RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
SDF4-203ENST00000403997 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
SDF4-203ENST00000403997 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
SDF4-203ENST00000403997 LRRC7Q96NW7 1537 aa20.03■□□□□ 0.8
SDF4-203ENST00000403997 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.03■□□□□ 0.8
SDF4-203ENST00000403997 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
SDF4-203ENST00000403997 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.79
SDF4-203ENST00000403997 KCNA6P17658 529 aa20.01■□□□□ 0.79
SDF4-203ENST00000403997 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
SDF4-203ENST00000403997 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
SDF4-203ENST00000403997 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
SDF4-203ENST00000403997 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
SDF4-203ENST00000403997 PLEKHG1Q9ULL1 1385 aa19.98■□□□□ 0.79
SDF4-203ENST00000403997 PROSER2Q86WR7 435 aaPredicted RBP19.96■□□□□ 0.79
SDF4-203ENST00000403997 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
SDF4-203ENST00000403997 HSPA1LP34931 641 aa19.95■□□□□ 0.78
SDF4-203ENST00000403997 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
SDF4-203ENST00000403997 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SDF4-203ENST00000403997 RBM33Q96EV2 1170 aaKnown RBP19.93■□□□□ 0.78
SDF4-203ENST00000403997 SPHKAPQ2M3C7 1700 aa19.92■□□□□ 0.78
SDF4-203ENST00000403997 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
SDF4-203ENST00000403997 ALKQ9UM73 1620 aa19.89■□□□□ 0.77
SDF4-203ENST00000403997 ADAMTS13Q76LX8 1427 aa19.87■□□□□ 0.77
SDF4-203ENST00000403997 FOXD1Q16676 465 aa19.86■□□□□ 0.77
SDF4-203ENST00000403997 TRPM2O94759 1503 aa19.86■□□□□ 0.77
SDF4-203ENST00000403997 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
SDF4-203ENST00000403997 XIRP1Q702N8 1843 aaKnown RBP19.86■□□□□ 0.77
SDF4-203ENST00000403997 CLTCL1P53675 1640 aa19.84■□□□□ 0.77
SDF4-203ENST00000403997 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
SDF4-203ENST00000403997 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
SDF4-203ENST00000403997 MSH6P52701 1360 aa19.83■□□□□ 0.76
SDF4-203ENST00000403997 PIK3R4Q99570 1358 aa19.83■□□□□ 0.76
SDF4-203ENST00000403997 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
SDF4-203ENST00000403997 C14orf37Q86TY3 774 aa19.82■□□□□ 0.76
SDF4-203ENST00000403997 AMOTL2Q9Y2J4 779 aa19.82■□□□□ 0.76
SDF4-203ENST00000403997 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
SDF4-203ENST00000403997 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
SDF4-203ENST00000403997 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
SDF4-203ENST00000403997 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
SDF4-203ENST00000403997 KIF1BO60333 1816 aa19.79■□□□□ 0.76
SDF4-203ENST00000403997 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.76
SDF4-203ENST00000403997 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
SDF4-203ENST00000403997 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
SDF4-203ENST00000403997 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
SDF4-203ENST00000403997 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
SDF4-203ENST00000403997 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
SDF4-203ENST00000403997 SETBP1Q9Y6X0 1596 aa19.75■□□□□ 0.75
SDF4-203ENST00000403997 METP08581 1390 aa19.75■□□□□ 0.75
SDF4-203ENST00000403997 C19orf44Q9H6X5 657 aa19.74■□□□□ 0.75
SDF4-203ENST00000403997 ATF3P18847 181 aa19.73■□□□□ 0.75
SDF4-203ENST00000403997 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
SDF4-203ENST00000403997 CCDC144AA2RUR9 1427 aa19.73■□□□□ 0.75
SDF4-203ENST00000403997 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
SDF4-203ENST00000403997 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
SDF4-203ENST00000403997 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
SDF4-203ENST00000403997 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
SDF4-203ENST00000403997 ROBO1Q9Y6N7 1651 aa19.67■□□□□ 0.74
SDF4-203ENST00000403997 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
SDF4-203ENST00000403997 ADGRF5Q8IZF2 1346 aa19.65■□□□□ 0.74
SDF4-203ENST00000403997 SPATA31E1Q6ZUB1 1445 aa19.64■□□□□ 0.73
SDF4-203ENST00000403997 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.73
SDF4-203ENST00000403997 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.73
SDF4-203ENST00000403997 PPLO60437 1756 aa19.62■□□□□ 0.73
SDF4-203ENST00000403997 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
SDF4-203ENST00000403997 HRCP23327 699 aa19.61■□□□□ 0.73
SDF4-203ENST00000403997 DCCP43146 1447 aa19.59■□□□□ 0.73
SDF4-203ENST00000403997 BRINP3Q76B58 766 aa19.58■□□□□ 0.72
SDF4-203ENST00000403997 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
SDF4-203ENST00000403997 STK26Q9P289 416 aa19.57■□□□□ 0.72
SDF4-203ENST00000403997 ADGRL3Q9HAR2 1447 aa19.57■□□□□ 0.72
SDF4-203ENST00000403997 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
SDF4-203ENST00000403997 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
SDF4-203ENST00000403997 SETD1AO15047 1707 aaKnown RBP19.55■□□□□ 0.72
SDF4-203ENST00000403997 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
SDF4-203ENST00000403997 JCADQ9P266 1359 aa19.55■□□□□ 0.72
SDF4-203ENST00000403997 MST1RQ04912 1400 aa19.54■□□□□ 0.72
SDF4-203ENST00000403997 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
SDF4-203ENST00000403997 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
SDF4-203ENST00000403997 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
SDF4-203ENST00000403997 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
SDF4-203ENST00000403997 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
SDF4-203ENST00000403997 IFT172Q9UG01 1749 aa19.5■□□□□ 0.71
SDF4-203ENST00000403997 NALCNQ8IZF0 1738 aa19.49■□□□□ 0.71
SDF4-203ENST00000403997 CFAP70Q5T0N1 1121 aa19.49■□□□□ 0.71
SDF4-203ENST00000403997 RGS17Q9UGC6 210 aaPredicted RBP19.49■□□□□ 0.71
SDF4-203ENST00000403997 KDM2AQ9Y2K7 1162 aa19.49■□□□□ 0.71
SDF4-203ENST00000403997 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
SDF4-203ENST00000403997 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
SDF4-203ENST00000403997 ABCC11Q96J66 1382 aa19.48■□□□□ 0.71
SDF4-203ENST00000403997 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
SDF4-203ENST00000403997 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
SDF4-203ENST00000403997 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
SDF4-203ENST00000403997 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
SDF4-203ENST00000403997 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
SDF4-203ENST00000403997 SPATA31A6Q5VVP1 1343 aa19.46■□□□□ 0.71
SDF4-203ENST00000403997 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
SDF4-203ENST00000403997 YTHDC2Q9H6S0 1430 aaKnown RBP19.45■□□□□ 0.7
SDF4-203ENST00000403997 LRRC59Q96AG4 307 aaKnown RBP19.45■□□□□ 0.7
SDF4-203ENST00000403997 MYOM2P54296 1465 aa19.45■□□□□ 0.7
SDF4-203ENST00000403997 TECPR2O15040 1411 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms