RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CTTNBP2Q8WZ74 1663 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 PSME1Q06323 249 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 CAMSAP2Q08AD1 1489 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 NLRP6P59044 892 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
IFT140-202ENST00000397417 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
IFT140-202ENST00000397417 PNNQ9H307 717 aaKnown RBP14.21□□□□□ -0.13
IFT140-202ENST00000397417 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
IFT140-202ENST00000397417 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
IFT140-202ENST00000397417 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
IFT140-202ENST00000397417 ANKRD30BQ9BXX2 1392 aa14.2□□□□□ -0.14
IFT140-202ENST00000397417 RRS1Q15050 365 aaKnown RBP14.2□□□□□ -0.14
IFT140-202ENST00000397417 CD109Q6YHK3 1445 aa14.2□□□□□ -0.14
IFT140-202ENST00000397417 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
IFT140-202ENST00000397417 RRP1P56182 461 aaKnown RBP14.19□□□□□ -0.14
IFT140-202ENST00000397417 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
IFT140-202ENST00000397417 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
IFT140-202ENST00000397417 CHMP3Q9Y3E7 222 aa14.19□□□□□ -0.14
IFT140-202ENST00000397417 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
IFT140-202ENST00000397417 NAP1L2Q9ULW6 460 aaPredicted RBP14.19□□□□□ -0.14
IFT140-202ENST00000397417 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
IFT140-202ENST00000397417 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
IFT140-202ENST00000397417 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
IFT140-202ENST00000397417 ATP10BO94823 1461 aa14.17□□□□□ -0.14
IFT140-202ENST00000397417 NOL8Q76FK4 1167 aaKnown RBP14.17□□□□□ -0.14
IFT140-202ENST00000397417 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
IFT140-202ENST00000397417 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
IFT140-202ENST00000397417 THUMPD2Q9BTF0 503 aaKnown RBP14.16□□□□□ -0.14
IFT140-202ENST00000397417 AKNAQ7Z591 1439 aa14.16□□□□□ -0.14
IFT140-202ENST00000397417 KCNJ4P48050 445 aa14.16□□□□□ -0.14
IFT140-202ENST00000397417 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
IFT140-202ENST00000397417 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
IFT140-202ENST00000397417 STK31Q9BXU1 1019 aa14.16□□□□□ -0.14
IFT140-202ENST00000397417 EIF5BO60841 1220 aaKnown RBP14.15□□□□□ -0.14
IFT140-202ENST00000397417 BCAR3O75815 825 aa14.15□□□□□ -0.14
IFT140-202ENST00000397417 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
IFT140-202ENST00000397417 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
IFT140-202ENST00000397417 NUP153P49790 1475 aaKnown RBP14.15□□□□□ -0.14
IFT140-202ENST00000397417 IPO8O15397 1037 aaKnown RBP14.15□□□□□ -0.14
IFT140-202ENST00000397417 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
IFT140-202ENST00000397417 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.15
IFT140-202ENST00000397417 BECN1Q14457 450 aa14.14□□□□□ -0.15
IFT140-202ENST00000397417 ABTB2Q8N961 1025 aa14.14□□□□□ -0.15
IFT140-202ENST00000397417 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
IFT140-202ENST00000397417 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
IFT140-202ENST00000397417 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
IFT140-202ENST00000397417 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
IFT140-202ENST00000397417 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
IFT140-202ENST00000397417 PDE3BQ13370 1112 aa14.11□□□□□ -0.15
IFT140-202ENST00000397417 TEFQ10587 303 aa14.1□□□□□ -0.15
IFT140-202ENST00000397417 PROSER2Q86WR7 435 aaPredicted RBP14.1□□□□□ -0.15
IFT140-202ENST00000397417 E9PSI1 815 aa14.1□□□□□ -0.15
IFT140-202ENST00000397417 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
IFT140-202ENST00000397417 ANKRD45Q5TZF3 282 aa14.1□□□□□ -0.15
IFT140-202ENST00000397417 RWDD1Q9H446 243 aaPredicted RBP14.1□□□□□ -0.15
IFT140-202ENST00000397417 TRIM6-TRIM34B2RNG4 842 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 MS4A1P11836 297 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 FGD1P98174 961 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 DCTN1Q14203 1278 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 GZF1Q9H116 711 aaPredicted RBP14.09□□□□□ -0.15
IFT140-202ENST00000397417 C1orf115Q9H7X2 142 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 MSH5O43196 834 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
IFT140-202ENST00000397417 ROCK1Q13464 1354 aa14.08□□□□□ -0.15
IFT140-202ENST00000397417 EVA1CP58658 441 aa14.08□□□□□ -0.15
IFT140-202ENST00000397417 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.15
IFT140-202ENST00000397417 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
IFT140-202ENST00000397417 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
IFT140-202ENST00000397417 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
IFT140-202ENST00000397417 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
IFT140-202ENST00000397417 TRAPPC8Q9Y2L5 1435 aa14.07□□□□□ -0.16
IFT140-202ENST00000397417 FANCAO15360 1455 aa14.07□□□□□ -0.16
IFT140-202ENST00000397417 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
IFT140-202ENST00000397417 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
IFT140-202ENST00000397417 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
IFT140-202ENST00000397417 ZKSCAN2Q63HK3 967 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 LNPKQ9C0E8 428 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
IFT140-202ENST00000397417 TULP1O00294 542 aaPredicted RBP14.06□□□□□ -0.16
IFT140-202ENST00000397417 NME9Q86XW9 330 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 MAGI3Q5TCQ9 1506 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
IFT140-202ENST00000397417 CASC1Q6TDU7 716 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
IFT140-202ENST00000397417 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.06□□□□□ -0.16
IFT140-202ENST00000397417 NCKAP5LQ9HCH0 1330 aa14.06□□□□□ -0.16
IFT140-202ENST00000397417 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
IFT140-202ENST00000397417 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
IFT140-202ENST00000397417 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
IFT140-202ENST00000397417 ATF3P18847 181 aa14.05□□□□□ -0.16
IFT140-202ENST00000397417 PDE4AP27815 886 aa14.05□□□□□ -0.16
IFT140-202ENST00000397417 FOXO3O43524 673 aa14.05□□□□□ -0.16
IFT140-202ENST00000397417 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
IFT140-202ENST00000397417 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
IFT140-202ENST00000397417 USHBP1Q8N6Y0 703 aa14.04□□□□□ -0.16
IFT140-202ENST00000397417 C20orf194Q5TEA3 1177 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms