aa29.79■■■□□ 2.36
ITSN2-204ENST00000407704 PIK3C2GO75747 1445 aa29.79■■■□□ 2.36
ITSN2-204ENST00000407704 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms