RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
HMGCLL1-205ENST00000398661 ABCC3O15438 1527 aa13.55□□□□□ -0.24
HMGCLL1-205ENST00000398661 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
HMGCLL1-205ENST00000398661 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
HMGCLL1-205ENST00000398661 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
HMGCLL1-205ENST00000398661 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.24
HMGCLL1-205ENST00000398661 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.24
HMGCLL1-205ENST00000398661 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
HMGCLL1-205ENST00000398661 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.25
HMGCLL1-205ENST00000398661 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
HMGCLL1-205ENST00000398661 EIF2AK4Q9P2K8 1649 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-205ENST00000398661 TET3O43151 1660 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 PTPRTO14522 1441 aa13.5□□□□□ -0.25
HMGCLL1-205ENST00000398661 RNF17Q9BXT8 1623 aaKnown RBP13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 SPATA31E1Q6ZUB1 1445 aa13.49□□□□□ -0.25
HMGCLL1-205ENST00000398661 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 SPHKAPQ2M3C7 1700 aa13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 ROCK2O75116 1388 aaKnown RBP13.48□□□□□ -0.25
HMGCLL1-205ENST00000398661 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
HMGCLL1-205ENST00000398661 TRPM2O94759 1503 aa13.46□□□□□ -0.25
HMGCLL1-205ENST00000398661 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.25
HMGCLL1-205ENST00000398661 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMGCLL1-205ENST00000398661 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
HMGCLL1-205ENST00000398661 NOS1P29475 1434 aa13.45□□□□□ -0.26
HMGCLL1-205ENST00000398661 USP47Q96K76 1375 aa13.44□□□□□ -0.26
HMGCLL1-205ENST00000398661 SYNMO15061 1565 aa13.44□□□□□ -0.26
HMGCLL1-205ENST00000398661 GSE1Q14687 1217 aa13.44□□□□□ -0.26
HMGCLL1-205ENST00000398661 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
HMGCLL1-205ENST00000398661 STK26Q9P289 416 aa13.43□□□□□ -0.26
HMGCLL1-205ENST00000398661 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
HMGCLL1-205ENST00000398661 LMTK2Q8IWU2 1503 aa13.42□□□□□ -0.26
HMGCLL1-205ENST00000398661 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
HMGCLL1-205ENST00000398661 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
HMGCLL1-205ENST00000398661 PDE4AP27815 886 aa13.4□□□□□ -0.26
HMGCLL1-205ENST00000398661 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
HMGCLL1-205ENST00000398661 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
HMGCLL1-205ENST00000398661 AGLP35573 1532 aa13.39□□□□□ -0.27
HMGCLL1-205ENST00000398661 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
HMGCLL1-205ENST00000398661 ERVK-7P63135 1459 aa13.39□□□□□ -0.27
HMGCLL1-205ENST00000398661 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
HMGCLL1-205ENST00000398661 BCORL1Q5H9F3 1711 aa13.38□□□□□ -0.27
HMGCLL1-205ENST00000398661 BACH2Q9BYV9 841 aa13.38□□□□□ -0.27
HMGCLL1-205ENST00000398661 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
HMGCLL1-205ENST00000398661 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
HMGCLL1-205ENST00000398661 PREX1Q8TCU6 1659 aa13.36□□□□□ -0.27
HMGCLL1-205ENST00000398661 UHRF1BP1Q6BDS2 1440 aa13.36□□□□□ -0.27
HMGCLL1-205ENST00000398661 FRAT1Q92837 279 aaPredicted RBP13.36□□□□□ -0.27
HMGCLL1-205ENST00000398661 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
HMGCLL1-205ENST00000398661 MS4A1P11836 297 aa13.35□□□□□ -0.27
HMGCLL1-205ENST00000398661 KIF1BO60333 1816 aa13.35□□□□□ -0.27
HMGCLL1-205ENST00000398661 REREQ9P2R6 1566 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 LTKP29376 864 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 TNRQ92752 1358 aa13.34□□□□□ -0.27
HMGCLL1-205ENST00000398661 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
HMGCLL1-205ENST00000398661 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
HMGCLL1-205ENST00000398661 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
HMGCLL1-205ENST00000398661 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
HMGCLL1-205ENST00000398661 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
HMGCLL1-205ENST00000398661 TESK2Q96S53 571 aa13.32□□□□□ -0.28
HMGCLL1-205ENST00000398661 DISP3Q9P2K9 1392 aa13.31□□□□□ -0.28
HMGCLL1-205ENST00000398661 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
HMGCLL1-205ENST00000398661 TRPM1Q7Z4N2 1603 aa13.31□□□□□ -0.28
HMGCLL1-205ENST00000398661 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
HMGCLL1-205ENST00000398661 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
HMGCLL1-205ENST00000398661 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
HMGCLL1-205ENST00000398661 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
HMGCLL1-205ENST00000398661 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
HMGCLL1-205ENST00000398661 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
HMGCLL1-205ENST00000398661 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
HMGCLL1-205ENST00000398661 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
HMGCLL1-205ENST00000398661 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
HMGCLL1-205ENST00000398661 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
HMGCLL1-205ENST00000398661 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
HMGCLL1-205ENST00000398661 NEXMIFQ5QGS0 1516 aa13.27□□□□□ -0.28
HMGCLL1-205ENST00000398661 PIK3C2GO75747 1445 aa13.27□□□□□ -0.29
HMGCLL1-205ENST00000398661 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.29
HMGCLL1-205ENST00000398661 HSPA2P54652 639 aa13.27□□□□□ -0.29
HMGCLL1-205ENST00000398661 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
HMGCLL1-205ENST00000398661 SPATA31D1Q6ZQQ2 1576 aa13.26□□□□□ -0.29
HMGCLL1-205ENST00000398661 C3P01024 1663 aa13.26□□□□□ -0.29
HMGCLL1-205ENST00000398661 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms