RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-218ENST00000399644 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-218ENST00000399644 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-218ENST00000399644 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 BECN2A8MW95 431 aa13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 PKD2Q13563 968 aa13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 COG3Q96JB2 828 aa13.6□□□□□ -0.23
CACNA1C-218ENST00000399644 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 CSPP1Q1MSJ5 1256 aa13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
CACNA1C-218ENST00000399644 NACADO15069 1562 aa13.58□□□□□ -0.23
CACNA1C-218ENST00000399644 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.23
CACNA1C-218ENST00000399644 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 SOGA1O94964 1423 aa13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-218ENST00000399644 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
CACNA1C-218ENST00000399644 FYB1O15117 783 aa13.57□□□□□ -0.24
CACNA1C-218ENST00000399644 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
CACNA1C-218ENST00000399644 EPS15P42566 896 aa13.56□□□□□ -0.24
CACNA1C-218ENST00000399644 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
CACNA1C-218ENST00000399644 C16orf71Q8IYS4 520 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-218ENST00000399644 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-218ENST00000399644 NF2P35240 595 aa13.56□□□□□ -0.24
CACNA1C-218ENST00000399644 CDR1P51861 262 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 PDILTQ8N807 584 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 PSMD1Q99460 953 aa13.55□□□□□ -0.24
CACNA1C-218ENST00000399644 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CACNA1C-218ENST00000399644 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-218ENST00000399644 NUP155O75694 1391 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 PHF14O94880 888 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
CACNA1C-218ENST00000399644 SEPT7Q16181 437 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-218ENST00000399644 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
CACNA1C-218ENST00000399644 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 EEA1Q15075 1411 aa13.51□□□□□ -0.25
CACNA1C-218ENST00000399644 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 TICAM2Q86XR7 235 aa13.5□□□□□ -0.25
CACNA1C-218ENST00000399644 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-218ENST00000399644 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
CACNA1C-218ENST00000399644 MNS1Q8NEH6 495 aa13.49□□□□□ -0.25
CACNA1C-218ENST00000399644 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CACNA1C-218ENST00000399644 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CACNA1C-218ENST00000399644 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 GRM1Q13255 1194 aa13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 FAM193AP78312 1265 aa13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 TRIM29Q14134 588 aa13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-218ENST00000399644 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-218ENST00000399644 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.25
CACNA1C-218ENST00000399644 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
CACNA1C-218ENST00000399644 PLIN1O60240 522 aa13.46□□□□□ -0.25
CACNA1C-218ENST00000399644 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
CACNA1C-218ENST00000399644 OFD1O75665 1012 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 NEBLO76041 1014 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 GIMAP7Q8NHV1 300 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CACNA1C-218ENST00000399644 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-218ENST00000399644 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-218ENST00000399644 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
CACNA1C-218ENST00000399644 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
CACNA1C-218ENST00000399644 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
CACNA1C-218ENST00000399644 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms