RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SYNMO15061 1565 aa22.72■■□□□ 1.23
NUP50-202ENST00000396096 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
NUP50-202ENST00000396096 ZMYM4Q5VZL5 1548 aa22.71■■□□□ 1.23
NUP50-202ENST00000396096 PANK3Q9H999 370 aa22.71■■□□□ 1.23
NUP50-202ENST00000396096 INSRP06213 1382 aa22.7■■□□□ 1.22
NUP50-202ENST00000396096 CDCA8Q53HL2 280 aa22.7■■□□□ 1.22
NUP50-202ENST00000396096 ABCC3O15438 1527 aa22.69■■□□□ 1.22
NUP50-202ENST00000396096 NPATQ14207 1427 aa22.69■■□□□ 1.22
NUP50-202ENST00000396096 NUDCQ9Y266 331 aa22.68■■□□□ 1.22
NUP50-202ENST00000396096 RICTORQ6R327 1708 aa22.68■■□□□ 1.22
NUP50-202ENST00000396096 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
NUP50-202ENST00000396096 GLI2P10070 1586 aa22.67■■□□□ 1.22
NUP50-202ENST00000396096 MYOM1P52179 1685 aa22.67■■□□□ 1.22
NUP50-202ENST00000396096 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
NUP50-202ENST00000396096 CAMSAP1Q5T5Y3 1602 aa22.66■■□□□ 1.22
NUP50-202ENST00000396096 PPLO60437 1756 aa22.66■■□□□ 1.22
NUP50-202ENST00000396096 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
NUP50-202ENST00000396096 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
NUP50-202ENST00000396096 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
NUP50-202ENST00000396096 RNF123Q5XPI4 1314 aa22.63■■□□□ 1.21
NUP50-202ENST00000396096 ADGRF5Q8IZF2 1346 aa22.63■■□□□ 1.21
NUP50-202ENST00000396096 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
NUP50-202ENST00000396096 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
NUP50-202ENST00000396096 ZC3H13Q5T200 1668 aaKnown RBP22.62■■□□□ 1.21
NUP50-202ENST00000396096 PIK3C2BO00750 1634 aa22.61■■□□□ 1.21
NUP50-202ENST00000396096 NOS1P29475 1434 aa22.6■■□□□ 1.21
NUP50-202ENST00000396096 CFAP70Q5T0N1 1121 aa22.6■■□□□ 1.21
NUP50-202ENST00000396096 SBNO2Q9Y2G9 1366 aa22.59■■□□□ 1.21
NUP50-202ENST00000396096 SIGLEC1Q9BZZ2 1709 aa22.59■■□□□ 1.21
NUP50-202ENST00000396096 CC2D1BQ5T0F9 858 aaKnown RBP22.59■■□□□ 1.21
NUP50-202ENST00000396096 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
NUP50-202ENST00000396096 GGT6Q6P531 493 aa22.58■■□□□ 1.21
NUP50-202ENST00000396096 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.2
NUP50-202ENST00000396096 ARHGAP31Q2M1Z3 1444 aa22.58■■□□□ 1.2
NUP50-202ENST00000396096 ASXL1Q8IXJ9 1541 aa22.58■■□□□ 1.2
NUP50-202ENST00000396096 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
NUP50-202ENST00000396096 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
NUP50-202ENST00000396096 ERVK-7P63135 1459 aa22.57■■□□□ 1.2
NUP50-202ENST00000396096 RAPGEF3O95398 923 aa22.57■■□□□ 1.2
NUP50-202ENST00000396096 CFAP65Q6ZU64 1925 aaKnown RBP22.57■■□□□ 1.2
NUP50-202ENST00000396096 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
NUP50-202ENST00000396096 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
NUP50-202ENST00000396096 PDE3BQ13370 1112 aa22.53■■□□□ 1.2
NUP50-202ENST00000396096 ADGRB1O14514 1584 aa22.53■■□□□ 1.2
NUP50-202ENST00000396096 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
NUP50-202ENST00000396096 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
NUP50-202ENST00000396096 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
NUP50-202ENST00000396096 C14orf93Q9H972 538 aaKnown RBP22.5■■□□□ 1.19
NUP50-202ENST00000396096 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
NUP50-202ENST00000396096 DIP2BQ9P265 1576 aa22.48■■□□□ 1.19
NUP50-202ENST00000396096 NEXMIFQ5QGS0 1516 aa22.48■■□□□ 1.19
NUP50-202ENST00000396096 PPP2R1AP30153 589 aa22.47■■□□□ 1.19
NUP50-202ENST00000396096 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
NUP50-202ENST00000396096 QRICH2Q9H0J4 1663 aa22.46■■□□□ 1.19
NUP50-202ENST00000396096 CENPJQ9HC77 1338 aaPredicted RBP22.45■■□□□ 1.18
NUP50-202ENST00000396096 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
NUP50-202ENST00000396096 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
NUP50-202ENST00000396096 ZFYVE9O95405 1425 aa22.43■■□□□ 1.18
NUP50-202ENST00000396096 REREQ9P2R6 1566 aa22.43■■□□□ 1.18
NUP50-202ENST00000396096 SENP3-EIF4A1A0A087X0R7 540 aa22.41■■□□□ 1.18
NUP50-202ENST00000396096 SLC52A1Q9NWF4 448 aa22.39■■□□□ 1.18
NUP50-202ENST00000396096 RBM19Q9Y4C8 960 aaKnown RBP22.39■■□□□ 1.18
NUP50-202ENST00000396096 ARHGEF28Q8N1W1 1705 aaKnown RBP22.39■■□□□ 1.18
NUP50-202ENST00000396096 VGFO15240 615 aaPredicted RBP22.39■■□□□ 1.17
NUP50-202ENST00000396096 B4GALNT3Q6L9W6 998 aa22.38■■□□□ 1.17
NUP50-202ENST00000396096 TMEM131LA2VDJ0 1609 aa22.37■■□□□ 1.17
NUP50-202ENST00000396096 AGLP35573 1532 aa22.37■■□□□ 1.17
NUP50-202ENST00000396096 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
NUP50-202ENST00000396096 PUS7Q96PZ0 661 aaKnown RBP22.36■■□□□ 1.17
NUP50-202ENST00000396096 CARD14Q9BXL6 1004 aa22.36■■□□□ 1.17
NUP50-202ENST00000396096 USP32Q8NFA0 1604 aa22.36■■□□□ 1.17
NUP50-202ENST00000396096 MYO5BQ9ULV0 1848 aa22.35■■□□□ 1.17
NUP50-202ENST00000396096 RCAN3Q9UKA8 241 aa22.35■■□□□ 1.17
NUP50-202ENST00000396096 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
NUP50-202ENST00000396096 IDI1Q13907 227 aa22.34■■□□□ 1.17
NUP50-202ENST00000396096 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
NUP50-202ENST00000396096 RRP1P56182 461 aaKnown RBP22.34■■□□□ 1.17
NUP50-202ENST00000396096 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
NUP50-202ENST00000396096 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
NUP50-202ENST00000396096 TSPOAP1O95153 1857 aa22.31■■□□□ 1.16
NUP50-202ENST00000396096 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
NUP50-202ENST00000396096 CDCA7LQ96GN5 454 aa22.3■■□□□ 1.16
NUP50-202ENST00000396096 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
NUP50-202ENST00000396096 TULP4Q9NRJ4 1543 aa22.29■■□□□ 1.16
NUP50-202ENST00000396096 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
NUP50-202ENST00000396096 NSD3Q9BZ95 1437 aa22.26■■□□□ 1.15
NUP50-202ENST00000396096 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
NUP50-202ENST00000396096 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
NUP50-202ENST00000396096 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
NUP50-202ENST00000396096 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
NUP50-202ENST00000396096 CLTCQ00610 1675 aaKnown RBP22.22■■□□□ 1.15
NUP50-202ENST00000396096 NUTM2DQ5VT03 806 aaPredicted RBP22.22■■□□□ 1.15
NUP50-202ENST00000396096 SLC12A5Q9H2X9 1139 aa22.22■■□□□ 1.15
NUP50-202ENST00000396096 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
NUP50-202ENST00000396096 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
NUP50-202ENST00000396096 PTPRMP28827 1452 aa22.2■■□□□ 1.14
NUP50-202ENST00000396096 SHPRHQ149N8 1683 aa22.2■■□□□ 1.14
NUP50-202ENST00000396096 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.14
NUP50-202ENST00000396096 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
NUP50-202ENST00000396096 ARHGEF40Q8TER5 1519 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms