RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 BCANQ96GW7 911 aa17.12■□□□□ 0.33
SRMP1-201ENST00000398959 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
SRMP1-201ENST00000398959 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
SRMP1-201ENST00000398959 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SRMP1-201ENST00000398959 KCNA6P17658 529 aa17.1■□□□□ 0.33
SRMP1-201ENST00000398959 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
SRMP1-201ENST00000398959 NKTRP30414 1462 aaKnown RBP17.1■□□□□ 0.33
SRMP1-201ENST00000398959 ROCK1Q13464 1354 aa17.09■□□□□ 0.33
SRMP1-201ENST00000398959 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
SRMP1-201ENST00000398959 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.32
SRMP1-201ENST00000398959 PPP1R15AO75807 674 aaPredicted RBP17.08■□□□□ 0.32
SRMP1-201ENST00000398959 PROSER2Q86WR7 435 aaPredicted RBP17.08■□□□□ 0.32
SRMP1-201ENST00000398959 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
SRMP1-201ENST00000398959 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
SRMP1-201ENST00000398959 ITGAEP38570 1179 aa17.06■□□□□ 0.32
SRMP1-201ENST00000398959 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
SRMP1-201ENST00000398959 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
SRMP1-201ENST00000398959 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
SRMP1-201ENST00000398959 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
SRMP1-201ENST00000398959 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
SRMP1-201ENST00000398959 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
SRMP1-201ENST00000398959 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
SRMP1-201ENST00000398959 NUP155O75694 1391 aa17.02■□□□□ 0.32
SRMP1-201ENST00000398959 MSH6P52701 1360 aa17.02■□□□□ 0.32
SRMP1-201ENST00000398959 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
SRMP1-201ENST00000398959 KIF1BO60333 1816 aa17■□□□□ 0.31
SRMP1-201ENST00000398959 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
SRMP1-201ENST00000398959 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
SRMP1-201ENST00000398959 TRPM2O94759 1503 aa16.97■□□□□ 0.31
SRMP1-201ENST00000398959 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
SRMP1-201ENST00000398959 ADAMTS13Q76LX8 1427 aa16.96■□□□□ 0.3
SRMP1-201ENST00000398959 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
SRMP1-201ENST00000398959 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
SRMP1-201ENST00000398959 NRXN3Q9Y4C0 1643 aa16.94■□□□□ 0.3
SRMP1-201ENST00000398959 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
SRMP1-201ENST00000398959 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
SRMP1-201ENST00000398959 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
SRMP1-201ENST00000398959 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
SRMP1-201ENST00000398959 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
SRMP1-201ENST00000398959 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
SRMP1-201ENST00000398959 RGS17Q9UGC6 210 aaPredicted RBP16.9■□□□□ 0.3
SRMP1-201ENST00000398959 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
SRMP1-201ENST00000398959 ZNF326Q5BKZ1 582 aaKnown RBP16.89■□□□□ 0.29
SRMP1-201ENST00000398959 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
SRMP1-201ENST00000398959 ATF3P18847 181 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 JCADQ9P266 1359 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
SRMP1-201ENST00000398959 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
SRMP1-201ENST00000398959 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
SRMP1-201ENST00000398959 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
SRMP1-201ENST00000398959 NAIPQ13075 1403 aa16.86■□□□□ 0.29
SRMP1-201ENST00000398959 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
SRMP1-201ENST00000398959 PPLO60437 1756 aa16.82■□□□□ 0.28
SRMP1-201ENST00000398959 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
SRMP1-201ENST00000398959 NHSL1Q5SYE7 1610 aa16.81■□□□□ 0.28
SRMP1-201ENST00000398959 DCCP43146 1447 aa16.81■□□□□ 0.28
SRMP1-201ENST00000398959 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
SRMP1-201ENST00000398959 METP08581 1390 aa16.79■□□□□ 0.28
SRMP1-201ENST00000398959 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
SRMP1-201ENST00000398959 LRP6O75581 1613 aa16.78■□□□□ 0.28
SRMP1-201ENST00000398959 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
SRMP1-201ENST00000398959 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
SRMP1-201ENST00000398959 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.28
SRMP1-201ENST00000398959 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
SRMP1-201ENST00000398959 MST1RQ04912 1400 aa16.76■□□□□ 0.27
SRMP1-201ENST00000398959 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
SRMP1-201ENST00000398959 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SRMP1-201ENST00000398959 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
SRMP1-201ENST00000398959 IFT172Q9UG01 1749 aa16.72■□□□□ 0.27
SRMP1-201ENST00000398959 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
SRMP1-201ENST00000398959 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
SRMP1-201ENST00000398959 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
SRMP1-201ENST00000398959 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
SRMP1-201ENST00000398959 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
SRMP1-201ENST00000398959 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
SRMP1-201ENST00000398959 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
SRMP1-201ENST00000398959 LAMC1P11047 1609 aa16.68■□□□□ 0.26
SRMP1-201ENST00000398959 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
SRMP1-201ENST00000398959 FOXD1Q16676 465 aa16.66■□□□□ 0.26
SRMP1-201ENST00000398959 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
SRMP1-201ENST00000398959 ROBO2Q9HCK4 1378 aa16.65■□□□□ 0.26
SRMP1-201ENST00000398959 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
SRMP1-201ENST00000398959 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
SRMP1-201ENST00000398959 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
SRMP1-201ENST00000398959 KNDC1Q76NI1 1749 aa16.64■□□□□ 0.25
SRMP1-201ENST00000398959 PNPLA6Q8IY17 1366 aa16.63■□□□□ 0.25
SRMP1-201ENST00000398959 CDC42BPGQ6DT37 1551 aa16.62■□□□□ 0.25
SRMP1-201ENST00000398959 AFF2P51816 1311 aa16.62■□□□□ 0.25
SRMP1-201ENST00000398959 MARF1Q9Y4F3 1742 aaKnown RBP16.62■□□□□ 0.25
SRMP1-201ENST00000398959 RXRBP28702 533 aa16.61■□□□□ 0.25
SRMP1-201ENST00000398959 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
SRMP1-201ENST00000398959 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
SRMP1-201ENST00000398959 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
SRMP1-201ENST00000398959 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
SRMP1-201ENST00000398959 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
SRMP1-201ENST00000398959 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
SRMP1-201ENST00000398959 RGPD8O14715 1765 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms