RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
HERPUD2-202ENST00000396081 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.33
HERPUD2-202ENST00000396081 E9PSI1 815 aa23.32■■□□□ 1.32
HERPUD2-202ENST00000396081 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
HERPUD2-202ENST00000396081 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
HERPUD2-202ENST00000396081 CGNL1Q0VF96 1302 aa23.31■■□□□ 1.32
HERPUD2-202ENST00000396081 CDC42BPAQ5VT25 1732 aa23.31■■□□□ 1.32
HERPUD2-202ENST00000396081 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
HERPUD2-202ENST00000396081 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
HERPUD2-202ENST00000396081 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
HERPUD2-202ENST00000396081 PLA2R1Q13018 1463 aa23.29■■□□□ 1.32
HERPUD2-202ENST00000396081 CARMIL2Q6F5E8 1435 aa23.29■■□□□ 1.32
HERPUD2-202ENST00000396081 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
HERPUD2-202ENST00000396081 TRMT2AQ8IZ69 625 aaKnown RBP23.28■■□□□ 1.32
HERPUD2-202ENST00000396081 NAP1L5Q96NT1 182 aaPredicted RBP23.28■■□□□ 1.32
HERPUD2-202ENST00000396081 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
HERPUD2-202ENST00000396081 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
HERPUD2-202ENST00000396081 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
HERPUD2-202ENST00000396081 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 GOLGA6L3A6NEY3 463 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
HERPUD2-202ENST00000396081 RRP7AQ9Y3A4 280 aaKnown RBP23.23■■□□□ 1.31
HERPUD2-202ENST00000396081 ATP10BO94823 1461 aa23.23■■□□□ 1.31
HERPUD2-202ENST00000396081 PANK2Q9BZ23 570 aa23.22■■□□□ 1.31
HERPUD2-202ENST00000396081 XRCC6P12956 609 aaKnown RBP eCLIP23.22■■□□□ 1.31
HERPUD2-202ENST00000396081 ANTXR1Q9H6X2 564 aa23.22■■□□□ 1.31
HERPUD2-202ENST00000396081 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
HERPUD2-202ENST00000396081 CCDC141Q6ZP82 1450 aa23.21■■□□□ 1.31
HERPUD2-202ENST00000396081 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
HERPUD2-202ENST00000396081 TNNQ9UQP3 1299 aa23.21■■□□□ 1.31
HERPUD2-202ENST00000396081 PDZRN3Q9UPQ7 1066 aa23.2■■□□□ 1.3
HERPUD2-202ENST00000396081 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
HERPUD2-202ENST00000396081 PCDHB15Q9Y5E8 787 aa23.19■■□□□ 1.3
HERPUD2-202ENST00000396081 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
HERPUD2-202ENST00000396081 TBC1D32Q96NH3 1257 aa23.19■■□□□ 1.3
HERPUD2-202ENST00000396081 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
HERPUD2-202ENST00000396081 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
HERPUD2-202ENST00000396081 MCM4P33991 863 aa23.17■■□□□ 1.3
HERPUD2-202ENST00000396081 WWC1Q8IX03 1113 aa23.17■■□□□ 1.3
HERPUD2-202ENST00000396081 PIK3C2GO75747 1445 aa23.16■■□□□ 1.3
HERPUD2-202ENST00000396081 ASXL1Q8IXJ9 1541 aa23.15■■□□□ 1.3
HERPUD2-202ENST00000396081 RLBP1P12271 317 aa23.14■■□□□ 1.3
HERPUD2-202ENST00000396081 MFAP1P55081 439 aaKnown RBP23.14■■□□□ 1.3
HERPUD2-202ENST00000396081 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
HERPUD2-202ENST00000396081 NUP160Q12769 1436 aa23.13■■□□□ 1.29
HERPUD2-202ENST00000396081 TRAK2O60296 914 aa23.11■■□□□ 1.29
HERPUD2-202ENST00000396081 RARSP54136 660 aaKnown RBP23.11■■□□□ 1.29
HERPUD2-202ENST00000396081 RWDD1Q9H446 243 aaPredicted RBP23.1■■□□□ 1.29
HERPUD2-202ENST00000396081 LAMC1P11047 1609 aa23.1■■□□□ 1.29
HERPUD2-202ENST00000396081 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
HERPUD2-202ENST00000396081 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
HERPUD2-202ENST00000396081 GLIPR1L2Q4G1C9 344 aa23.1■■□□□ 1.29
HERPUD2-202ENST00000396081 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
HERPUD2-202ENST00000396081 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.29
HERPUD2-202ENST00000396081 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
HERPUD2-202ENST00000396081 CHMP5Q9NZZ3 219 aa23.07■■□□□ 1.28
HERPUD2-202ENST00000396081 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
HERPUD2-202ENST00000396081 SAMD9LQ8IVG5 1584 aa23.07■■□□□ 1.28
HERPUD2-202ENST00000396081 SYCP2Q9BX26 1530 aa23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 FSD2A1L4K1 749 aa23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 HSP90AA1P07900 732 aaKnown RBP23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 ABCA8O94911 1581 aa23.06■■□□□ 1.28
HERPUD2-202ENST00000396081 VSIG10Q8N0Z9 540 aa23.05■■□□□ 1.28
HERPUD2-202ENST00000396081 TCP11L2Q8N4U5 519 aa23.05■■□□□ 1.28
HERPUD2-202ENST00000396081 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 CLCN1P35523 988 aa23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 HSP90AA2PQ14568 343 aaPredicted RBP23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 PKNOX2Q96KN3 472 aa23.04■■□□□ 1.28
HERPUD2-202ENST00000396081 SCAF11Q99590 1463 aaKnown RBP23.03■■□□□ 1.28
HERPUD2-202ENST00000396081 VIRMAQ69YN4 1812 aaKnown RBP23.03■■□□□ 1.28
HERPUD2-202ENST00000396081 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
HERPUD2-202ENST00000396081 ARHGAP5Q13017 1502 aa23.02■■□□□ 1.28
HERPUD2-202ENST00000396081 MRE11P49959 708 aa23.02■■□□□ 1.28
HERPUD2-202ENST00000396081 HSCBQ8IWL3 235 aa23.02■■□□□ 1.28
HERPUD2-202ENST00000396081 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
HERPUD2-202ENST00000396081 NPC1L1Q9UHC9 1359 aa23■■□□□ 1.27
HERPUD2-202ENST00000396081 SYNMO15061 1565 aa23■■□□□ 1.27
HERPUD2-202ENST00000396081 RUNDC1Q96C34 613 aa23■■□□□ 1.27
HERPUD2-202ENST00000396081 GRPEL1Q9HAV7 217 aa22.99■■□□□ 1.27
HERPUD2-202ENST00000396081 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
HERPUD2-202ENST00000396081 UNC13BO14795 1591 aa22.96■■□□□ 1.27
HERPUD2-202ENST00000396081 AAMPQ13685 434 aa22.95■■□□□ 1.27
HERPUD2-202ENST00000396081 MVPQ14764 893 aaKnown RBP22.95■■□□□ 1.27
HERPUD2-202ENST00000396081 ESPNB1AK53 854 aa22.95■■□□□ 1.26
HERPUD2-202ENST00000396081 CDC42BPBQ9Y5S2 1711 aa22.95■■□□□ 1.26
HERPUD2-202ENST00000396081 DDX11L8A8MPP1 907 aa22.94■■□□□ 1.26
HERPUD2-202ENST00000396081 DZIP1LQ8IYY4 767 aaKnown RBP22.94■■□□□ 1.26
HERPUD2-202ENST00000396081 ZKSCAN2Q63HK3 967 aa22.93■■□□□ 1.26
HERPUD2-202ENST00000396081 FOXD4L1Q9NU39 408 aa22.93■■□□□ 1.26
HERPUD2-202ENST00000396081 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
HERPUD2-202ENST00000396081 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
HERPUD2-202ENST00000396081 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms