RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 USP47Q96K76 1375 aa14.77□□□□□ -0.05
RAPGEF3-204ENST00000405493 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-204ENST00000405493 DIAPH1O60610 1272 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-204ENST00000405493 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
RAPGEF3-204ENST00000405493 KIF14Q15058 1648 aa14.76□□□□□ -0.05
RAPGEF3-204ENST00000405493 APBB1O00213 710 aa14.76□□□□□ -0.05
RAPGEF3-204ENST00000405493 MCCP23508 829 aa14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 TULP1O00294 542 aaPredicted RBP14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 NEXNQ0ZGT2 675 aa14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 DNTTIP2Q5QJE6 756 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-204ENST00000405493 NGEFQ8N5V2 710 aa14.74□□□□□ -0.05
RAPGEF3-204ENST00000405493 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
RAPGEF3-204ENST00000405493 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
RAPGEF3-204ENST00000405493 FANCIQ9NVI1 1328 aa14.74□□□□□ -0.05
RAPGEF3-204ENST00000405493 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-204ENST00000405493 NUTM2BA6NNL0 878 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-204ENST00000405493 NUTM2EB1AL46 878 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-204ENST00000405493 NUTM2AQ8IVF1 878 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-204ENST00000405493 CCDC146Q8IYE0 955 aa14.73□□□□□ -0.05
RAPGEF3-204ENST00000405493 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 FANCAO15360 1455 aa14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 TMEM132EQ6IEE7 984 aa14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 SUPT6HQ7KZ85 1726 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 DDX58O95786 925 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-204ENST00000405493 MYBBP1AQ9BQG0 1328 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-204ENST00000405493 HSP90B1P14625 803 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-204ENST00000405493 PRAM1Q96QH2 718 aa14.71□□□□□ -0.06
RAPGEF3-204ENST00000405493 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
RAPGEF3-204ENST00000405493 PDE3BQ13370 1112 aa14.7□□□□□ -0.06
RAPGEF3-204ENST00000405493 KIAA1211Q6ZU35 1233 aa14.7□□□□□ -0.06
RAPGEF3-204ENST00000405493 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
RAPGEF3-204ENST00000405493 DAPK1P53355 1430 aa14.69□□□□□ -0.06
RAPGEF3-204ENST00000405493 ASXL2Q76L83 1435 aa14.69□□□□□ -0.06
RAPGEF3-204ENST00000405493 CDK13Q14004 1512 aaKnown RBP14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 PRDM11Q9NQV5 511 aa14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 TATP17735 454 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 KIAA1107Q9UPP5 1409 aa14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 TOM1O60784 492 aa14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 RWDD1Q9H446 243 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
RAPGEF3-204ENST00000405493 LRPPRCP42704 1394 aaKnown RBP14.67□□□□□ -0.06
RAPGEF3-204ENST00000405493 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
RAPGEF3-204ENST00000405493 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
RAPGEF3-204ENST00000405493 SLC4A10Q6U841 1118 aa14.67□□□□□ -0.06
RAPGEF3-204ENST00000405493 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-204ENST00000405493 STRN4Q9NRL3 753 aa14.66□□□□□ -0.06
RAPGEF3-204ENST00000405493 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
RAPGEF3-204ENST00000405493 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
RAPGEF3-204ENST00000405493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.06
RAPGEF3-204ENST00000405493 GOLGA6L4A6NEF3 574 aa14.65□□□□□ -0.06
RAPGEF3-204ENST00000405493 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
RAPGEF3-204ENST00000405493 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
RAPGEF3-204ENST00000405493 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 NOL10Q9BSC4 688 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 GOLGA6L6A8MZA4 724 aa14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 LRRFIP1Q32MZ4 808 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-204ENST00000405493 WDR62O43379 1518 aa14.63□□□□□ -0.07
RAPGEF3-204ENST00000405493 ATAD2Q6PL18 1390 aa14.63□□□□□ -0.07
RAPGEF3-204ENST00000405493 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
RAPGEF3-204ENST00000405493 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
RAPGEF3-204ENST00000405493 WDR7Q9Y4E6 1490 aa14.62□□□□□ -0.07
RAPGEF3-204ENST00000405493 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
RAPGEF3-204ENST00000405493 TNRQ92752 1358 aa14.62□□□□□ -0.07
RAPGEF3-204ENST00000405493 DHX29Q7Z478 1369 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-204ENST00000405493 SPG7Q9UQ90 795 aa14.61□□□□□ -0.07
RAPGEF3-204ENST00000405493 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
RAPGEF3-204ENST00000405493 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
RAPGEF3-204ENST00000405493 CAMSAP2Q08AD1 1489 aa14.6□□□□□ -0.07
RAPGEF3-204ENST00000405493 GGNBP2Q9H3C7 697 aa14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 GNAI1P63096 354 aa14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 RRP7AQ9Y3A4 280 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 PLCH2O75038 1416 aa14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-204ENST00000405493 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-204ENST00000405493 WWC1Q8IX03 1113 aa14.58□□□□□ -0.07
RAPGEF3-204ENST00000405493 RBM33Q96EV2 1170 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-204ENST00000405493 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-204ENST00000405493 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.08
RAPGEF3-204ENST00000405493 E9PSI1 815 aa14.58□□□□□ -0.08
RAPGEF3-204ENST00000405493 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
RAPGEF3-204ENST00000405493 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
RAPGEF3-204ENST00000405493 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 SLKQ9H2G2 1235 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 MSH6P52701 1360 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 ZNF518AQ6AHZ1 1483 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 RIPK4P57078 832 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 GNL2Q13823 731 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 PNISRQ8TF01 805 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms