RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 ANP32CO43423 234 aa13.15□□□□□ -0.3
LINC00243-201ENST00000399196 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
LINC00243-201ENST00000399196 SYNMO15061 1565 aa13.15□□□□□ -0.3
LINC00243-201ENST00000399196 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
LINC00243-201ENST00000399196 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
LINC00243-201ENST00000399196 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
LINC00243-201ENST00000399196 NOS1P29475 1434 aa13.13□□□□□ -0.31
LINC00243-201ENST00000399196 ZMYM3Q14202 1370 aa13.13□□□□□ -0.31
LINC00243-201ENST00000399196 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
LINC00243-201ENST00000399196 C3P01024 1663 aa13.13□□□□□ -0.31
LINC00243-201ENST00000399196 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
LINC00243-201ENST00000399196 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
LINC00243-201ENST00000399196 ERVK-7P63135 1459 aa13.12□□□□□ -0.31
LINC00243-201ENST00000399196 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
LINC00243-201ENST00000399196 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
LINC00243-201ENST00000399196 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
LINC00243-201ENST00000399196 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
LINC00243-201ENST00000399196 KIF1BO60333 1816 aa13.11□□□□□ -0.31
LINC00243-201ENST00000399196 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
LINC00243-201ENST00000399196 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
LINC00243-201ENST00000399196 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
LINC00243-201ENST00000399196 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
LINC00243-201ENST00000399196 NEURL4Q96JN8 1562 aa13.09□□□□□ -0.31
LINC00243-201ENST00000399196 LAMC1P11047 1609 aa13.08□□□□□ -0.32
LINC00243-201ENST00000399196 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
LINC00243-201ENST00000399196 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
LINC00243-201ENST00000399196 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
LINC00243-201ENST00000399196 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
LINC00243-201ENST00000399196 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
LINC00243-201ENST00000399196 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
LINC00243-201ENST00000399196 IDI1Q13907 227 aa13.04□□□□□ -0.32
LINC00243-201ENST00000399196 PTPRMP28827 1452 aa13.04□□□□□ -0.32
LINC00243-201ENST00000399196 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
LINC00243-201ENST00000399196 TESK2Q96S53 571 aa13.04□□□□□ -0.32
LINC00243-201ENST00000399196 MYOM2P54296 1465 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 MYO5BQ9ULV0 1848 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 TNRQ92752 1358 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 BCANQ96GW7 911 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
LINC00243-201ENST00000399196 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.32
LINC00243-201ENST00000399196 IQGAP1P46940 1657 aa13.02□□□□□ -0.32
LINC00243-201ENST00000399196 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
LINC00243-201ENST00000399196 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
LINC00243-201ENST00000399196 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
LINC00243-201ENST00000399196 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
LINC00243-201ENST00000399196 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
LINC00243-201ENST00000399196 UBR1Q8IWV7 1749 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 KIAA1210Q9ULL0 1709 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
LINC00243-201ENST00000399196 PPLO60437 1756 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 A2ML1A8K2U0 1454 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 NRXN1Q9ULB1 1477 aa12.98□□□□□ -0.33
LINC00243-201ENST00000399196 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
LINC00243-201ENST00000399196 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
LINC00243-201ENST00000399196 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
LINC00243-201ENST00000399196 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
LINC00243-201ENST00000399196 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
LINC00243-201ENST00000399196 PIK3C2GO75747 1445 aa12.95□□□□□ -0.34
LINC00243-201ENST00000399196 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
LINC00243-201ENST00000399196 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
LINC00243-201ENST00000399196 TMF1P82094 1093 aa12.95□□□□□ -0.34
LINC00243-201ENST00000399196 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
LINC00243-201ENST00000399196 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
LINC00243-201ENST00000399196 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
LINC00243-201ENST00000399196 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
LINC00243-201ENST00000399196 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
LINC00243-201ENST00000399196 ZFYVE9O95405 1425 aa12.92□□□□□ -0.34
LINC00243-201ENST00000399196 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
LINC00243-201ENST00000399196 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
LINC00243-201ENST00000399196 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
LINC00243-201ENST00000399196 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
LINC00243-201ENST00000399196 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
LINC00243-201ENST00000399196 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
LINC00243-201ENST00000399196 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
LINC00243-201ENST00000399196 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00243-201ENST00000399196 MYOM1P52179 1685 aa12.88□□□□□ -0.35
LINC00243-201ENST00000399196 SLIT1O75093 1534 aa12.88□□□□□ -0.35
LINC00243-201ENST00000399196 PANK3Q9H999 370 aa12.88□□□□□ -0.35
LINC00243-201ENST00000399196 LTKP29376 864 aa12.87□□□□□ -0.35
LINC00243-201ENST00000399196 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
LINC00243-201ENST00000399196 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
LINC00243-201ENST00000399196 HDGFP51858 240 aaKnown RBP12.86□□□□□ -0.35
LINC00243-201ENST00000399196 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00243-201ENST00000399196 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
LINC00243-201ENST00000399196 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
LINC00243-201ENST00000399196 THEMISQ8N1K5 641 aaPredicted RBP12.84□□□□□ -0.35
LINC00243-201ENST00000399196 STK26Q9P289 416 aa12.84□□□□□ -0.35
LINC00243-201ENST00000399196 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.35
LINC00243-201ENST00000399196 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
LINC00243-201ENST00000399196 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
LINC00243-201ENST00000399196 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
LINC00243-201ENST00000399196 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms