RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
LAMA3-203ENST00000399516 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
LAMA3-203ENST00000399516 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
LAMA3-203ENST00000399516 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
LAMA3-203ENST00000399516 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
LAMA3-203ENST00000399516 C22orf23Q9BZE7 217 aa13.71□□□□□ -0.21
LAMA3-203ENST00000399516 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
LAMA3-203ENST00000399516 NUCB2P80303 420 aa13.71□□□□□ -0.21
LAMA3-203ENST00000399516 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
LAMA3-203ENST00000399516 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
LAMA3-203ENST00000399516 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
LAMA3-203ENST00000399516 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
LAMA3-203ENST00000399516 MARCH6O60337 910 aa13.71□□□□□ -0.22
LAMA3-203ENST00000399516 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.22
LAMA3-203ENST00000399516 IPO7O95373 1038 aaKnown RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 ARGLU1Q9NWB6 273 aaPredicted RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 MRE11P49959 708 aa13.7□□□□□ -0.22
LAMA3-203ENST00000399516 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
LAMA3-203ENST00000399516 NGDNQ8NEJ9 315 aaKnown RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 ELL2O00472 640 aaPredicted RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
LAMA3-203ENST00000399516 ANKRD20A12PQ8NF67 263 aa13.7□□□□□ -0.22
LAMA3-203ENST00000399516 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
LAMA3-203ENST00000399516 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
LAMA3-203ENST00000399516 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
LAMA3-203ENST00000399516 APAF1O14727 1248 aa13.69□□□□□ -0.22
LAMA3-203ENST00000399516 COG3Q96JB2 828 aa13.69□□□□□ -0.22
LAMA3-203ENST00000399516 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
LAMA3-203ENST00000399516 AAMPQ13685 434 aa13.69□□□□□ -0.22
LAMA3-203ENST00000399516 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
LAMA3-203ENST00000399516 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
LAMA3-203ENST00000399516 NOM1Q5C9Z4 860 aaKnown RBP13.68□□□□□ -0.22
LAMA3-203ENST00000399516 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
LAMA3-203ENST00000399516 TRIM29Q14134 588 aa13.68□□□□□ -0.22
LAMA3-203ENST00000399516 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
LAMA3-203ENST00000399516 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
LAMA3-203ENST00000399516 SYNE3Q6ZMZ3 975 aa13.67□□□□□ -0.22
LAMA3-203ENST00000399516 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
LAMA3-203ENST00000399516 CPLX1O14810 134 aa13.67□□□□□ -0.22
LAMA3-203ENST00000399516 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
LAMA3-203ENST00000399516 API5Q9BZZ5 524 aaKnown RBP13.66□□□□□ -0.22
LAMA3-203ENST00000399516 SASS6Q6UVJ0 657 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
LAMA3-203ENST00000399516 FGD6Q6ZV73 1430 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
LAMA3-203ENST00000399516 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 CDC45O75419 566 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
LAMA3-203ENST00000399516 AK7Q96M32 723 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 ACBD3Q9H3P7 528 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
LAMA3-203ENST00000399516 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
LAMA3-203ENST00000399516 RUSC2Q8N2Y8 1516 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 CCDC73Q6ZRK6 1079 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
LAMA3-203ENST00000399516 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
LAMA3-203ENST00000399516 EID1Q9Y6B2 187 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 RUFY1Q96T51 708 aa13.64□□□□□ -0.23
LAMA3-203ENST00000399516 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
LAMA3-203ENST00000399516 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
LAMA3-203ENST00000399516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
LAMA3-203ENST00000399516 RIPK4P57078 832 aa13.63□□□□□ -0.23
LAMA3-203ENST00000399516 KIF21BO75037 1637 aa13.63□□□□□ -0.23
LAMA3-203ENST00000399516 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
LAMA3-203ENST00000399516 DIAPH1O60610 1272 aaKnown RBP13.63□□□□□ -0.23
LAMA3-203ENST00000399516 HSP90B2PQ58FF3 399 aa13.62□□□□□ -0.23
LAMA3-203ENST00000399516 MIA2Q96PC5 1412 aa13.62□□□□□ -0.23
LAMA3-203ENST00000399516 CWC15Q9P013 229 aaKnown RBP13.61□□□□□ -0.23
LAMA3-203ENST00000399516 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
LAMA3-203ENST00000399516 ERC2O15083 957 aa13.61□□□□□ -0.23
LAMA3-203ENST00000399516 G3V3G9 751 aa13.61□□□□□ -0.23
LAMA3-203ENST00000399516 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
LAMA3-203ENST00000399516 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
LAMA3-203ENST00000399516 CCDC47Q96A33 483 aaKnown RBP13.61□□□□□ -0.23
LAMA3-203ENST00000399516 FOSBP53539 338 aa13.6□□□□□ -0.23
LAMA3-203ENST00000399516 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
LAMA3-203ENST00000399516 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
LAMA3-203ENST00000399516 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
LAMA3-203ENST00000399516 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
LAMA3-203ENST00000399516 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
LAMA3-203ENST00000399516 TRAK2O60296 914 aa13.59□□□□□ -0.23
LAMA3-203ENST00000399516 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
LAMA3-203ENST00000399516 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
LAMA3-203ENST00000399516 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
LAMA3-203ENST00000399516 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.23
LAMA3-203ENST00000399516 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.23
LAMA3-203ENST00000399516 TEFQ10587 303 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 CDR1P51861 262 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-203ENST00000399516 APPP05067 770 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 CALRP27797 417 aaKnown RBP13.58□□□□□ -0.24
LAMA3-203ENST00000399516 GTF2E1P29083 439 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms