RNA–Protein interactions for RNA: ENST00000396865.6

SLC38A9-202, Transcript of solute carrier family 38 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A9, Length 2,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-202ENST00000396865 ZNF521Q96K83 1311 aa18.72■□□□□ 0.59
SLC38A9-202ENST00000396865 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
SLC38A9-202ENST00000396865 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.59
SLC38A9-202ENST00000396865 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
SLC38A9-202ENST00000396865 DMRT2Q9Y5R5 561 aa18.7■□□□□ 0.58
SLC38A9-202ENST00000396865 GOLGA6L3A6NEY3 463 aa18.7■□□□□ 0.58
SLC38A9-202ENST00000396865 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
SLC38A9-202ENST00000396865 UPF2Q9HAU5 1272 aaKnown RBP18.68■□□□□ 0.58
SLC38A9-202ENST00000396865 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
SLC38A9-202ENST00000396865 INSRP06213 1382 aa18.68■□□□□ 0.58
SLC38A9-202ENST00000396865 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
SLC38A9-202ENST00000396865 PKNOX2Q96KN3 472 aa18.67■□□□□ 0.58
SLC38A9-202ENST00000396865 TBC1D2Q9BYX2 928 aa18.67■□□□□ 0.58
SLC38A9-202ENST00000396865 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
SLC38A9-202ENST00000396865 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
SLC38A9-202ENST00000396865 KDM5DQ9BY66 1539 aa18.66■□□□□ 0.58
SLC38A9-202ENST00000396865 EIF3AQ14152 1382 aaKnown RBP18.66■□□□□ 0.58
SLC38A9-202ENST00000396865 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
SLC38A9-202ENST00000396865 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.58
SLC38A9-202ENST00000396865 GLIPR1L2Q4G1C9 344 aa18.64■□□□□ 0.58
SLC38A9-202ENST00000396865 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
SLC38A9-202ENST00000396865 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
SLC38A9-202ENST00000396865 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
SLC38A9-202ENST00000396865 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
SLC38A9-202ENST00000396865 NKTRP30414 1462 aaKnown RBP18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 TRMT2AQ8IZ69 625 aaKnown RBP18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 CGNL1Q0VF96 1302 aa18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 E9PSI1 815 aa18.62■□□□□ 0.57
SLC38A9-202ENST00000396865 A2MP01023 1474 aa18.61■□□□□ 0.57
SLC38A9-202ENST00000396865 HSP90AA2PQ14568 343 aaPredicted RBP18.61■□□□□ 0.57
SLC38A9-202ENST00000396865 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
SLC38A9-202ENST00000396865 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
SLC38A9-202ENST00000396865 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
SLC38A9-202ENST00000396865 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SLC38A9-202ENST00000396865 MCM4P33991 863 aa18.6■□□□□ 0.57
SLC38A9-202ENST00000396865 GPRASP1Q5JY77 1395 aa18.6■□□□□ 0.57
SLC38A9-202ENST00000396865 TBC1D32Q96NH3 1257 aa18.6■□□□□ 0.57
SLC38A9-202ENST00000396865 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
SLC38A9-202ENST00000396865 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
SLC38A9-202ENST00000396865 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
SLC38A9-202ENST00000396865 CDC42BPAQ5VT25 1732 aa18.59■□□□□ 0.57
SLC38A9-202ENST00000396865 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
SLC38A9-202ENST00000396865 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.57
SLC38A9-202ENST00000396865 ZMYND15Q9H091 742 aa18.58■□□□□ 0.56
SLC38A9-202ENST00000396865 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
SLC38A9-202ENST00000396865 TRAK2O60296 914 aa18.57■□□□□ 0.56
SLC38A9-202ENST00000396865 PDE3AQ14432 1141 aa18.57■□□□□ 0.56
SLC38A9-202ENST00000396865 MFAP1P55081 439 aaKnown RBP18.56■□□□□ 0.56
SLC38A9-202ENST00000396865 CLCN1P35523 988 aa18.56■□□□□ 0.56
SLC38A9-202ENST00000396865 FSD2A1L4K1 749 aa18.55■□□□□ 0.56
SLC38A9-202ENST00000396865 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
SLC38A9-202ENST00000396865 RLBP1P12271 317 aa18.55■□□□□ 0.56
SLC38A9-202ENST00000396865 PLA2R1Q13018 1463 aa18.55■□□□□ 0.56
SLC38A9-202ENST00000396865 TNNT2P45379 298 aaPredicted RBP18.54■□□□□ 0.56
SLC38A9-202ENST00000396865 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
SLC38A9-202ENST00000396865 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
SLC38A9-202ENST00000396865 ZCCHC11Q5TAX3 1644 aaKnown RBP18.53■□□□□ 0.56
SLC38A9-202ENST00000396865 WWC1Q8IX03 1113 aa18.52■□□□□ 0.56
SLC38A9-202ENST00000396865 PMFBP1Q8TBY8 1022 aa18.52■□□□□ 0.56
SLC38A9-202ENST00000396865 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.56
SLC38A9-202ENST00000396865 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
SLC38A9-202ENST00000396865 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
SLC38A9-202ENST00000396865 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
SLC38A9-202ENST00000396865 MRE11P49959 708 aa18.5■□□□□ 0.55
SLC38A9-202ENST00000396865 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
SLC38A9-202ENST00000396865 GRPEL1Q9HAV7 217 aa18.49■□□□□ 0.55
SLC38A9-202ENST00000396865 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
SLC38A9-202ENST00000396865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
SLC38A9-202ENST00000396865 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
SLC38A9-202ENST00000396865 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
SLC38A9-202ENST00000396865 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
SLC38A9-202ENST00000396865 ESPNB1AK53 854 aa18.47■□□□□ 0.55
SLC38A9-202ENST00000396865 TRIM44Q96DX7 344 aaPredicted RBP18.47■□□□□ 0.55
SLC38A9-202ENST00000396865 RRP9O43818 475 aaKnown RBP18.47■□□□□ 0.55
SLC38A9-202ENST00000396865 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
SLC38A9-202ENST00000396865 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
SLC38A9-202ENST00000396865 PIK3C2GO75747 1445 aa18.45■□□□□ 0.54
SLC38A9-202ENST00000396865 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
SLC38A9-202ENST00000396865 HSCBQ8IWL3 235 aa18.44■□□□□ 0.54
SLC38A9-202ENST00000396865 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
SLC38A9-202ENST00000396865 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
SLC38A9-202ENST00000396865 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
SLC38A9-202ENST00000396865 SAMD9LQ8IVG5 1584 aa18.43■□□□□ 0.54
SLC38A9-202ENST00000396865 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
SLC38A9-202ENST00000396865 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
SLC38A9-202ENST00000396865 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
SLC38A9-202ENST00000396865 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
SLC38A9-202ENST00000396865 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
SLC38A9-202ENST00000396865 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
SLC38A9-202ENST00000396865 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.54
SLC38A9-202ENST00000396865 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
SLC38A9-202ENST00000396865 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
SLC38A9-202ENST00000396865 EIF2AK4Q9P2K8 1649 aaKnown RBP18.37■□□□□ 0.53
SLC38A9-202ENST00000396865 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
SLC38A9-202ENST00000396865 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
SLC38A9-202ENST00000396865 LAMC1P11047 1609 aa18.36■□□□□ 0.53
SLC38A9-202ENST00000396865 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
SLC38A9-202ENST00000396865 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms