RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CLSPNQ9HAW4 1339 aa23.95■■□□□ 1.42
AP1S3-202ENST00000396653 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
AP1S3-202ENST00000396653 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
AP1S3-202ENST00000396653 IQGAP1P46940 1657 aa23.94■■□□□ 1.42
AP1S3-202ENST00000396653 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
AP1S3-202ENST00000396653 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.42
AP1S3-202ENST00000396653 EID1Q9Y6B2 187 aa23.93■■□□□ 1.42
AP1S3-202ENST00000396653 ZNF326Q5BKZ1 582 aaKnown RBP23.92■■□□□ 1.42
AP1S3-202ENST00000396653 TXNDC2Q86VQ3 553 aa23.9■■□□□ 1.42
AP1S3-202ENST00000396653 LTKP29376 864 aa23.89■■□□□ 1.41
AP1S3-202ENST00000396653 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
AP1S3-202ENST00000396653 NCKAP5LQ9HCH0 1330 aa23.88■■□□□ 1.41
AP1S3-202ENST00000396653 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
AP1S3-202ENST00000396653 MYOM2P54296 1465 aa23.87■■□□□ 1.41
AP1S3-202ENST00000396653 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
AP1S3-202ENST00000396653 SETBP1Q9Y6X0 1596 aa23.86■■□□□ 1.41
AP1S3-202ENST00000396653 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
AP1S3-202ENST00000396653 DIP2AQ14689 1571 aa23.85■■□□□ 1.41
AP1S3-202ENST00000396653 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
AP1S3-202ENST00000396653 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
AP1S3-202ENST00000396653 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
AP1S3-202ENST00000396653 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
AP1S3-202ENST00000396653 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
AP1S3-202ENST00000396653 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
AP1S3-202ENST00000396653 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
AP1S3-202ENST00000396653 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
AP1S3-202ENST00000396653 LAMC1P11047 1609 aa23.78■■□□□ 1.4
AP1S3-202ENST00000396653 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
AP1S3-202ENST00000396653 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
AP1S3-202ENST00000396653 PIK3C2GO75747 1445 aa23.77■■□□□ 1.4
AP1S3-202ENST00000396653 ADAMTS13Q76LX8 1427 aa23.77■■□□□ 1.4
AP1S3-202ENST00000396653 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
AP1S3-202ENST00000396653 TONSLQ96HA7 1378 aa23.74■■□□□ 1.39
AP1S3-202ENST00000396653 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
AP1S3-202ENST00000396653 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
AP1S3-202ENST00000396653 KIAA1210Q9ULL0 1709 aa23.72■■□□□ 1.39
AP1S3-202ENST00000396653 CHD2O14647 1828 aaKnown RBP23.71■■□□□ 1.39
AP1S3-202ENST00000396653 L3MBTL2Q969R5 705 aa23.71■■□□□ 1.39
AP1S3-202ENST00000396653 TBX22Q9Y458 520 aa23.71■■□□□ 1.39
AP1S3-202ENST00000396653 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
AP1S3-202ENST00000396653 PIK3R4Q99570 1358 aa23.7■■□□□ 1.38
AP1S3-202ENST00000396653 BCANQ96GW7 911 aa23.7■■□□□ 1.38
AP1S3-202ENST00000396653 TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
AP1S3-202ENST00000396653 PRAG1Q86YV5 1406 aa23.68■■□□□ 1.38
AP1S3-202ENST00000396653 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
AP1S3-202ENST00000396653 STRCP1A6NGW2 1772 aa23.66■■□□□ 1.38
AP1S3-202ENST00000396653 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
AP1S3-202ENST00000396653 XRN1Q8IZH2 1706 aaKnown RBP23.64■■□□□ 1.38
AP1S3-202ENST00000396653 ASXL1Q8IXJ9 1541 aa23.64■■□□□ 1.38
AP1S3-202ENST00000396653 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
AP1S3-202ENST00000396653 C14orf93Q9H972 538 aaKnown RBP23.63■■□□□ 1.37
AP1S3-202ENST00000396653 CPS1P31327 1500 aa23.63■■□□□ 1.37
AP1S3-202ENST00000396653 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
AP1S3-202ENST00000396653 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
AP1S3-202ENST00000396653 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
AP1S3-202ENST00000396653 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
AP1S3-202ENST00000396653 METP08581 1390 aa23.6■■□□□ 1.37
AP1S3-202ENST00000396653 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
AP1S3-202ENST00000396653 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
AP1S3-202ENST00000396653 KCNA6P17658 529 aa23.58■■□□□ 1.37
AP1S3-202ENST00000396653 PTPRUQ92729 1446 aa23.58■■□□□ 1.36
AP1S3-202ENST00000396653 CFAP70Q5T0N1 1121 aa23.57■■□□□ 1.36
AP1S3-202ENST00000396653 TECPR2O15040 1411 aa23.54■■□□□ 1.36
AP1S3-202ENST00000396653 PTCH1Q13635 1447 aa23.54■■□□□ 1.36
AP1S3-202ENST00000396653 RALGAPBQ86X10 1494 aa23.54■■□□□ 1.36
AP1S3-202ENST00000396653 LRPPRCP42704 1394 aaKnown RBP23.53■■□□□ 1.36
AP1S3-202ENST00000396653 YTHDC2Q9H6S0 1430 aaKnown RBP23.53■■□□□ 1.36
AP1S3-202ENST00000396653 DLC1Q96QB1 1528 aa23.51■■□□□ 1.35
AP1S3-202ENST00000396653 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
AP1S3-202ENST00000396653 XIRP1Q702N8 1843 aaKnown RBP23.51■■□□□ 1.35
AP1S3-202ENST00000396653 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
AP1S3-202ENST00000396653 LRRC7Q96NW7 1537 aa23.5■■□□□ 1.35
AP1S3-202ENST00000396653 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
AP1S3-202ENST00000396653 IQSEC2Q5JU85 1478 aa23.49■■□□□ 1.35
AP1S3-202ENST00000396653 GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
AP1S3-202ENST00000396653 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
AP1S3-202ENST00000396653 TMEM132EQ6IEE7 984 aa23.48■■□□□ 1.35
AP1S3-202ENST00000396653 NCOA3Q9Y6Q9 1424 aa23.46■■□□□ 1.35
AP1S3-202ENST00000396653 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
AP1S3-202ENST00000396653 ROCK2O75116 1388 aaKnown RBP23.45■■□□□ 1.34
AP1S3-202ENST00000396653 ROBO2Q9HCK4 1378 aa23.43■■□□□ 1.34
AP1S3-202ENST00000396653 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
AP1S3-202ENST00000396653 SIRT1Q96EB6 747 aa23.43■■□□□ 1.34
AP1S3-202ENST00000396653 TMEM94Q12767 1356 aa23.41■■□□□ 1.34
AP1S3-202ENST00000396653 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
AP1S3-202ENST00000396653 NALCNQ8IZF0 1738 aa23.41■■□□□ 1.34
AP1S3-202ENST00000396653 STK26Q9P289 416 aa23.4■■□□□ 1.34
AP1S3-202ENST00000396653 ADGRL3Q9HAR2 1447 aa23.37■■□□□ 1.33
AP1S3-202ENST00000396653 CERKQ8TCT0 537 aa23.37■■□□□ 1.33
AP1S3-202ENST00000396653 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
AP1S3-202ENST00000396653 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
AP1S3-202ENST00000396653 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
AP1S3-202ENST00000396653 DCCP43146 1447 aa23.34■■□□□ 1.33
AP1S3-202ENST00000396653 CARD11Q9BXL7 1154 aa23.34■■□□□ 1.33
AP1S3-202ENST00000396653 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
AP1S3-202ENST00000396653 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
AP1S3-202ENST00000396653 CDC42BPGQ6DT37 1551 aa23.33■■□□□ 1.33
AP1S3-202ENST00000396653 PLEKHH1Q9ULM0 1364 aa23.33■■□□□ 1.33
AP1S3-202ENST00000396653 MSH6P52701 1360 aa23.32■■□□□ 1.32
AP1S3-202ENST00000396653 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms