RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 CCDC141Q6ZP82 1450 aa13.47□□□□□ -0.25
PCDHGA10-201ENST00000398610 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
PCDHGA10-201ENST00000398610 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
PCDHGA10-201ENST00000398610 PDE4CQ08493 712 aa13.46□□□□□ -0.26
PCDHGA10-201ENST00000398610 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA10-201ENST00000398610 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 ABCA8O94911 1581 aa13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 MINK1Q8N4C8 1332 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
PCDHGA10-201ENST00000398610 AMPHP49418 695 aa13.43□□□□□ -0.26
PCDHGA10-201ENST00000398610 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
PCDHGA10-201ENST00000398610 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
PCDHGA10-201ENST00000398610 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
PCDHGA10-201ENST00000398610 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
PCDHGA10-201ENST00000398610 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
PCDHGA10-201ENST00000398610 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA10-201ENST00000398610 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
PCDHGA10-201ENST00000398610 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
PCDHGA10-201ENST00000398610 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
PCDHGA10-201ENST00000398610 RALBP1Q15311 655 aa13.4□□□□□ -0.26
PCDHGA10-201ENST00000398610 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
PCDHGA10-201ENST00000398610 SYCP2Q9BX26 1530 aa13.4□□□□□ -0.26
PCDHGA10-201ENST00000398610 PANK3Q9H999 370 aa13.4□□□□□ -0.26
PCDHGA10-201ENST00000398610 CHMP3Q9Y3E7 222 aa13.4□□□□□ -0.26
PCDHGA10-201ENST00000398610 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.27
PCDHGA10-201ENST00000398610 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
PCDHGA10-201ENST00000398610 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
PCDHGA10-201ENST00000398610 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
PCDHGA10-201ENST00000398610 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
PCDHGA10-201ENST00000398610 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
PCDHGA10-201ENST00000398610 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
PCDHGA10-201ENST00000398610 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
PCDHGA10-201ENST00000398610 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
PCDHGA10-201ENST00000398610 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
PCDHGA10-201ENST00000398610 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
PCDHGA10-201ENST00000398610 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
PCDHGA10-201ENST00000398610 MBD5Q9P267 1494 aa13.35□□□□□ -0.27
PCDHGA10-201ENST00000398610 MS4A1P11836 297 aa13.35□□□□□ -0.27
PCDHGA10-201ENST00000398610 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
PCDHGA10-201ENST00000398610 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
PCDHGA10-201ENST00000398610 PNISRQ8TF01 805 aaKnown RBP13.35□□□□□ -0.27
PCDHGA10-201ENST00000398610 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
PCDHGA10-201ENST00000398610 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
PCDHGA10-201ENST00000398610 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 PLIN1O60240 522 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 SAMD9LQ8IVG5 1584 aa13.33□□□□□ -0.28
PCDHGA10-201ENST00000398610 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
PCDHGA10-201ENST00000398610 IPO8O15397 1037 aaKnown RBP13.32□□□□□ -0.28
PCDHGA10-201ENST00000398610 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
PCDHGA10-201ENST00000398610 CHD1O14646 1710 aa13.31□□□□□ -0.28
PCDHGA10-201ENST00000398610 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
PCDHGA10-201ENST00000398610 SLKQ9H2G2 1235 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA10-201ENST00000398610 VGFO15240 615 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA10-201ENST00000398610 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
PCDHGA10-201ENST00000398610 TTC37Q6PGP7 1564 aa13.29□□□□□ -0.28
PCDHGA10-201ENST00000398610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHGA10-201ENST00000398610 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
PCDHGA10-201ENST00000398610 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 APAF1O14727 1248 aa13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 NRDCO43847 1150 aa13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 PLCH2O75038 1416 aa13.28□□□□□ -0.28
PCDHGA10-201ENST00000398610 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.28
PCDHGA10-201ENST00000398610 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.28
PCDHGA10-201ENST00000398610 TRAPPC8Q9Y2L5 1435 aa13.27□□□□□ -0.28
PCDHGA10-201ENST00000398610 KDM5CP41229 1560 aa13.27□□□□□ -0.28
PCDHGA10-201ENST00000398610 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
PCDHGA10-201ENST00000398610 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 BCORL1Q5H9F3 1711 aa13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 ERBINQ96RT1 1412 aa13.26□□□□□ -0.29
PCDHGA10-201ENST00000398610 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 COG3Q96JB2 828 aa13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 EVA1CP58658 441 aa13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 GGNBP2Q9H3C7 697 aa13.25□□□□□ -0.29
PCDHGA10-201ENST00000398610 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 KIAA1211Q6ZU35 1233 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 A2MP01023 1474 aa13.24□□□□□ -0.29
PCDHGA10-201ENST00000398610 EIF3AQ14152 1382 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms