RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 ITGBL1O95965 494 aaPredicted RBP10.62□□□□□ -0.71
SAMSN1-202ENST00000400564 SWT1Q5T5J6 900 aaKnown RBP10.62□□□□□ -0.71
SAMSN1-202ENST00000400564 DNAJB2P25686 324 aa10.6□□□□□ -0.71
SAMSN1-202ENST00000400564 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
SAMSN1-202ENST00000400564 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
SAMSN1-202ENST00000400564 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
SAMSN1-202ENST00000400564 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
SAMSN1-202ENST00000400564 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
SAMSN1-202ENST00000400564 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
SAMSN1-202ENST00000400564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
SAMSN1-202ENST00000400564 RNF40O75150 1001 aa10.57□□□□□ -0.72
SAMSN1-202ENST00000400564 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
SAMSN1-202ENST00000400564 NYAP1Q6ZVC0 841 aa10.55□□□□□ -0.72
SAMSN1-202ENST00000400564 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
SAMSN1-202ENST00000400564 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
SAMSN1-202ENST00000400564 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
SAMSN1-202ENST00000400564 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.72
SAMSN1-202ENST00000400564 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.72
SAMSN1-202ENST00000400564 AK7Q96M32 723 aa10.52□□□□□ -0.72
SAMSN1-202ENST00000400564 TRIM66O15016 1216 aa10.52□□□□□ -0.73
SAMSN1-202ENST00000400564 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
SAMSN1-202ENST00000400564 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
SAMSN1-202ENST00000400564 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
SAMSN1-202ENST00000400564 KCNC4Q03721 635 aa10.5□□□□□ -0.73
SAMSN1-202ENST00000400564 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
SAMSN1-202ENST00000400564 PPP4CP60510 307 aa10.49□□□□□ -0.73
SAMSN1-202ENST00000400564 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
SAMSN1-202ENST00000400564 SLC10A3P09131 477 aa10.48□□□□□ -0.73
SAMSN1-202ENST00000400564 AMHR2Q16671 573 aa10.47□□□□□ -0.73
SAMSN1-202ENST00000400564 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.74
SAMSN1-202ENST00000400564 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.74
SAMSN1-202ENST00000400564 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
SAMSN1-202ENST00000400564 APLP1P51693 650 aa10.45□□□□□ -0.74
SAMSN1-202ENST00000400564 GPCPD1Q9NPB8 672 aa10.45□□□□□ -0.74
SAMSN1-202ENST00000400564 CLCN1P35523 988 aa10.44□□□□□ -0.74
SAMSN1-202ENST00000400564 PDE4DQ08499 809 aa10.44□□□□□ -0.74
SAMSN1-202ENST00000400564 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
SAMSN1-202ENST00000400564 RDH13Q8NBN7 331 aa10.44□□□□□ -0.74
SAMSN1-202ENST00000400564 CFHP08603 1231 aa10.42□□□□□ -0.74
SAMSN1-202ENST00000400564 TRAF7Q6Q0C0 670 aa10.42□□□□□ -0.74
SAMSN1-202ENST00000400564 GIGYF2Q6Y7W6 1299 aaKnown RBP10.42□□□□□ -0.74
SAMSN1-202ENST00000400564 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
SAMSN1-202ENST00000400564 GFRA3O60609 400 aa10.4□□□□□ -0.74
SAMSN1-202ENST00000400564 SULF1Q8IWU6 871 aa10.4□□□□□ -0.74
SAMSN1-202ENST00000400564 CD46P15529 392 aa10.39□□□□□ -0.75
SAMSN1-202ENST00000400564 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
SAMSN1-202ENST00000400564 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
SAMSN1-202ENST00000400564 MS4A1P11836 297 aa10.37□□□□□ -0.75
SAMSN1-202ENST00000400564 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
SAMSN1-202ENST00000400564 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
SAMSN1-202ENST00000400564 GPBP1L1Q9HC44 474 aaPredicted RBP10.37□□□□□ -0.75
SAMSN1-202ENST00000400564 GCGRP47871 477 aa10.36□□□□□ -0.75
SAMSN1-202ENST00000400564 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
SAMSN1-202ENST00000400564 LCE2BO14633 110 aa10.34□□□□□ -0.75
SAMSN1-202ENST00000400564 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
SAMSN1-202ENST00000400564 MTRQ99707 1265 aa10.34□□□□□ -0.75
SAMSN1-202ENST00000400564 COPS2P61201 443 aa10.33□□□□□ -0.76
SAMSN1-202ENST00000400564 FUT2Q10981 343 aa10.33□□□□□ -0.76
SAMSN1-202ENST00000400564 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
SAMSN1-202ENST00000400564 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
SAMSN1-202ENST00000400564 PCDHB3Q9Y5E6 796 aa10.33□□□□□ -0.76
SAMSN1-202ENST00000400564 TJAP1Q5JTD0 557 aa10.32□□□□□ -0.76
SAMSN1-202ENST00000400564 BLOC1S3Q6QNY0 202 aa10.32□□□□□ -0.76
SAMSN1-202ENST00000400564 ZNF516Q92618 1163 aa10.31□□□□□ -0.76
SAMSN1-202ENST00000400564 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
SAMSN1-202ENST00000400564 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
SAMSN1-202ENST00000400564 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
SAMSN1-202ENST00000400564 HLA-CQ95604 372 aa10.29□□□□□ -0.76
SAMSN1-202ENST00000400564 KDM4AO75164 1064 aa10.28□□□□□ -0.76
SAMSN1-202ENST00000400564 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
SAMSN1-202ENST00000400564 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.76
SAMSN1-202ENST00000400564 IL21Q9HBE4 155 aa10.27□□□□□ -0.76
SAMSN1-202ENST00000400564 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 MORN1Q5T089 497 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 TLL1O43897 1013 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 NUTM1Q86Y26 1132 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
SAMSN1-202ENST00000400564 HOXA2O43364 376 aa10.25□□□□□ -0.77
SAMSN1-202ENST00000400564 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
SAMSN1-202ENST00000400564 FAM117AQ9C073 453 aa10.25□□□□□ -0.77
SAMSN1-202ENST00000400564 ZPR1O75312 459 aa10.24□□□□□ -0.77
SAMSN1-202ENST00000400564 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
SAMSN1-202ENST00000400564 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
SAMSN1-202ENST00000400564 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
SAMSN1-202ENST00000400564 TBC1D2Q9BYX2 928 aa10.23□□□□□ -0.77
SAMSN1-202ENST00000400564 NDUFV2P19404 249 aa10.22□□□□□ -0.77
SAMSN1-202ENST00000400564 USP46P62068 366 aa10.22□□□□□ -0.77
SAMSN1-202ENST00000400564 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.78
SAMSN1-202ENST00000400564 NR1I2O75469 434 aa10.21□□□□□ -0.78
SAMSN1-202ENST00000400564 GRIPAP1Q4V328 841 aa10.2□□□□□ -0.78
SAMSN1-202ENST00000400564 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
SAMSN1-202ENST00000400564 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
SAMSN1-202ENST00000400564 PCDHGC3Q9UN70 934 aa10.18□□□□□ -0.78
SAMSN1-202ENST00000400564 MYSM1Q5VVJ2 828 aa10.17□□□□□ -0.78
SAMSN1-202ENST00000400564 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
SAMSN1-202ENST00000400564 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
SAMSN1-202ENST00000400564 FDX1P10109 184 aa10.16□□□□□ -0.78
SAMSN1-202ENST00000400564 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms