RNA–Protein interactions for RNA: ENST00000398411.5

CST3-203, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 3,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-203ENST00000398411 HSP90AA2PQ14568 343 aaPredicted RBP16.45■□□□□ 0.22
CST3-203ENST00000398411 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
CST3-203ENST00000398411 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
CST3-203ENST00000398411 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
CST3-203ENST00000398411 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
CST3-203ENST00000398411 TESK2Q96S53 571 aa16.43■□□□□ 0.22
CST3-203ENST00000398411 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
CST3-203ENST00000398411 SLFN5Q08AF3 891 aa16.42■□□□□ 0.22
CST3-203ENST00000398411 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
CST3-203ENST00000398411 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
CST3-203ENST00000398411 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
CST3-203ENST00000398411 USP19O94966 1318 aa16.4■□□□□ 0.22
CST3-203ENST00000398411 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
CST3-203ENST00000398411 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CST3-203ENST00000398411 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
CST3-203ENST00000398411 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
CST3-203ENST00000398411 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
CST3-203ENST00000398411 KDM5CP41229 1560 aa16.39■□□□□ 0.22
CST3-203ENST00000398411 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
CST3-203ENST00000398411 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
CST3-203ENST00000398411 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
CST3-203ENST00000398411 RLBP1P12271 317 aa16.38■□□□□ 0.21
CST3-203ENST00000398411 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
CST3-203ENST00000398411 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
CST3-203ENST00000398411 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
CST3-203ENST00000398411 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
CST3-203ENST00000398411 TRIM44Q96DX7 344 aaPredicted RBP16.37■□□□□ 0.21
CST3-203ENST00000398411 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
CST3-203ENST00000398411 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
CST3-203ENST00000398411 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
CST3-203ENST00000398411 PTPRGP23470 1445 aa16.35■□□□□ 0.21
CST3-203ENST00000398411 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
CST3-203ENST00000398411 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
CST3-203ENST00000398411 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.21
CST3-203ENST00000398411 E9PSI1 815 aa16.33■□□□□ 0.2
CST3-203ENST00000398411 TRAK2O60296 914 aa16.33■□□□□ 0.2
CST3-203ENST00000398411 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.2
CST3-203ENST00000398411 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
CST3-203ENST00000398411 PREX2Q70Z35 1606 aa16.32■□□□□ 0.2
CST3-203ENST00000398411 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
CST3-203ENST00000398411 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
CST3-203ENST00000398411 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
CST3-203ENST00000398411 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
CST3-203ENST00000398411 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
CST3-203ENST00000398411 MCM4P33991 863 aa16.31■□□□□ 0.2
CST3-203ENST00000398411 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
CST3-203ENST00000398411 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
CST3-203ENST00000398411 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
CST3-203ENST00000398411 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
CST3-203ENST00000398411 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
CST3-203ENST00000398411 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
CST3-203ENST00000398411 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
CST3-203ENST00000398411 C22orf23Q9BZE7 217 aa16.3■□□□□ 0.2
CST3-203ENST00000398411 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
CST3-203ENST00000398411 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
CST3-203ENST00000398411 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
CST3-203ENST00000398411 APBB1O00213 710 aa16.29■□□□□ 0.2
CST3-203ENST00000398411 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
CST3-203ENST00000398411 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
CST3-203ENST00000398411 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
CST3-203ENST00000398411 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
CST3-203ENST00000398411 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
CST3-203ENST00000398411 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
CST3-203ENST00000398411 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
CST3-203ENST00000398411 PRAG1Q86YV5 1406 aa16.27■□□□□ 0.2
CST3-203ENST00000398411 UHRF1BP1LA0JNW5 1464 aa16.27■□□□□ 0.2
CST3-203ENST00000398411 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.2
CST3-203ENST00000398411 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.19
CST3-203ENST00000398411 ANTXR1Q9H6X2 564 aa16.26■□□□□ 0.19
CST3-203ENST00000398411 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
CST3-203ENST00000398411 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
CST3-203ENST00000398411 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
CST3-203ENST00000398411 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
CST3-203ENST00000398411 BLMP54132 1417 aaPredicted RBP16.24■□□□□ 0.19
CST3-203ENST00000398411 ESPNB1AK53 854 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
CST3-203ENST00000398411 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 MTHFSP49914 203 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 GAS2L3Q86XJ1 694 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 MPNDQ8N594 471 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
CST3-203ENST00000398411 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
CST3-203ENST00000398411 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
CST3-203ENST00000398411 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
CST3-203ENST00000398411 MYO5CQ9NQX4 1742 aa16.22■□□□□ 0.19
CST3-203ENST00000398411 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
CST3-203ENST00000398411 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
CST3-203ENST00000398411 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
CST3-203ENST00000398411 ZCCHC11Q5TAX3 1644 aaKnown RBP16.21■□□□□ 0.19
CST3-203ENST00000398411 ZMYM4Q5VZL5 1548 aa16.21■□□□□ 0.19
CST3-203ENST00000398411 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
CST3-203ENST00000398411 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
CST3-203ENST00000398411 MAST1Q9Y2H9 1570 aa16.21■□□□□ 0.19
CST3-203ENST00000398411 CHMP5Q9NZZ3 219 aa16.21■□□□□ 0.19
CST3-203ENST00000398411 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
CST3-203ENST00000398411 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
CST3-203ENST00000398411 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
CST3-203ENST00000398411 CLCN1P35523 988 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms