RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
PPP4R1-203ENST00000400556 KIF3BO15066 747 aa13.78□□□□□ -0.2
PPP4R1-203ENST00000400556 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
PPP4R1-203ENST00000400556 SLFN5Q08AF3 891 aa13.77□□□□□ -0.2
PPP4R1-203ENST00000400556 BCL2L13Q9BXK5 485 aa13.77□□□□□ -0.2
PPP4R1-203ENST00000400556 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
PPP4R1-203ENST00000400556 CENPQQ7L2Z9 268 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-203ENST00000400556 NFKBIBQ15653 356 aa13.77□□□□□ -0.21
PPP4R1-203ENST00000400556 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
PPP4R1-203ENST00000400556 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
PPP4R1-203ENST00000400556 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
PPP4R1-203ENST00000400556 IGHDP01880 384 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 BRPF3Q9ULD4 1205 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 FAM161AQ3B820 660 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 UNC13BO14795 1591 aa13.75□□□□□ -0.21
PPP4R1-203ENST00000400556 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
PPP4R1-203ENST00000400556 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
PPP4R1-203ENST00000400556 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
PPP4R1-203ENST00000400556 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
PPP4R1-203ENST00000400556 TRAK1Q9UPV9 953 aa13.73□□□□□ -0.21
PPP4R1-203ENST00000400556 IQGAP3Q86VI3 1631 aa13.73□□□□□ -0.21
PPP4R1-203ENST00000400556 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
PPP4R1-203ENST00000400556 DUOX2Q9NRD8 1548 aa13.72□□□□□ -0.21
PPP4R1-203ENST00000400556 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-203ENST00000400556 SEC24BO95487 1268 aa13.71□□□□□ -0.21
PPP4R1-203ENST00000400556 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
PPP4R1-203ENST00000400556 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.21
PPP4R1-203ENST00000400556 TMEM132EQ6IEE7 984 aa13.71□□□□□ -0.22
PPP4R1-203ENST00000400556 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.71□□□□□ -0.22
PPP4R1-203ENST00000400556 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-203ENST00000400556 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
PPP4R1-203ENST00000400556 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-203ENST00000400556 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP4R1-203ENST00000400556 ATP10AO60312 1499 aa13.69□□□□□ -0.22
PPP4R1-203ENST00000400556 ASXL1Q8IXJ9 1541 aa13.69□□□□□ -0.22
PPP4R1-203ENST00000400556 PLCH2O75038 1416 aa13.69□□□□□ -0.22
PPP4R1-203ENST00000400556 CHD1O14646 1710 aa13.68□□□□□ -0.22
PPP4R1-203ENST00000400556 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-203ENST00000400556 ARXQ96QS3 562 aa13.68□□□□□ -0.22
PPP4R1-203ENST00000400556 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
PPP4R1-203ENST00000400556 GSE1Q14687 1217 aa13.68□□□□□ -0.22
PPP4R1-203ENST00000400556 MADDQ8WXG6 1647 aa13.67□□□□□ -0.22
PPP4R1-203ENST00000400556 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-203ENST00000400556 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
PPP4R1-203ENST00000400556 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
PPP4R1-203ENST00000400556 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
PPP4R1-203ENST00000400556 E9PSI1 815 aa13.66□□□□□ -0.22
PPP4R1-203ENST00000400556 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
PPP4R1-203ENST00000400556 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
PPP4R1-203ENST00000400556 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-203ENST00000400556 LAMC1P11047 1609 aa13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 TRMT2AQ8IZ69 625 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 RLBP1P12271 317 aa13.65□□□□□ -0.22
PPP4R1-203ENST00000400556 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-203ENST00000400556 GGT6Q6P531 493 aa13.64□□□□□ -0.23
PPP4R1-203ENST00000400556 TCP11L2Q8N4U5 519 aa13.64□□□□□ -0.23
PPP4R1-203ENST00000400556 EIF3AQ14152 1382 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-203ENST00000400556 PIK3C2GO75747 1445 aa13.63□□□□□ -0.23
PPP4R1-203ENST00000400556 INSRP06213 1382 aa13.62□□□□□ -0.23
PPP4R1-203ENST00000400556 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
PPP4R1-203ENST00000400556 MTHFSP49914 203 aa13.62□□□□□ -0.23
PPP4R1-203ENST00000400556 KANK1Q14678 1352 aa13.62□□□□□ -0.23
PPP4R1-203ENST00000400556 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
PPP4R1-203ENST00000400556 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
PPP4R1-203ENST00000400556 ABCC1P33527 1531 aa13.61□□□□□ -0.23
PPP4R1-203ENST00000400556 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
PPP4R1-203ENST00000400556 SYNMO15061 1565 aa13.61□□□□□ -0.23
PPP4R1-203ENST00000400556 USP19O94966 1318 aa13.6□□□□□ -0.23
PPP4R1-203ENST00000400556 MYOM1P52179 1685 aa13.6□□□□□ -0.23
PPP4R1-203ENST00000400556 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
PPP4R1-203ENST00000400556 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
PPP4R1-203ENST00000400556 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
PPP4R1-203ENST00000400556 TRPM2O94759 1503 aa13.59□□□□□ -0.23
PPP4R1-203ENST00000400556 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
PPP4R1-203ENST00000400556 RARSP54136 660 aaKnown RBP13.58□□□□□ -0.24
PPP4R1-203ENST00000400556 NOS1P29475 1434 aa13.58□□□□□ -0.24
PPP4R1-203ENST00000400556 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
PPP4R1-203ENST00000400556 STK26Q9P289 416 aa13.58□□□□□ -0.24
PPP4R1-203ENST00000400556 POGKQ9P215 609 aa13.58□□□□□ -0.24
PPP4R1-203ENST00000400556 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
PPP4R1-203ENST00000400556 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-203ENST00000400556 PTPRTO14522 1441 aa13.57□□□□□ -0.24
PPP4R1-203ENST00000400556 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
PPP4R1-203ENST00000400556 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
PPP4R1-203ENST00000400556 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
PPP4R1-203ENST00000400556 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-203ENST00000400556 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
PPP4R1-203ENST00000400556 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
PPP4R1-203ENST00000400556 FANCAO15360 1455 aa13.55□□□□□ -0.24
PPP4R1-203ENST00000400556 CEP152O94986 1710 aa13.54□□□□□ -0.24
PPP4R1-203ENST00000400556 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms