RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PRR20BP86481 221 aa8.04□□□□□ -1.12
CD47-203ENST00000398258 PRR20AP86496 221 aa8.04□□□□□ -1.12
CD47-203ENST00000398258 FAM187AA6NFU0 413 aa8.03□□□□□ -1.12
CD47-203ENST00000398258 TTC13Q8NBP0 860 aa8.03□□□□□ -1.12
CD47-203ENST00000398258 TLL1O43897 1013 aa8.02□□□□□ -1.13
CD47-203ENST00000398258 SLC19A1P41440 591 aa8.02□□□□□ -1.13
CD47-203ENST00000398258 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
CD47-203ENST00000398258 PPEF1O14829 653 aaPredicted RBP8.01□□□□□ -1.13
CD47-203ENST00000398258 OSBPP22059 807 aa8.01□□□□□ -1.13
CD47-203ENST00000398258 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
CD47-203ENST00000398258 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
CD47-203ENST00000398258 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
CD47-203ENST00000398258 NPDC1Q9NQX5 325 aaPredicted RBP8□□□□□ -1.13
CD47-203ENST00000398258 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
CD47-203ENST00000398258 GDF9O60383 454 aa7.99□□□□□ -1.13
CD47-203ENST00000398258 GGCXP38435 758 aa7.99□□□□□ -1.13
CD47-203ENST00000398258 BLOC1S3Q6QNY0 202 aa7.99□□□□□ -1.13
CD47-203ENST00000398258 CERKQ8TCT0 537 aa7.99□□□□□ -1.13
CD47-203ENST00000398258 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
CD47-203ENST00000398258 PADI6Q6TGC4 694 aa7.98□□□□□ -1.13
CD47-203ENST00000398258 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
CD47-203ENST00000398258 SPDYE16A6NNV3 312 aaPredicted RBP7.97□□□□□ -1.13
CD47-203ENST00000398258 TNFRSF10AO00220 468 aa7.97□□□□□ -1.13
CD47-203ENST00000398258 PLA2G2CQ5R387 149 aa7.97□□□□□ -1.13
CD47-203ENST00000398258 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
CD47-203ENST00000398258 RBM27Q9P2N5 1060 aaKnown RBP7.97□□□□□ -1.13
CD47-203ENST00000398258 TERTO14746 1132 aaKnown RBP7.96□□□□□ -1.14
CD47-203ENST00000398258 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.14
CD47-203ENST00000398258 EYA1Q99502 592 aa7.96□□□□□ -1.14
CD47-203ENST00000398258 S1PR4O95977 384 aa7.95□□□□□ -1.14
CD47-203ENST00000398258 ZNF697Q5TEC3 545 aa7.94□□□□□ -1.14
CD47-203ENST00000398258 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
CD47-203ENST00000398258 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
CD47-203ENST00000398258 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
CD47-203ENST00000398258 CRIPAKQ8N1N5 446 aa7.93□□□□□ -1.14
CD47-203ENST00000398258 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
CD47-203ENST00000398258 ANKLE1Q8NAG6 615 aa7.92□□□□□ -1.14
CD47-203ENST00000398258 ARIH1Q9Y4X5 557 aaPredicted RBP7.91□□□□□ -1.14
CD47-203ENST00000398258 GSK3AP49840 483 aa7.9□□□□□ -1.14
CD47-203ENST00000398258 PKD2L1Q9P0L9 805 aa7.9□□□□□ -1.14
CD47-203ENST00000398258 DCAF8L2P0C7V8 631 aa7.89□□□□□ -1.15
CD47-203ENST00000398258 E2F4Q16254 413 aa7.87□□□□□ -1.15
CD47-203ENST00000398258 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
CD47-203ENST00000398258 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
CD47-203ENST00000398258 ACTN4O43707 911 aaKnown RBP7.84□□□□□ -1.15
CD47-203ENST00000398258 ADH1BP00325 375 aa7.83□□□□□ -1.16
CD47-203ENST00000398258 SLC10A3P09131 477 aa7.83□□□□□ -1.16
CD47-203ENST00000398258 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
CD47-203ENST00000398258 GMPRP36959 345 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 FOXC1Q12948 553 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 FAM161AQ3B820 660 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
CD47-203ENST00000398258 AVPP01185 164 aa7.81□□□□□ -1.16
CD47-203ENST00000398258 CFHP08603 1231 aa7.81□□□□□ -1.16
CD47-203ENST00000398258 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
CD47-203ENST00000398258 DNAJB2P25686 324 aa7.79□□□□□ -1.16
CD47-203ENST00000398258 SLC6A16Q9GZN6 736 aa7.79□□□□□ -1.16
CD47-203ENST00000398258 ADGRG1Q9Y653 693 aa7.79□□□□□ -1.16
CD47-203ENST00000398258 AXIN1O15169 862 aa7.78□□□□□ -1.16
CD47-203ENST00000398258 MLLT3P42568 568 aaPredicted RBP7.78□□□□□ -1.16
CD47-203ENST00000398258 RCCD1A6NED2 376 aa7.77□□□□□ -1.17
CD47-203ENST00000398258 PUS10Q3MIT2 529 aaKnown RBP7.77□□□□□ -1.17
CD47-203ENST00000398258 PTGDRQ13258 359 aa7.76□□□□□ -1.17
CD47-203ENST00000398258 SCUBE3Q8IX30 993 aa7.76□□□□□ -1.17
CD47-203ENST00000398258 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
CD47-203ENST00000398258 KMT5BQ4FZB7 885 aa7.75□□□□□ -1.17
CD47-203ENST00000398258 NR1I2O75469 434 aa7.73□□□□□ -1.17
CD47-203ENST00000398258 SMCPP49901 116 aaPredicted RBP7.73□□□□□ -1.17
CD47-203ENST00000398258 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
CD47-203ENST00000398258 LMOD2Q6P5Q4 547 aa7.72□□□□□ -1.17
CD47-203ENST00000398258 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
CD47-203ENST00000398258 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
CD47-203ENST00000398258 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
CD47-203ENST00000398258 SPSB2Q99619 263 aa7.71□□□□□ -1.18
CD47-203ENST00000398258 FCF1Q9Y324 198 aaKnown RBP7.71□□□□□ -1.18
CD47-203ENST00000398258 TMEM151AQ8N4L1 468 aa7.7□□□□□ -1.18
CD47-203ENST00000398258 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
CD47-203ENST00000398258 THAP11Q96EK4 314 aa7.7□□□□□ -1.18
CD47-203ENST00000398258 PRDM9Q9NQV7 894 aa7.7□□□□□ -1.18
CD47-203ENST00000398258 RPIAP49247 311 aa7.69□□□□□ -1.18
CD47-203ENST00000398258 TRIM47Q96LD4 638 aa7.69□□□□□ -1.18
CD47-203ENST00000398258 KRTAP9-9Q9BYP9 154 aa7.69□□□□□ -1.18
CD47-203ENST00000398258 KRTAP9-4Q9BYQ2 154 aa7.69□□□□□ -1.18
CD47-203ENST00000398258 SMPD1P17405 629 aa7.68□□□□□ -1.18
CD47-203ENST00000398258 CYP4X1Q8N118 509 aa7.68□□□□□ -1.18
CD47-203ENST00000398258 SLC16A10Q8TF71 515 aa7.68□□□□□ -1.18
CD47-203ENST00000398258 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
CD47-203ENST00000398258 WDR70Q9NW82 654 aa7.67□□□□□ -1.18
CD47-203ENST00000398258 GDF11O95390 407 aa7.66□□□□□ -1.18
CD47-203ENST00000398258 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
CD47-203ENST00000398258 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
CD47-203ENST00000398258 MORN1Q5T089 497 aa7.65□□□□□ -1.18
CD47-203ENST00000398258 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
CD47-203ENST00000398258 J3QL48 77 aa7.64□□□□□ -1.19
CD47-203ENST00000398258 RASSF7Q02833 373 aa7.64□□□□□ -1.19
CD47-203ENST00000398258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.63□□□□□ -1.19
CD47-203ENST00000398258 IRF7Q92985 503 aa7.63□□□□□ -1.19
CD47-203ENST00000398258 CD2BP2O95400 341 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms