RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
HERC3-203ENST00000407637 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 UTP14CQ5TAP6 766 aaKnown RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 HSCBQ8IWL3 235 aa16.12■□□□□ 0.17
HERC3-203ENST00000407637 MFAP1P55081 439 aaKnown RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 MTERF4Q7Z6M4 381 aaKnown RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
HERC3-203ENST00000407637 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
HERC3-203ENST00000407637 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
HERC3-203ENST00000407637 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
HERC3-203ENST00000407637 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
HERC3-203ENST00000407637 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
HERC3-203ENST00000407637 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
HERC3-203ENST00000407637 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
HERC3-203ENST00000407637 PANK3Q9H999 370 aa16.1■□□□□ 0.17
HERC3-203ENST00000407637 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
HERC3-203ENST00000407637 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
HERC3-203ENST00000407637 DDIT3P35638 169 aa16.09■□□□□ 0.17
HERC3-203ENST00000407637 TRMT2AQ8IZ69 625 aaKnown RBP16.09■□□□□ 0.17
HERC3-203ENST00000407637 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
HERC3-203ENST00000407637 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
HERC3-203ENST00000407637 ZSCAN20P17040 1043 aaPredicted RBP16.09■□□□□ 0.17
HERC3-203ENST00000407637 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.17
HERC3-203ENST00000407637 COL17A1Q9UMD9 1497 aaPredicted RBP16.08■□□□□ 0.16
HERC3-203ENST00000407637 ZMYM3Q14202 1370 aa16.08■□□□□ 0.16
HERC3-203ENST00000407637 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
HERC3-203ENST00000407637 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
HERC3-203ENST00000407637 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
HERC3-203ENST00000407637 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
HERC3-203ENST00000407637 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
HERC3-203ENST00000407637 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
HERC3-203ENST00000407637 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
HERC3-203ENST00000407637 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
HERC3-203ENST00000407637 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
HERC3-203ENST00000407637 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
HERC3-203ENST00000407637 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
HERC3-203ENST00000407637 NOL7Q9UMY1 257 aaKnown RBP16.05■□□□□ 0.16
HERC3-203ENST00000407637 PDIA4P13667 645 aaKnown RBP16.05■□□□□ 0.16
HERC3-203ENST00000407637 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
HERC3-203ENST00000407637 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
HERC3-203ENST00000407637 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
HERC3-203ENST00000407637 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
HERC3-203ENST00000407637 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
HERC3-203ENST00000407637 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
HERC3-203ENST00000407637 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
HERC3-203ENST00000407637 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
HERC3-203ENST00000407637 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
HERC3-203ENST00000407637 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
HERC3-203ENST00000407637 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
HERC3-203ENST00000407637 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
HERC3-203ENST00000407637 HS1BP3Q53T59 392 aa16.02■□□□□ 0.15
HERC3-203ENST00000407637 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.15
HERC3-203ENST00000407637 PTMSP20962 102 aa16.01■□□□□ 0.15
HERC3-203ENST00000407637 SCAPERQ9BY12 1400 aa16.01■□□□□ 0.15
HERC3-203ENST00000407637 APAF1O14727 1248 aa16.01■□□□□ 0.15
HERC3-203ENST00000407637 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
HERC3-203ENST00000407637 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
HERC3-203ENST00000407637 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
HERC3-203ENST00000407637 AK9Q5TCS8 1911 aa16■□□□□ 0.15
HERC3-203ENST00000407637 E9PSI1 815 aa16■□□□□ 0.15
HERC3-203ENST00000407637 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
HERC3-203ENST00000407637 SMC5Q8IY18 1101 aa16■□□□□ 0.15
HERC3-203ENST00000407637 CIZ1Q9ULV3 898 aaPredicted RBP16■□□□□ 0.15
HERC3-203ENST00000407637 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
HERC3-203ENST00000407637 TNNQ9UQP3 1299 aa16■□□□□ 0.15
HERC3-203ENST00000407637 CSPP1Q1MSJ5 1256 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
HERC3-203ENST00000407637 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 ZKSCAN5Q9Y2L8 839 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
HERC3-203ENST00000407637 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
HERC3-203ENST00000407637 RLBP1P12271 317 aa15.98■□□□□ 0.15
HERC3-203ENST00000407637 CBX1P83916 185 aa15.98■□□□□ 0.15
HERC3-203ENST00000407637 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
HERC3-203ENST00000407637 TESK2Q96S53 571 aa15.98■□□□□ 0.15
HERC3-203ENST00000407637 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
HERC3-203ENST00000407637 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
HERC3-203ENST00000407637 SSFA2P28290 1259 aa15.97■□□□□ 0.15
HERC3-203ENST00000407637 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
HERC3-203ENST00000407637 PDLIM2Q96JY6 352 aa15.97■□□□□ 0.15
HERC3-203ENST00000407637 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
HERC3-203ENST00000407637 KIF20AO95235 890 aa15.96■□□□□ 0.14
HERC3-203ENST00000407637 SNX21Q969T3 373 aa15.96■□□□□ 0.14
HERC3-203ENST00000407637 GTPBP4Q9BZE4 634 aaKnown RBP15.96■□□□□ 0.14
HERC3-203ENST00000407637 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.14
HERC3-203ENST00000407637 ABCC2Q92887 1545 aa15.96■□□□□ 0.14
HERC3-203ENST00000407637 RBSNQ9H1K0 784 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 WDR62O43379 1518 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 ZBTB7CA1YPR0 619 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 TSC1Q92574 1164 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 TMEM51Q9NW97 253 aa15.95■□□□□ 0.14
HERC3-203ENST00000407637 NUP155O75694 1391 aa15.94■□□□□ 0.14
HERC3-203ENST00000407637 MAGI2Q86UL8 1455 aa15.94■□□□□ 0.14
HERC3-203ENST00000407637 ZNF445P59923 1031 aa15.94■□□□□ 0.14
HERC3-203ENST00000407637 CROCC2H7BZ55 1655 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms