RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
NCOA1-204ENST00000405141 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
NCOA1-204ENST00000405141 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
NCOA1-204ENST00000405141 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
NCOA1-204ENST00000405141 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
NCOA1-204ENST00000405141 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
NCOA1-204ENST00000405141 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
NCOA1-204ENST00000405141 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
NCOA1-204ENST00000405141 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
NCOA1-204ENST00000405141 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
NCOA1-204ENST00000405141 EVC2Q86UK5 1308 aa11.67□□□□□ -0.54
NCOA1-204ENST00000405141 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
NCOA1-204ENST00000405141 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
NCOA1-204ENST00000405141 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
NCOA1-204ENST00000405141 SF3A1Q15459 793 aaKnown RBP11.67□□□□□ -0.54
NCOA1-204ENST00000405141 R3HCC1Q9Y3T6 440 aaKnown RBP11.66□□□□□ -0.54
NCOA1-204ENST00000405141 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
NCOA1-204ENST00000405141 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
NCOA1-204ENST00000405141 BCAR3O75815 825 aa11.66□□□□□ -0.54
NCOA1-204ENST00000405141 FOSBP53539 338 aa11.66□□□□□ -0.54
NCOA1-204ENST00000405141 CCAR2Q8N163 923 aaKnown RBP11.66□□□□□ -0.54
NCOA1-204ENST00000405141 HMOX1P09601 288 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
NCOA1-204ENST00000405141 FAM184AQ8NB25 1140 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 COG3Q96JB2 828 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 GOLGA6L19H0YKK7 550 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 TRAK2O60296 914 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 GOLGA6L1Q8N7Z2 621 aa11.65□□□□□ -0.54
NCOA1-204ENST00000405141 PDE4CQ08493 712 aa11.65□□□□□ -0.55
NCOA1-204ENST00000405141 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
NCOA1-204ENST00000405141 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 DIAPH3Q9NSV4 1193 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 REC8O95072 547 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 BACH2Q9BYV9 841 aa11.64□□□□□ -0.55
NCOA1-204ENST00000405141 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
NCOA1-204ENST00000405141 C1orf115Q9H7X2 142 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 RNF214Q8ND24 703 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 BECN2A8MW95 431 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 MRE11P49959 708 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
NCOA1-204ENST00000405141 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
NCOA1-204ENST00000405141 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
NCOA1-204ENST00000405141 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
NCOA1-204ENST00000405141 CASKIN1Q8WXD9 1431 aa11.62□□□□□ -0.55
NCOA1-204ENST00000405141 CFTRP13569 1480 aa11.62□□□□□ -0.55
NCOA1-204ENST00000405141 VPS37CA5D8V6 355 aaPredicted RBP11.61□□□□□ -0.55
NCOA1-204ENST00000405141 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
NCOA1-204ENST00000405141 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
NCOA1-204ENST00000405141 CAVIN1Q6NZI2 390 aaKnown RBP11.61□□□□□ -0.55
NCOA1-204ENST00000405141 GGNBP2Q9H3C7 697 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
NCOA1-204ENST00000405141 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
NCOA1-204ENST00000405141 CDC45O75419 566 aa11.6□□□□□ -0.55
NCOA1-204ENST00000405141 NUCB2P80303 420 aa11.6□□□□□ -0.55
NCOA1-204ENST00000405141 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
NCOA1-204ENST00000405141 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
NCOA1-204ENST00000405141 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
NCOA1-204ENST00000405141 ANKRD50Q9ULJ7 1429 aa11.59□□□□□ -0.55
NCOA1-204ENST00000405141 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
NCOA1-204ENST00000405141 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
NCOA1-204ENST00000405141 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
NCOA1-204ENST00000405141 TMEM132EQ6IEE7 984 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 TPD52L1Q16890 204 aaPredicted RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 PNISRQ8TF01 805 aaKnown RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 PRPF40AO75400 957 aaKnown RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 TPM3P06753 285 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 NESP48681 1621 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
NCOA1-204ENST00000405141 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
NCOA1-204ENST00000405141 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
NCOA1-204ENST00000405141 MTHFSP49914 203 aa11.57□□□□□ -0.56
NCOA1-204ENST00000405141 C9orf78Q9NZ63 289 aaPredicted RBP11.57□□□□□ -0.56
NCOA1-204ENST00000405141 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
NCOA1-204ENST00000405141 PTPRGP23470 1445 aa11.56□□□□□ -0.56
NCOA1-204ENST00000405141 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
NCOA1-204ENST00000405141 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
NCOA1-204ENST00000405141 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.568e-7■■■■■ 28.7
NCOA1-204ENST00000405141 MPNDQ8N594 471 aa11.56□□□□□ -0.56
NCOA1-204ENST00000405141 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
NCOA1-204ENST00000405141 RUFY2Q8WXA3 655 aa11.55□□□□□ -0.56
NCOA1-204ENST00000405141 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms