RNA–Protein interactions for RNA: ENST00000398898.6

USP19-205, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP19, Length 4,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-205ENST00000398898 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
USP19-205ENST00000398898 STK26Q9P289 416 aa18.34■□□□□ 0.53
USP19-205ENST00000398898 HDAC5Q9UQL6 1122 aa18.34■□□□□ 0.53
USP19-205ENST00000398898 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
USP19-205ENST00000398898 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
USP19-205ENST00000398898 FAM13BQ9NYF5 915 aa18.33■□□□□ 0.53
USP19-205ENST00000398898 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
USP19-205ENST00000398898 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.52
USP19-205ENST00000398898 CCDC173Q0VFZ6 552 aa18.32■□□□□ 0.52
USP19-205ENST00000398898 GGT6Q6P531 493 aa18.32■□□□□ 0.52
USP19-205ENST00000398898 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
USP19-205ENST00000398898 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
USP19-205ENST00000398898 RRP9O43818 475 aaKnown RBP18.31■□□□□ 0.52
USP19-205ENST00000398898 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
USP19-205ENST00000398898 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
USP19-205ENST00000398898 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
USP19-205ENST00000398898 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
USP19-205ENST00000398898 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
USP19-205ENST00000398898 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
USP19-205ENST00000398898 MCM4P33991 863 aa18.29■□□□□ 0.52
USP19-205ENST00000398898 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
USP19-205ENST00000398898 DAPK1P53355 1430 aa18.29■□□□□ 0.52
USP19-205ENST00000398898 TPM4P67936 248 aa18.29■□□□□ 0.52
USP19-205ENST00000398898 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
USP19-205ENST00000398898 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
USP19-205ENST00000398898 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
USP19-205ENST00000398898 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
USP19-205ENST00000398898 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
USP19-205ENST00000398898 HECW1Q76N89 1606 aa18.27■□□□□ 0.52
USP19-205ENST00000398898 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
USP19-205ENST00000398898 CDC45O75419 566 aa18.27■□□□□ 0.52
USP19-205ENST00000398898 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
USP19-205ENST00000398898 PKNOX2Q96KN3 472 aa18.26■□□□□ 0.51
USP19-205ENST00000398898 ESPNB1AK53 854 aa18.26■□□□□ 0.51
USP19-205ENST00000398898 MBD3O95983 291 aa18.25■□□□□ 0.51
USP19-205ENST00000398898 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
USP19-205ENST00000398898 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
USP19-205ENST00000398898 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
USP19-205ENST00000398898 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
USP19-205ENST00000398898 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
USP19-205ENST00000398898 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
USP19-205ENST00000398898 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
USP19-205ENST00000398898 DIAPH1O60610 1272 aaKnown RBP18.23■□□□□ 0.51
USP19-205ENST00000398898 RIPK4P57078 832 aa18.23■□□□□ 0.51
USP19-205ENST00000398898 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
USP19-205ENST00000398898 BCAR3O75815 825 aa18.23■□□□□ 0.51
USP19-205ENST00000398898 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
USP19-205ENST00000398898 R3HCC1Q9Y3T6 440 aaKnown RBP18.23■□□□□ 0.51
USP19-205ENST00000398898 PTPRGP23470 1445 aa18.23■□□□□ 0.51
USP19-205ENST00000398898 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
USP19-205ENST00000398898 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
USP19-205ENST00000398898 WDR63Q8IWG1 891 aa18.22■□□□□ 0.51
USP19-205ENST00000398898 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
USP19-205ENST00000398898 RABEP1Q15276 862 aa18.21■□□□□ 0.51
USP19-205ENST00000398898 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
USP19-205ENST00000398898 DIAPH3Q9NSV4 1193 aa18.21■□□□□ 0.51
USP19-205ENST00000398898 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
USP19-205ENST00000398898 TNNT3P45378 269 aaPredicted RBP18.2■□□□□ 0.5
USP19-205ENST00000398898 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
USP19-205ENST00000398898 GNAI1P63096 354 aa18.2■□□□□ 0.5
USP19-205ENST00000398898 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
USP19-205ENST00000398898 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
USP19-205ENST00000398898 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
USP19-205ENST00000398898 TPM3P06753 285 aa18.19■□□□□ 0.5
USP19-205ENST00000398898 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
USP19-205ENST00000398898 MCM2P49736 904 aa18.18■□□□□ 0.5
USP19-205ENST00000398898 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
USP19-205ENST00000398898 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
USP19-205ENST00000398898 RILPL2Q969X0 211 aa18.17■□□□□ 0.5
USP19-205ENST00000398898 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
USP19-205ENST00000398898 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
USP19-205ENST00000398898 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
USP19-205ENST00000398898 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
USP19-205ENST00000398898 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
USP19-205ENST00000398898 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
USP19-205ENST00000398898 CAVIN1Q6NZI2 390 aaKnown RBP18.16■□□□□ 0.5
USP19-205ENST00000398898 RUFY2Q8WXA3 655 aa18.15■□□□□ 0.5
USP19-205ENST00000398898 MTHFSP49914 203 aa18.15■□□□□ 0.5
USP19-205ENST00000398898 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
USP19-205ENST00000398898 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
USP19-205ENST00000398898 SOX12O15370 315 aa18.14■□□□□ 0.5
USP19-205ENST00000398898 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.5
USP19-205ENST00000398898 GNL2Q13823 731 aaKnown RBP18.14■□□□□ 0.5
USP19-205ENST00000398898 CCDC34Q96HJ3 373 aa18.14■□□□□ 0.5
USP19-205ENST00000398898 ZNF771Q7L3S4 317 aaPredicted RBP18.13■□□□□ 0.49
USP19-205ENST00000398898 UBE2Q2Q8WVN8 375 aa18.13■□□□□ 0.49
USP19-205ENST00000398898 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
USP19-205ENST00000398898 BECN2A8MW95 431 aa18.13■□□□□ 0.49
USP19-205ENST00000398898 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
USP19-205ENST00000398898 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
USP19-205ENST00000398898 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
USP19-205ENST00000398898 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
USP19-205ENST00000398898 NKTRP30414 1462 aaKnown RBP18.11■□□□□ 0.49
USP19-205ENST00000398898 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
USP19-205ENST00000398898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
USP19-205ENST00000398898 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
USP19-205ENST00000398898 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
USP19-205ENST00000398898 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
USP19-205ENST00000398898 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
USP19-205ENST00000398898 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms