RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 SLKQ9H2G2 1235 aaPredicted RBP13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 HSP90AB2PQ58FF8 381 aa13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 AK7Q96M32 723 aa13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 MFAP1P55081 439 aaKnown RBP13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 GBP4Q96PP9 640 aa13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 NUP155O75694 1391 aa13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 CCDC70Q6NSX1 233 aa13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 CLUAP1Q96AJ1 413 aa13.97□□□□□ -0.17
SLC38A1-201ENST00000398637 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
SLC38A1-201ENST00000398637 RIC3Q7Z5B4 369 aa13.96□□□□□ -0.17
SLC38A1-201ENST00000398637 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
SLC38A1-201ENST00000398637 GZF1Q9H116 711 aaPredicted RBP13.96□□□□□ -0.17
SLC38A1-201ENST00000398637 IPO7O95373 1038 aaKnown RBP13.96□□□□□ -0.17
SLC38A1-201ENST00000398637 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.18
SLC38A1-201ENST00000398637 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.18
SLC38A1-201ENST00000398637 ESCO1Q5FWF5 840 aa13.96□□□□□ -0.18
SLC38A1-201ENST00000398637 DIAPH3Q9NSV4 1193 aa13.96□□□□□ -0.18
SLC38A1-201ENST00000398637 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
SLC38A1-201ENST00000398637 IFIT2P09913 472 aaKnown RBP13.95□□□□□ -0.18
SLC38A1-201ENST00000398637 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-201ENST00000398637 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-201ENST00000398637 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
SLC38A1-201ENST00000398637 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 KDM4AO75164 1064 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 MATR3P43243 847 aaKnown RBP eCLIP13.94□□□□□ -0.183e-7■■■■□ 19.8
SLC38A1-201ENST00000398637 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 MIER1Q8N108 512 aa13.94□□□□□ -0.18
SLC38A1-201ENST00000398637 FOSBP53539 338 aa13.93□□□□□ -0.18
SLC38A1-201ENST00000398637 WASHC4Q2M389 1173 aa13.93□□□□□ -0.18
SLC38A1-201ENST00000398637 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.18
SLC38A1-201ENST00000398637 NEBLO76041 1014 aa13.92□□□□□ -0.18
SLC38A1-201ENST00000398637 DDX54Q8TDD1 881 aaKnown RBP13.92□□□□□ -0.18
SLC38A1-201ENST00000398637 CUX2O14529 1486 aa13.91□□□□□ -0.18
SLC38A1-201ENST00000398637 GOLGA6L19H0YKK7 550 aa13.91□□□□□ -0.18
SLC38A1-201ENST00000398637 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
SLC38A1-201ENST00000398637 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
SLC38A1-201ENST00000398637 TNNT3P45378 269 aaPredicted RBP13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 BRMS1Q9HCU9 246 aa13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 HOOK1Q9UJC3 728 aaKnown RBP13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 ST18O60284 1047 aa13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 OFD1O75665 1012 aa13.9□□□□□ -0.18
SLC38A1-201ENST00000398637 SLC3A2P08195 630 aaKnown RBP13.89□□□□□ -0.19
SLC38A1-201ENST00000398637 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
SLC38A1-201ENST00000398637 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
SLC38A1-201ENST00000398637 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
SLC38A1-201ENST00000398637 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
SLC38A1-201ENST00000398637 BECN2A8MW95 431 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 PTMSP20962 102 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 CDK5RAP3Q96JB5 506 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 ANO2Q9NQ90 1003 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
SLC38A1-201ENST00000398637 KRT18P05783 430 aaKnown RBP13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 SYCP1Q15431 976 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 RALYLQ86SE5 291 aaKnown RBP13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 ABTB2Q8N961 1025 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
SLC38A1-201ENST00000398637 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
SLC38A1-201ENST00000398637 PHF14O94880 888 aa13.86□□□□□ -0.19
SLC38A1-201ENST00000398637 STK11IPQ8N1F8 1099 aa13.86□□□□□ -0.19
SLC38A1-201ENST00000398637 RUFY2Q8WXA3 655 aa13.86□□□□□ -0.19
SLC38A1-201ENST00000398637 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
SLC38A1-201ENST00000398637 TRIM21P19474 475 aaKnown RBP13.85□□□□□ -0.19
SLC38A1-201ENST00000398637 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
SLC38A1-201ENST00000398637 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
SLC38A1-201ENST00000398637 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
SLC38A1-201ENST00000398637 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 XBP1P17861 261 aa13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 SETQ01105 290 aaPredicted RBP13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 HSP90AB4PQ58FF6 505 aa13.84□□□□□ -0.19
SLC38A1-201ENST00000398637 ZKSCAN1P17029 563 aaPredicted RBP13.83□□□□□ -0.19
SLC38A1-201ENST00000398637 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.19
SLC38A1-201ENST00000398637 HOMER1Q86YM7 354 aa13.83□□□□□ -0.19
SLC38A1-201ENST00000398637 VTI1AQ96AJ9 217 aa13.83□□□□□ -0.2
SLC38A1-201ENST00000398637 EEA1Q15075 1411 aa13.83□□□□□ -0.2
SLC38A1-201ENST00000398637 ADAMTS2O95450 1211 aa13.82□□□□□ -0.2
SLC38A1-201ENST00000398637 RFX1P22670 979 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 NLRP6P59044 892 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-201ENST00000398637 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 SART3Q15020 963 aaKnown RBP13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms