RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NOS1P29475 1434 aa33.74■■■□□ 2.99
DNMT3A-206ENST00000406659 ARHGAP31Q2M1Z3 1444 aa33.74■■■□□ 2.99
DNMT3A-206ENST00000406659 FAM9BQ8IZU0 186 aa33.7■■■□□ 2.99
DNMT3A-206ENST00000406659 EIF3AQ14152 1382 aaKnown RBP33.7■■■□□ 2.98
DNMT3A-206ENST00000406659 CFAP70Q5T0N1 1121 aa33.7■■■□□ 2.98
DNMT3A-206ENST00000406659 SIGLEC1Q9BZZ2 1709 aa33.69■■■□□ 2.98
DNMT3A-206ENST00000406659 NRXN1Q9ULB1 1477 aa33.68■■■□□ 2.98
DNMT3A-206ENST00000406659 RPGRIP1LQ68CZ1 1315 aa33.68■■■□□ 2.98
DNMT3A-206ENST00000406659 KTN1Q86UP2 1357 aaKnown RBP33.68■■■□□ 2.98
DNMT3A-206ENST00000406659 RALBP1Q15311 655 aa33.65■■■□□ 2.98
DNMT3A-206ENST00000406659 KIF13AQ9H1H9 1805 aa33.64■■■□□ 2.98
DNMT3A-206ENST00000406659 SYNMO15061 1565 aa33.64■■■□□ 2.98
DNMT3A-206ENST00000406659 PPLO60437 1756 aa33.63■■■□□ 2.97
DNMT3A-206ENST00000406659 PIK3C2BO00750 1634 aa33.63■■■□□ 2.97
DNMT3A-206ENST00000406659 CDCA8Q53HL2 280 aa33.62■■■□□ 2.97
DNMT3A-206ENST00000406659 REREQ9P2R6 1566 aa33.62■■■□□ 2.97
DNMT3A-206ENST00000406659 AGLP35573 1532 aa33.58■■■□□ 2.97
DNMT3A-206ENST00000406659 PER1O15534 1290 aaPredicted RBP33.57■■■□□ 2.97
DNMT3A-206ENST00000406659 PANK3Q9H999 370 aa33.57■■■□□ 2.97
DNMT3A-206ENST00000406659 SLC52A1Q9NWF4 448 aa33.57■■■□□ 2.97
DNMT3A-206ENST00000406659 SLC24A1O60721 1099 aa33.57■■■□□ 2.96
DNMT3A-206ENST00000406659 MYBBP1AQ9BQG0 1328 aaKnown RBP33.56■■■□□ 2.96
DNMT3A-206ENST00000406659 PPP6R1Q9UPN7 881 aa33.56■■■□□ 2.96
DNMT3A-206ENST00000406659 TMC1Q8TDI8 760 aa33.55■■■□□ 2.96
DNMT3A-206ENST00000406659 PIK3C2GO75747 1445 aa33.54■■■□□ 2.96
DNMT3A-206ENST00000406659 IDI1Q13907 227 aa33.54■■■□□ 2.96
DNMT3A-206ENST00000406659 SETBP1Q9Y6X0 1596 aa33.53■■■□□ 2.96
DNMT3A-206ENST00000406659 C14orf93Q9H972 538 aaKnown RBP33.53■■■□□ 2.96
DNMT3A-206ENST00000406659 PREX1Q8TCU6 1659 aa33.52■■■□□ 2.96
DNMT3A-206ENST00000406659 VGFO15240 615 aaPredicted RBP33.51■■■□□ 2.95
DNMT3A-206ENST00000406659 SUPT16HQ9Y5B9 1047 aaKnown RBP33.51■■■□□ 2.95
DNMT3A-206ENST00000406659 BRD4O60885 1362 aaPredicted RBP33.5■■■□□ 2.95
DNMT3A-206ENST00000406659 PARD3Q8TEW0 1356 aa33.49■■■□□ 2.95
DNMT3A-206ENST00000406659 NEXMIFQ5QGS0 1516 aa33.46■■■□□ 2.95
DNMT3A-206ENST00000406659 ARHGEF40Q8TER5 1519 aa33.44■■■□□ 2.94
DNMT3A-206ENST00000406659 PNISRQ8TF01 805 aaKnown RBP33.44■■■□□ 2.94
DNMT3A-206ENST00000406659 ZBED9Q6R2W3 1325 aa33.44■■■□□ 2.94
DNMT3A-206ENST00000406659 FBXO31Q5XUX0 539 aaPredicted RBP33.43■■■□□ 2.94
DNMT3A-206ENST00000406659 MYO3AQ8NEV4 1616 aa33.42■■■□□ 2.94
DNMT3A-206ENST00000406659 CC2D1BQ5T0F9 858 aaKnown RBP33.42■■■□□ 2.94
DNMT3A-206ENST00000406659 NLRP13Q86W25 1043 aa33.42■■■□□ 2.94
DNMT3A-206ENST00000406659 KDM5AP29375 1690 aaKnown RBP33.41■■■□□ 2.94
DNMT3A-206ENST00000406659 ERVK-7P63135 1459 aa33.41■■■□□ 2.94
DNMT3A-206ENST00000406659 NUTM2DQ5VT03 806 aaPredicted RBP33.41■■■□□ 2.94
DNMT3A-206ENST00000406659 CENPJQ9HC77 1338 aaPredicted RBP33.4■■■□□ 2.94
DNMT3A-206ENST00000406659 NEFLP07196 543 aa33.39■■■□□ 2.94
DNMT3A-206ENST00000406659 ADGRB1O14514 1584 aa33.39■■■□□ 2.94
DNMT3A-206ENST00000406659 TRAK1Q9UPV9 953 aa33.39■■■□□ 2.94
DNMT3A-206ENST00000406659 KNSTRNQ9Y448 316 aa33.39■■■□□ 2.94
DNMT3A-206ENST00000406659 CLTCQ00610 1675 aaKnown RBP33.39■■■□□ 2.94
DNMT3A-206ENST00000406659 MLECQ14165 292 aa33.38■■■□□ 2.93
DNMT3A-206ENST00000406659 SBNO2Q9Y2G9 1366 aa33.38■■■□□ 2.93
DNMT3A-206ENST00000406659 TMEM131LA2VDJ0 1609 aa33.38■■■□□ 2.93
DNMT3A-206ENST00000406659 ZFYVE9O95405 1425 aa33.38■■■□□ 2.93
DNMT3A-206ENST00000406659 TMEM132EQ6IEE7 984 aa33.37■■■□□ 2.93
DNMT3A-206ENST00000406659 MYO5BQ9ULV0 1848 aa33.35■■■□□ 2.93
DNMT3A-206ENST00000406659 FKBP8Q14318 412 aa33.34■■■□□ 2.93
DNMT3A-206ENST00000406659 MYOM1P52179 1685 aa33.33■■■□□ 2.93
DNMT3A-206ENST00000406659 STAG3Q9UJ98 1225 aa33.31■■■□□ 2.92
DNMT3A-206ENST00000406659 LRPPRCP42704 1394 aaKnown RBP33.3■■■□□ 2.92
DNMT3A-206ENST00000406659 DNAJC5Q9H3Z4 198 aa33.29■■■□□ 2.92
DNMT3A-206ENST00000406659 ESF1Q9H501 851 aaKnown RBP33.29■■■□□ 2.92
DNMT3A-206ENST00000406659 QRICH2Q9H0J4 1663 aa33.27■■■□□ 2.92
DNMT3A-206ENST00000406659 AMER1Q5JTC6 1135 aaPredicted RBP33.25■■■□□ 2.91
DNMT3A-206ENST00000406659 SPATA31D1Q6ZQQ2 1576 aa33.25■■■□□ 2.91
DNMT3A-206ENST00000406659 ASXL1Q8IXJ9 1541 aa33.25■■■□□ 2.91
DNMT3A-206ENST00000406659 NPC1L1Q9UHC9 1359 aa33.2■■■□□ 2.91
DNMT3A-206ENST00000406659 ARHGEF28Q8N1W1 1705 aaKnown RBP33.17■■■□□ 2.9
DNMT3A-206ENST00000406659 ZMYM3Q14202 1370 aa33.16■■■□□ 2.9
DNMT3A-206ENST00000406659 SENP3Q9H4L4 574 aaPredicted RBP33.15■■■□□ 2.9
DNMT3A-206ENST00000406659 A2ML1A8K2U0 1454 aa33.14■■■□□ 2.9
DNMT3A-206ENST00000406659 PPP2R1AP30153 589 aa33.14■■■□□ 2.9
DNMT3A-206ENST00000406659 STK26Q9P289 416 aa33.13■■■□□ 2.89
DNMT3A-206ENST00000406659 EVC2Q86UK5 1308 aa33.12■■■□□ 2.89
DNMT3A-206ENST00000406659 BCANQ96GW7 911 aa33.11■■■□□ 2.89
DNMT3A-206ENST00000406659 PUS7Q96PZ0 661 aaKnown RBP33.11■■■□□ 2.89
DNMT3A-206ENST00000406659 CARD14Q9BXL6 1004 aa33.1■■■□□ 2.89
DNMT3A-206ENST00000406659 SMG6Q86US8 1419 aaKnown RBP33.09■■■□□ 2.89
DNMT3A-206ENST00000406659 RIMS2Q9UQ26 1411 aa33.08■■■□□ 2.89
DNMT3A-206ENST00000406659 PELP1Q8IZL8 1130 aaKnown RBP33.08■■■□□ 2.89
DNMT3A-206ENST00000406659 ALKQ9UM73 1620 aa33.08■■■□□ 2.89
DNMT3A-206ENST00000406659 INSRP06213 1382 aa33.07■■■□□ 2.88
DNMT3A-206ENST00000406659 YTHDC2Q9H6S0 1430 aaKnown RBP33.05■■■□□ 2.88
DNMT3A-206ENST00000406659 SENP3-EIF4A1A0A087X0R7 540 aa33.05■■■□□ 2.88
DNMT3A-206ENST00000406659 SLC12A5Q9H2X9 1139 aa33.04■■■□□ 2.88
DNMT3A-206ENST00000406659 NUDCQ9Y266 331 aa33.04■■■□□ 2.88
DNMT3A-206ENST00000406659 SAFB2Q14151 953 aaKnown RBP eCLIP33.03■■■□□ 2.88
DNMT3A-206ENST00000406659 TULP4Q9NRJ4 1543 aa33.02■■■□□ 2.88
DNMT3A-206ENST00000406659 TNRQ92752 1358 aa33.01■■■□□ 2.87
DNMT3A-206ENST00000406659 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.01■■■□□ 2.87
DNMT3A-206ENST00000406659 POGKQ9P215 609 aa33.01■■■□□ 2.87
DNMT3A-206ENST00000406659 PTPRMP28827 1452 aa33■■■□□ 2.87
DNMT3A-206ENST00000406659 PRAM1Q96QH2 718 aa32.98■■■□□ 2.87
DNMT3A-206ENST00000406659 BLMP54132 1417 aaPredicted RBP32.98■■■□□ 2.87
DNMT3A-206ENST00000406659 NSD3Q9BZ95 1437 aa32.98■■■□□ 2.87
DNMT3A-206ENST00000406659 WDR43Q15061 677 aaKnown RBP eCLIP32.96■■■□□ 2.87
DNMT3A-206ENST00000406659 TRHP20396 242 aaPredicted RBP32.96■■■□□ 2.87
DNMT3A-206ENST00000406659 CABP2Q9NPB3 220 aa32.96■■■□□ 2.87
DNMT3A-206ENST00000406659 HDGFP51858 240 aaKnown RBP32.95■■■□□ 2.87
DNMT3A-206ENST00000406659 IRX6P78412 446 aaPredicted RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms