RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 HECW2Q9P2P5 1572 aa22.37■■□□□ 1.17
TRIM39-205ENST00000396551 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
TRIM39-205ENST00000396551 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
TRIM39-205ENST00000396551 PPP4R2Q9NY27 417 aa22.36■■□□□ 1.17
TRIM39-205ENST00000396551 MYOM2P54296 1465 aa22.36■■□□□ 1.17
TRIM39-205ENST00000396551 MYOM1P52179 1685 aa22.33■■□□□ 1.17
TRIM39-205ENST00000396551 RNF123Q5XPI4 1314 aa22.32■■□□□ 1.16
TRIM39-205ENST00000396551 SYNMO15061 1565 aa22.32■■□□□ 1.16
TRIM39-205ENST00000396551 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
TRIM39-205ENST00000396551 CFAP65Q6ZU64 1925 aaKnown RBP22.3■■□□□ 1.16
TRIM39-205ENST00000396551 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
TRIM39-205ENST00000396551 CFAP70Q5T0N1 1121 aa22.29■■□□□ 1.16
TRIM39-205ENST00000396551 NRXN1Q9ULB1 1477 aa22.29■■□□□ 1.16
TRIM39-205ENST00000396551 NPATQ14207 1427 aa22.29■■□□□ 1.16
TRIM39-205ENST00000396551 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
TRIM39-205ENST00000396551 EIF3AQ14152 1382 aaKnown RBP22.27■■□□□ 1.16
TRIM39-205ENST00000396551 RBM19Q9Y4C8 960 aaKnown RBP22.27■■□□□ 1.15
TRIM39-205ENST00000396551 NEO1Q92859 1461 aa22.26■■□□□ 1.15
TRIM39-205ENST00000396551 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
TRIM39-205ENST00000396551 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
TRIM39-205ENST00000396551 GGT6Q6P531 493 aa22.25■■□□□ 1.15
TRIM39-205ENST00000396551 ABCC3O15438 1527 aa22.25■■□□□ 1.15
TRIM39-205ENST00000396551 CDCA8Q53HL2 280 aa22.24■■□□□ 1.15
TRIM39-205ENST00000396551 PPLO60437 1756 aa22.24■■□□□ 1.15
TRIM39-205ENST00000396551 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
TRIM39-205ENST00000396551 NOS1P29475 1434 aa22.23■■□□□ 1.15
TRIM39-205ENST00000396551 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
TRIM39-205ENST00000396551 RAPGEF3O95398 923 aa22.23■■□□□ 1.15
TRIM39-205ENST00000396551 AMER1Q5JTC6 1135 aaPredicted RBP22.22■■□□□ 1.15
TRIM39-205ENST00000396551 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 ERVK-7P63135 1459 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 SIGLEC1Q9BZZ2 1709 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 INSRP06213 1382 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 CAMSAP1Q5T5Y3 1602 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 MYO3AQ8NEV4 1616 aa22.22■■□□□ 1.15
TRIM39-205ENST00000396551 RICTORQ6R327 1708 aa22.21■■□□□ 1.15
TRIM39-205ENST00000396551 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
TRIM39-205ENST00000396551 ASXL1Q8IXJ9 1541 aa22.21■■□□□ 1.15
TRIM39-205ENST00000396551 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
TRIM39-205ENST00000396551 SETBP1Q9Y6X0 1596 aa22.19■■□□□ 1.14
TRIM39-205ENST00000396551 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
TRIM39-205ENST00000396551 PPP2R1AP30153 589 aa22.17■■□□□ 1.14
TRIM39-205ENST00000396551 PIK3C2GO75747 1445 aa22.16■■□□□ 1.14
TRIM39-205ENST00000396551 PIK3C2BO00750 1634 aa22.15■■□□□ 1.14
TRIM39-205ENST00000396551 PDE3BQ13370 1112 aa22.14■■□□□ 1.14
TRIM39-205ENST00000396551 ZC3H13Q5T200 1668 aaKnown RBP22.14■■□□□ 1.13
TRIM39-205ENST00000396551 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.13
TRIM39-205ENST00000396551 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
TRIM39-205ENST00000396551 CDCA7LQ96GN5 454 aa22.12■■□□□ 1.13
TRIM39-205ENST00000396551 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
TRIM39-205ENST00000396551 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
TRIM39-205ENST00000396551 YEATS2Q9ULM3 1422 aa22.1■■□□□ 1.13
TRIM39-205ENST00000396551 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
TRIM39-205ENST00000396551 QRICH2Q9H0J4 1663 aa22.1■■□□□ 1.13
TRIM39-205ENST00000396551 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
TRIM39-205ENST00000396551 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
TRIM39-205ENST00000396551 GLI2P10070 1586 aa22.09■■□□□ 1.13
TRIM39-205ENST00000396551 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
TRIM39-205ENST00000396551 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.12
TRIM39-205ENST00000396551 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.12
TRIM39-205ENST00000396551 CARD14Q9BXL6 1004 aa22.07■■□□□ 1.12
TRIM39-205ENST00000396551 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
TRIM39-205ENST00000396551 ARHGAP31Q2M1Z3 1444 aa22.06■■□□□ 1.12
TRIM39-205ENST00000396551 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
TRIM39-205ENST00000396551 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
TRIM39-205ENST00000396551 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
TRIM39-205ENST00000396551 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
TRIM39-205ENST00000396551 WDR43Q15061 677 aaKnown RBP eCLIP22.02■■□□□ 1.12
TRIM39-205ENST00000396551 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
TRIM39-205ENST00000396551 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
TRIM39-205ENST00000396551 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
TRIM39-205ENST00000396551 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
TRIM39-205ENST00000396551 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
TRIM39-205ENST00000396551 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
TRIM39-205ENST00000396551 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
TRIM39-205ENST00000396551 PREX1Q8TCU6 1659 aa22■■□□□ 1.11
TRIM39-205ENST00000396551 EXOC6Q8TAG9 804 aa21.98■■□□□ 1.11
TRIM39-205ENST00000396551 DIP2BQ9P265 1576 aa21.98■■□□□ 1.11
TRIM39-205ENST00000396551 IDI1Q13907 227 aa21.98■■□□□ 1.11
TRIM39-205ENST00000396551 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
TRIM39-205ENST00000396551 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
TRIM39-205ENST00000396551 TMEM131LA2VDJ0 1609 aa21.94■■□□□ 1.1
TRIM39-205ENST00000396551 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
TRIM39-205ENST00000396551 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
TRIM39-205ENST00000396551 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
TRIM39-205ENST00000396551 TULP4Q9NRJ4 1543 aa21.93■■□□□ 1.1
TRIM39-205ENST00000396551 SLC12A5Q9H2X9 1139 aa21.93■■□□□ 1.1
TRIM39-205ENST00000396551 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
TRIM39-205ENST00000396551 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
TRIM39-205ENST00000396551 MSH5O43196 834 aa21.91■■□□□ 1.1
TRIM39-205ENST00000396551 SLC52A1Q9NWF4 448 aa21.91■■□□□ 1.1
TRIM39-205ENST00000396551 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
TRIM39-205ENST00000396551 USP32Q8NFA0 1604 aa21.91■■□□□ 1.1
TRIM39-205ENST00000396551 PLIN1O60240 522 aa21.9■■□□□ 1.1
TRIM39-205ENST00000396551 DUSP27Q5VZP5 1158 aa21.9■■□□□ 1.1
TRIM39-205ENST00000396551 ANP32EQ9BTT0 268 aa21.89■■□□□ 1.1
TRIM39-205ENST00000396551 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
TRIM39-205ENST00000396551 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
TRIM39-205ENST00000396551 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
TRIM39-205ENST00000396551 FBXO31Q5XUX0 539 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms